Csor010958.1
Basic Information
- Insect
- Cosmopolites sordidus
- Gene Symbol
- tfip11_1
- Assembly
- GCA_031761425.1
- Location
- JARFXV010000266.1:378735-390932[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-94 1.7e-89 301.6 13.8 1 275 397 668 397 668 0.98 2 2 0.047 1.2e+03 0.3 0.3 241 272 679 710 670 713 0.79
Sequence Information
- Coding Sequence
- ATGGACGACGAAatggaaaaatttgaaattacgGACTATGATTTAGAAAATGAGTTTAATATTAATAGAAGTCGTAGAGGATTTTCGAAGCAACAACAAATATACGGTATATGGGCCGATGATAGTGAAGATGAAACAGATGATAAAAAACCTATTAGGGGggttaaaaaaccaaaaaactaTTCAGCACCCATTGGTTTTGTTGCTGGTGGTGTACAACAaactggtaaaaaaaataagaaagaagaGATGGAATCAGAAGATTCTGGTGATGAAAAACCAACAACATCTTTTAAAATCAGAGATAGTTCAGAATCAGAAGATGAAATTGCCCCTAGAATTGGATTAGGAAAGCAATATAAAAACCCTACACAATCTACAGTAACTGAAGTGACAGCTGATATAGCAGGATTTAGAACAGGAAATAAAGTAAACAGTACCTTAATTAACCAAGGAATGGGAAACTGGGAAAAACATACTAAAGGAATTGGAGCCAAGTTATTGTTACAGATGGGATACCAACCTGGAAAAGGTTTAGGTAAAGAATTACAAGGTATATCTGCACCAGTGGAGGCATACCTTCGAAAAGGAAGAGGAGCTATTGGAGCATATGGTCCTGAAAAGCCTGCGACCATTCCAAAGCTACaggAGAAAGAAAGCAGAATAAAACAAGAGGAGGAATCAGAATTGAAAGGACCAGCCAAGTGGAAAAGGAGCGATATTGCAGCGAAAAAGACGCGCTATTATTATAGAAGCGTTGATGATGTAATTGAGAAAGGTAAAAGACCAGGAGGTTATAGAAATTCAGGAATTTCAAGtgaGCTTACAAAAGTTAAAGTTATTGATATGACAGGACCACAACAGAGAGTCTTAAGTGGATATCATGCTCTTAGTGGTCTAAAAGCTCCACCTGGCGTTGAACACTTTGAAGATGTCGTTCATAAGAAATGCCAAAATTTTGCTCTGCCAGAAATTCAGCACAATTTGGATATATTAGTAGATATGTGTGAACAGgagATAATTCGAATTGACAGAACAAACAGACATAATGAAGATAAACTAACTTTGCTTAAACAAGAGGAAAGTACCATTAAAGATGAAATTTTGAAAGAAGATAATATAGTTGATAGTTTGAGAAATGTCttgaacattgtagataaactaatggATCCCTCACAAGATTATTCTTTGGGTCAGATAATGGATATATTCAAAGGATTGCTGaaaaaccATTATGAAGAATATTGCAGATATGAATTGTCTGAGTTAGCACCTGGATTAGTAGGACCATTGTTAACATCAGCCTTGGCCAACTGGAACCCATTGCAACAGCCCAAGCAGTGTATGGAATTTTACAGGGAATGGAAGGACATACTGGAGGAACCAAGACATCGTGGGACATTTGAAGGTAATAAAGTTGGGATACAGCCATACGATAGTCTCATATGGCATACTTGGGTGCCAGTTGTAAGAACTTGTGTTAGTTCATGGAATCCCAGAGATTGTGATCCTCTTATAAACCTAATTGAAGCTTGGAAATCTATTCTGCCAACATGGATTTTGAACAATATAATTGATCAGATGATTATGCCTCGAATATTGAAGGAAGTGAATAACTGGAATCCACTTACAGACACTCTTCCTATTCATTTATGGATACATCCTTGGATACCTTTATTAGATGAAAAacttcaagaaaaaatctacCCTGTTATCCAGGATAAACTGGGAGCAGCTTTAAGTGGATGGCATCCATCAGACAAATCGGTTAAGCTTATGTTACAACCTTGGCAAAGAGCATTGTCACAGGGTGCTTTCCTAGCATTTCTACTTAAGCATATTGTACCTAAACTACAACTGTGTATGCAAAATATGGTTATTAATCCTCACCAGCAGCTTCTAGATCCATGGTATTGGGTGATGGACTGGTCTGACATGATTTCTATACCTAATATGACTTTAATTCTGGATAAGTTTTTCTTCCCAAGATGGTTGCAAACATTGGCCATGTGGCTGAATCATAACCCAAATTATACTCAAGTAACAGAGTGGTATTCAGGCTGGAAAAGAATGGTCTCAGATGATCTACTTGCACAAACGACAATTAAAGAAAGTTTCCATAAAGCACTAGAAATGATGAGTAGAGCTGTGGGTATCATTCAACAACCAGGGGCACAGGAATCTATTTCATATTTGTCAAATAATGAAATGAATGTTCCATTGACAGCACCACCACCGCCGAAAATTGAGAGTTTAGCGGAAGCCGTCAAAGTAGCATCTAAAATTCCTCAAGGCTTCAAAGATTTGGTAACTAAACGGTGCGAAGAGAGAGGTATACTATTTGTTCCAATACCTAATAAATACCATGAGGCAAAGCAAGTCTATAGAATAGGAGTGAATGGGGTTCAGTGTTATATCGATAGAAACGTTATATTCTACACTAACAATAATTCAACGTGGATACCTACATCGTTAAACAGGCTATTGGATATGTCTTCATGA
- Protein Sequence
- MDDEMEKFEITDYDLENEFNINRSRRGFSKQQQIYGIWADDSEDETDDKKPIRGVKKPKNYSAPIGFVAGGVQQTGKKNKKEEMESEDSGDEKPTTSFKIRDSSESEDEIAPRIGLGKQYKNPTQSTVTEVTADIAGFRTGNKVNSTLINQGMGNWEKHTKGIGAKLLLQMGYQPGKGLGKELQGISAPVEAYLRKGRGAIGAYGPEKPATIPKLQEKESRIKQEEESELKGPAKWKRSDIAAKKTRYYYRSVDDVIEKGKRPGGYRNSGISSELTKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHFEDVVHKKCQNFALPEIQHNLDILVDMCEQEIIRIDRTNRHNEDKLTLLKQEESTIKDEILKEDNIVDSLRNVLNIVDKLMDPSQDYSLGQIMDIFKGLLKNHYEEYCRYELSELAPGLVGPLLTSALANWNPLQQPKQCMEFYREWKDILEEPRHRGTFEGNKVGIQPYDSLIWHTWVPVVRTCVSSWNPRDCDPLINLIEAWKSILPTWILNNIIDQMIMPRILKEVNNWNPLTDTLPIHLWIHPWIPLLDEKLQEKIYPVIQDKLGAALSGWHPSDKSVKLMLQPWQRALSQGAFLAFLLKHIVPKLQLCMQNMVINPHQQLLDPWYWVMDWSDMISIPNMTLILDKFFFPRWLQTLAMWLNHNPNYTQVTEWYSGWKRMVSDDLLAQTTIKESFHKALEMMSRAVGIIQQPGAQESISYLSNNEMNVPLTAPPPPKIESLAEAVKVASKIPQGFKDLVTKRCEERGILFVPIPNKYHEAKQVYRIGVNGVQCYIDRNVIFYTNNNSTWIPTSLNRLLDMSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00847663;
- 90% Identity
- -
- 80% Identity
- -