Basic Information

Insect: Cosmia trapezina
Gene Symbol: Kr
Assembly: GCA_905163495.1
Location: LR991046.1:3172388-3226645[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 5.2e-05 0.0071 18.2 4.8 1 23 279 301 279 301 0.98

2 8 0.089 12 8.1 1.6 1 23 308 330 308 330 0.97

3 8 1.4e-06 0.00019 23.2 0.4 2 23 373 394 373 394 0.98

4 8 3.2e-06 0.00044 22.0 3.7 1 23 400 422 400 422 0.99

5 8 0.00038 0.051 15.5 1.8 1 22 428 449 428 453 0.93

6 8 0.00019 0.025 16.5 0.1 1 23 490 513 490 513 0.94

7 8 3.8e-06 0.00051 21.8 1.0 1 23 522 544 522 544 0.98

8 8 3e-05 0.004 19.0 0.4 1 23 550 573 550 573 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	5.2e-05	0.0071	18.2	4.8	1	23	279	301	279	301	0.98
2	8	0.089	12	8.1	1.6	1	23	308	330	308	330	0.97
3	8	1.4e-06	0.00019	23.2	0.4	2	23	373	394	373	394	0.98
4	8	3.2e-06	0.00044	22.0	3.7	1	23	400	422	400	422	0.99
5	8	0.00038	0.051	15.5	1.8	1	22	428	449	428	453	0.93
6	8	0.00019	0.025	16.5	0.1	1	23	490	513	490	513	0.94
7	8	3.8e-06	0.00051	21.8	1.0	1	23	522	544	522	544	0.98
8	8	3e-05	0.004	19.0	0.4	1	23	550	573	550	573	0.96

Sequence Information

Coding Sequence: ATGGAAGCGATGAGTTTAGACAATGAGGCAGATATTAAATTTGATTTTGAATCGGCGAAAGCTATTTGTAGGTGTTGTTTGATGACGGAGAGACGAATGCTTAACGCTGTTATGTTCGAAGCGTTTTTCAAAGATCTTGCCGGAATTAGCGTGACAGAATCCGATGGTCTACCGCAGTGGTTGTGTTACGAATGCGCTATACTCCTACAGAAGTCGGTCAGGTTCAAACATAAAGTGTTGCGAGCTCACACCATGCTGTACGAGTATCTTACACGCTGTGCTCCCttCCCGATTGAGGCTCAAGATGAAGAGTTGTCCAAGTATGCCAGTCCTCATCTGAGTACCACGAGTGTGCTGACCATTGATATCGTGGGCAAAGGCAAGGCCGGGTACCAGCAGGTTCTAGAGcATGAAAAGCAAGTACAATCTTCAGGATTAGATGACATTGATATTCAAATGATTAGTAAGATAGAAGAAGATATTGTGAAGGAAGAGAACGGCTTCTCAGACTATGAAGATAATATTACTTTAGAAGAATTTAGATCTGTGGCAACGAAGATGACAGAAGATGACATAGCATCTTTGTTACAAGAGACTGGTTCAGTGCCAGTGGAGATTAAGGAAGAACCGCTCATGAAGACGAGGAAGACTAAAGAAGTTAAagttaaaaagaagaaaaaagaaatTGAAACAACTCCTGAAGCAGGGATAACTAGATCTTCAATTAGAAAACCTATAGAATTGGATCCTACTAAGATCAGAATAGTCACTTTGAACCCTGAGGAACAAATTAAGCAGAGAGAGgaagaAAGTAAGGCAGGATTGAAGTTCCCGTTCAAATGTAATTTGTGCCATAAAGGATTTAATTTTGAgtctaaattacaaaatcataTGAGTAAACACAGCCCGTCTCGAGGTCCATACGAGTGCAAGCTATGCCGCATGCACCTGCCGACGTCCTATAGCTTTAACGTGCACTCCTTGATACACAACCGACGGTACGAGTGCGTCGCGTGCGGCCGGCGCATGATCGACCGAGCCTCCATTATAGACCACTACAGTAACAACAAAACTCACAGAGGTCACATGAGAAACCACCACGGTGGCGACCGGCCGAAGTGTGACCAGTGCGGAAAGACCTTTATTAATAAGGACTCCTTAGCGGAACATCAGCAAATACATCAGGGTATCAAGAACTACGAGTGTCCAATATGCAACAAGCGCTTTAGAACCAGGACCCAGATCAAACACCATCAGCTCACACACACGGACGTCAAGGACTACTACTGTGTCGAATGCGATGTGAGATTTAAATCAGCGCACAGTCTTAGGCAACACCTGCAGAAGAGCCTAAAACATCGAGATAAGCagagtttaaaATTCTCGTGCCCCCGCTGCCCTGCGCGCTTCCTGTGCGCGCGCTCGCTGTCGTCGCACACGAGCGTGCAGCACGACGGCGTGCGTGCGTACGTGTGCCCCGAGTGCGGCGCCGCGCTGGCGTCACGCTCGTCGCTCAGCAAGCACCAGCACGCGGTGCACCGCGGTTTGAGGCCTCCGCCGCGACACGTGTGCGACACTTGCGGGAAGGCCTTCCGGGGTAAGAGTGTGTTGACAAACCACGTGCGCACGCACACGGGGGAGAAGCCGTTTGAGTGCGGTGAGTGCGGGCGCCGGTTCACGCAGAGGACGGCCATGAGGACGCACGTCAAGCTTGTGCATCTGAAGCTGAGGAAGACTGCTAAGGTGAAGCCCGAAGTTCCCTTAGAGGTGCAGTCTCCCAAGCTAGATGTGTTCAAACCTGAGCCGCTACTGGAGCCATGGAGACAGCCGTGCGATGTCTACTTCCATGTCACAGCAGGCCCCTGA
Protein Sequence: MEAMSLDNEADIKFDFESAKAICRCCLMTERRMLNAVMFEAFFKDLAGISVTESDGLPQWLCYECAILLQKSVRFKHKVLRAHTMLYEYLTRCAPFPIEAQDEELSKYASPHLSTTSVLTIDIVGKGKAGYQQVLEHEKQVQSSGLDDIDIQMISKIEEDIVKEENGFSDYEDNITLEEFRSVATKMTEDDIASLLQETGSVPVEIKEEPLMKTRKTKEVKVKKKKKEIETTPEAGITRSSIRKPIELDPTKIRIVTLNPEEQIKQREEESKAGLKFPFKCNLCHKGFNFESKLQNHMSKHSPSRGPYECKLCRMHLPTSYSFNVHSLIHNRRYECVACGRRMIDRASIIDHYSNNKTHRGHMRNHHGGDRPKCDQCGKTFINKDSLAEHQQIHQGIKNYECPICNKRFRTRTQIKHHQLTHTDVKDYYCVECDVRFKSAHSLRQHLQKSLKHRDKQSLKFSCPRCPARFLCARSLSSHTSVQHDGVRAYVCPECGAALASRSSLSKHQHAVHRGLRPPPRHVCDTCGKAFRGKSVLTNHVRTHTGEKPFECGECGRRFTQRTAMRTHVKLVHLKLRKTAKVKPEVPLEVQSPKLDVFKPEPLLEPWRQPCDVYFHVTAGP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01533326;
90% Identity: -
80% Identity: -