Csor031098.1
Basic Information
- Insect
- Cosmopolites sordidus
- Gene Symbol
- Rel_1
- Assembly
- GCA_031761425.1
- Location
- JARFXV010000990.1:57575-69154[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1e-38 1.3e-34 121.1 0.2 1 168 60 250 60 251 0.91 2 3 0.31 4e+03 -0.9 0.9 85 132 346 393 279 397 0.71 3 3 0.011 1.5e+02 3.8 0.6 79 151 540 608 507 618 0.56
Sequence Information
- Coding Sequence
- ATGACTACTTATCCAACACCGCCTTCCAGTATTGGAGATTCGCCCCAACctatttattttgtatcttcACCAGGTTCAAATAGTTTTTCTTCACCACCTCATATCCAAGCTCAACTAATGCCTAGCGACACTGACATGGTTGATTTGGCCGGCTTAAATCTGGACAAACATCCTAAATTAAAATTCATCGAACAGCCAATAAATAAATTCAGGTTTCGTTACAAATCAGAAATGGCTGGCACACACGGAAGTCTTTGTGGTATGAATTCTGATAAGTCCAGGAAACAGACTTATCCGGCTGTTGAATTGTTGAATTGTAATGAAAAAGCTGTCATAAGATGCTCTATATATCAATACAACGTCAAGGAAGATTATAAGCCACATCCGCATCGATTGATTATGAAGCGAGGCAGGGAAGAATTTGATGATCCTCACGACATCACTGTTGGACCAGAAGAGGGATTCGTAGCCACGTTTCACAGTATGGGCATAATACACACTGCAAGGAAAAATATCGTCGGAGAACTAATCAGAAAGAAATCGCAACTTCAAAAAGAACAAATTGCCAGGATGGATATGCGGAGTCGCTCCCTAAACACCGGTGAAATCATGGATATTAAAAGATTGGCTGAGGATGAAAGCAAATCTATTAATTTGAATATTGTATGTCTGAGATTTGACGCGTTTATCGTCAAAGATGACATTCTGAGGCGGATATGTGACCCGATATTCAGTCATGGAATCAATAACCTGAAAAGTAGAGGTCCAAGAGCCAACGAAATTAAGCAACTAACTAAACGTTATGAAGAAAGCAAAGCTTTAGTGAAAGCtttagaaaaaaagaaaggCTCAAAATCCAAAATCACACCCCAAACATCAACTAAAGGTACACAAACAACAAATGTGTACAAATCAATCGATATCGGAACGCAGACAAAAGCGTTTAGCACCAAAAAATCAACAATACAAACTCAAACAGATGTTATCCCAACATCAGTATCAGTAGTGGAAACACAAACTATAGTGTTAGAAACTGCAAACGCAGAAATCCAAACGGATTTCACGAATGAAGACCCACAGTGCATCTCAAACACAGAGGGCCACCATCAAGTCACCTCTCGATTATCTAGACgtaggaagaagaaaaagaccACTTTCGAGGCCAGTCAGTCCCCGGAAGAAGCGTCGAATCCTCCTCCATCGACGTCAATCACCAGCCATGAAAAATCCACCGACGAACTAAAACAAATCAAGAAGTCTGAAGCACCGTCAGTGCCAATAAGACGTAAACCCAATCCAATAGTCTTAAGAGACAAATCGAAGTTTCAAAGCGCAATAAAAGCCTTGAAAACAGCCAAAATAGCCGTTGGGCCGGCTAAAACGAGACCGGACGGAGTCCTCCTGACTCCATGTACGGAATCTGACAGAAAAGCCATAATAGAACTTTTcgacaaaaacaaatttccaTATTATCTACCAACATCAAGTAGAAATCTACGCATCGTCATCAAAGGCGTGTTAGAAACCATACCAACAACGGATGTCGAAACCGAGCTACAACAGCTAGGTTTCCATCCAATCTCCACCATTAGATGGAAAAATAAGAACAAGAATCCCATTGCGATCGTACAAGTCACAGTACCTCGCAATGAAACAACCATCCTAAATATTAAACAGTTCCACTCTCAGCCCGTAAGAGTggaaaagcaaagaaaaaagaagCGTAATCCCACTACTAAGATGCAAACAACGTCGCATCACCAGCAAGAAGAAAAGAAACCAAACCTGAACGCAGTTTTCCGAGCCTGGCTAGGAGAACAGCGAAGCTCCTCATTAGAGAATAACCCAATCCAACTGCGAGAAGAAGCTTCGGCTGAACTTGCAGAATATTTCAAGATAGCGATGTATCAGGCTCTTATGAACCTAGATTTACCGCTTTCCAACCAATTTCAACACAATAATTCCGATCAAGCCATCGAAGAAGACGCGTAG
- Protein Sequence
- MTTYPTPPSSIGDSPQPIYFVSSPGSNSFSSPPHIQAQLMPSDTDMVDLAGLNLDKHPKLKFIEQPINKFRFRYKSEMAGTHGSLCGMNSDKSRKQTYPAVELLNCNEKAVIRCSIYQYNVKEDYKPHPHRLIMKRGREEFDDPHDITVGPEEGFVATFHSMGIIHTARKNIVGELIRKKSQLQKEQIARMDMRSRSLNTGEIMDIKRLAEDESKSINLNIVCLRFDAFIVKDDILRRICDPIFSHGINNLKSRGPRANEIKQLTKRYEESKALVKALEKKKGSKSKITPQTSTKGTQTTNVYKSIDIGTQTKAFSTKKSTIQTQTDVIPTSVSVVETQTIVLETANAEIQTDFTNEDPQCISNTEGHHQVTSRLSRRRKKKKTTFEASQSPEEASNPPPSTSITSHEKSTDELKQIKKSEAPSVPIRRKPNPIVLRDKSKFQSAIKALKTAKIAVGPAKTRPDGVLLTPCTESDRKAIIELFDKNKFPYYLPTSSRNLRIVIKGVLETIPTTDVETELQQLGFHPISTIRWKNKNKNPIAIVQVTVPRNETTILNIKQFHSQPVRVEKQRKKKRNPTTKMQTTSHHQQEEKKPNLNAVFRAWLGEQRSSSLENNPIQLREEASAELAEYFKIAMYQALMNLDLPLSNQFQHNNSDQAIEEDA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -