Csor042860.1
Basic Information
- Insect
- Cosmopolites sordidus
- Gene Symbol
- nfxl1
- Assembly
- GCA_031761425.1
- Location
- JARFXV010001710.1:388905-393806[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 5.2e+04 -7.8 5.6 15 19 166 170 165 170 0.81 2 19 0.13 3.4e+03 -0.3 0.4 4 10 201 207 200 207 0.95 3 19 1.4e-07 0.0036 18.8 17.3 1 19 215 232 215 232 0.99 4 19 1.5e-08 0.0004 21.8 14.8 1 19 268 286 262 286 0.85 5 19 1.4 3.5e+04 -3.6 1.0 6 10 311 315 310 315 0.88 6 19 3.7e-09 9.7e-05 23.8 10.2 1 18 321 338 321 339 0.97 7 19 1.3 3.3e+04 -3.5 1.0 5 10 363 368 363 368 0.86 8 19 2e-05 0.51 11.9 8.2 1 18 374 391 374 392 0.96 9 19 1 2.6e+04 -3.1 1.3 1 4 401 404 401 404 0.97 10 19 0.0083 2.2e+02 3.5 16.1 1 18 426 443 426 444 0.94 11 19 1.4e-10 3.7e-06 28.3 13.3 1 19 453 471 453 471 0.98 12 19 0.74 1.9e+04 -2.7 1.3 5 10 499 504 499 504 0.91 13 19 0.00018 4.6 8.8 6.2 9 19 519 529 517 529 0.90 14 19 0.15 3.9e+03 -0.5 4.0 1 12 539 549 539 549 0.89 15 19 2 5.2e+04 -4.8 4.6 16 19 576 579 574 582 0.55 16 19 0.0012 30 6.2 5.2 1 11 618 628 612 632 0.90 17 19 0.35 9.2e+03 -1.7 1.2 5 10 645 650 645 650 0.93 18 19 2.5e-06 0.065 14.7 16.4 3 19 659 675 658 675 0.94 19 19 6.2e-06 0.16 13.5 13.0 1 18 718 737 718 738 0.90
Sequence Information
- Coding Sequence
- ATGAGCAATAATCGGCCTAAATCAAACccttggaataaaaataattctactcaaaagcaaaaaaaaacttctgtTTCTTCCTTGGGGCCTAACATAAATTCATCTGGCGAAGTGAAATTTAAAGAAGCAcaaacaaaattacaaaatgcTGTTAAAAAGCATATTAAAGACTATGAATCTTCATCAGAAGAAGAAGACATAGATTCTACCAATGTTATAGACGAAATTCTCAAGCAGTATGCCAAAACTGGTGGAACAAATGATCAACTTTCTCGAACTCAAATCTTTATTGAAGAATCATTTTTATCTGGTGCAACAACTTGTCTTATTTGCATTTCTAGAGTAAAGAGAGATGATCAGatatggAGTTGCCTTAATTGCCATGGAGGCTTTCACTTAAACTGTATCCAAAGATGGTCTAAAGACACTGTAATCCAACTAAAACAAAGAATAGAAGAACAAACCATATCAAAAGAAAAGAAGTTACATTGGTGTTGTCCAAAATGCAGATATGAATATAATCCAGAGCAGATTCCTActaaatatgtttgtttttgtgGAAAAGCTGAAAACCCAAAATATCAACCATTTTTGGTGCCTCATAGTTGTGGAGAGATATGTAGAAAAGATTTACTGCCACAGTGTGGACATCAATGTCTTTTACTTTGTCATCCAGGACCATGTCCACCTTGTCCAGTGACTGTTAGTGTTACCTGTTTCTGTGGTTCTCAACTGCCAGTAACAAAAAGATGTAGCTTTAAAGGTTGGTCATGCGGTAGTAGATGTGGCAAGGAATTATCATGCCGAAGACACACTTGTAGTGAACCATGTCATGATGGAAACTGCCAACCATGTTCAAAGAAAAGtatacaaaaatgtatgtgtgGCTCCAGTCAAAAGCTAAGGGATTGTAATTCTCCCATTTGGCAATGtgataagGTGTGTGGGAAATCTCTTGATTGTGGTAAACATAAATGTGAAAATGTCTGTCATGCCGGAGTCTGTAACTCATGCTTGTTAGCACAACCTAGAACCTGTCCTTGTggtaaaacaaaatatcaacTGCCTTGTACAGAAGAAGTTCCAACTTGTCCAGATACATGTGGAAAGTTGTTGGAATGTGGAATCCATTCTTGCAACTACAGATGCCATAAAGATAAATGTGGTTTGtgtcTGGAAATTGTAACTAAAGCCTGCAGATGTGGACAGcatataaaagaaatacaatGCTGTAAACAGTATTTATGTGACACTAAATGTAAGAGGTTAAGAGACTGCAACAAGCATCCTTGCAACAGAAAATGTTGTGACAACAATTGTCCACCTTGTGAAAAACCCTGTGGGCAGACATTACAATGTGGAAATCACAAATGTCAGTCAGTTTGTCATCGAGGCCCCTGTTTTCCATGCCAGCAGACAAATACTGTTTCATGTAGATGTGGAAGTACTAAAATCACCGTGCCTTGTGGTAAAAAGCATCGAGTGAAACCACCAAAATGCTCGAAGCCATGCCTGTTACCCCCAGAATGTCACCATGAAAAACGCGAGAAACACAAGTGCCACTTTGGTGAATGTCCTCCTTGTCGCCAAATTTGCAATAAATCAAGATCAAACTGTTCTCATCTGTGCATAGCAAATTGTCACTCTTCtgttaacattaaaattgaagCACAAAAAGCTTCAATGCCTTGGGAGCAAACCCTGcctcaatttgaaaaaaaatgcctACCATGTCCTGACTGCAAAGAACCTGTTATGGTAACATGTCTAGGAGATCATGAGACGTCAGCTTGGCCTTGTTATATGGCTAAACCTTCCAATTGTGGAAGACCATGTGGAAGAATTTTAAGTTGTACTAATCATACATGCTCTTTATCATGTCATGTGGTAGAAGGCTCTAATGACAATGCTTTGgcAGGATATAATTGTGAGAAATGCGAAAGTCCTTGTTTGAAACCTCAACCAGAAGGATGTATTCATTCGTGTCCAAAACCTTGTCACCCAGGGTTATGTCCCCCTTGCAAACAAATGTTAAGGATAAAATGTCACTGTGTCTTAACTCAACCATATGTTTTATGCTCTGATTGGTTGATTATTGAAAAAAGAGAAGAATTACAAAGTTGTGGCAATCAATGTCCCAAAAATTATCCTTGTGGTCATCGTTGTAAAACCAACTGCCATTCGGGTGATTGTCCCGATCCCGAATCGTGCAagagaaaaatcaaaatcactTGTAAATGTAAAAGACTAAAGAAAGAGTTCCAGTGCGAAACAATTCGCAAAGGTTTGGCAATTCTAGAATGTGACGAAATCTGTAAACAAAAGCAGGAAGAAGAACGAAAGAAACGGGAAGCAGAGGAAGCTATCAAATTAAAACAGCAAGAACTGAAAGATCAGAAAGAACTCGAGGAGTATCAAAAGAAATATTCGGGAAAGAAGAAACCCAGGAAGAGGAACGTCAATGATGAAGTCGAGAATAAAAGTTTCTTTGTGAAATATTGGATTGTTATTTTATCAGTTTTCTTGTTTGTGACGTCTCTAGTGGTATATCAAGCAttgagttaa
- Protein Sequence
- MSNNRPKSNPWNKNNSTQKQKKTSVSSLGPNINSSGEVKFKEAQTKLQNAVKKHIKDYESSSEEEDIDSTNVIDEILKQYAKTGGTNDQLSRTQIFIEESFLSGATTCLICISRVKRDDQIWSCLNCHGGFHLNCIQRWSKDTVIQLKQRIEEQTISKEKKLHWCCPKCRYEYNPEQIPTKYVCFCGKAENPKYQPFLVPHSCGEICRKDLLPQCGHQCLLLCHPGPCPPCPVTVSVTCFCGSQLPVTKRCSFKGWSCGSRCGKELSCRRHTCSEPCHDGNCQPCSKKSIQKCMCGSSQKLRDCNSPIWQCDKVCGKSLDCGKHKCENVCHAGVCNSCLLAQPRTCPCGKTKYQLPCTEEVPTCPDTCGKLLECGIHSCNYRCHKDKCGLCLEIVTKACRCGQHIKEIQCCKQYLCDTKCKRLRDCNKHPCNRKCCDNNCPPCEKPCGQTLQCGNHKCQSVCHRGPCFPCQQTNTVSCRCGSTKITVPCGKKHRVKPPKCSKPCLLPPECHHEKREKHKCHFGECPPCRQICNKSRSNCSHLCIANCHSSVNIKIEAQKASMPWEQTLPQFEKKCLPCPDCKEPVMVTCLGDHETSAWPCYMAKPSNCGRPCGRILSCTNHTCSLSCHVVEGSNDNALAGYNCEKCESPCLKPQPEGCIHSCPKPCHPGLCPPCKQMLRIKCHCVLTQPYVLCSDWLIIEKREELQSCGNQCPKNYPCGHRCKTNCHSGDCPDPESCKRKIKITCKCKRLKKEFQCETIRKGLAILECDEICKQKQEEERKKREAEEAIKLKQQELKDQKELEEYQKKYSGKKKPRKRNVNDEVENKSFFVKYWIVILSVFLFVTSLVVYQALS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01307710;
- 90% Identity
- -
- 80% Identity
- -