Ctra014296.1
Basic Information
- Insect
- Cosmia trapezina
- Gene Symbol
- rela
- Assembly
- GCA_905163495.1
- Location
- LR991026.1:28600218-28604863[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.3e-32 7.7e-28 99.1 0.7 1 120 46 180 46 184 0.79
Sequence Information
- Coding Sequence
- ATGGAAGAAatcgATCATATTATACGCAACGCGCTGGACCAAATAATCGGCAATAGTACTGAGACCGCAGGCTCTTCCCGGTCCTCCCCGCCACCGGTCCAACCTCCGGAAATCGTTCAGCAACCAGAGCCTACTGTGAAGATTGTTGAACAACCTAGGCCATTCAGAAGATTTCGCTACGACTGTGAGATAAAATCAGCTGGAGCTATCCAAGGAGTGCGAAGTACGAAGGATAAAAAGTCGTTCCCTACGATCAAGATAGAGAACTACGAAGGACCAGCTGAGATTACCGTGTCATTGGTCTGCAAAGATAAGCCCTATAGGGTGCACCCCAGTGGCATAGTGGACAGCAAGAAGTCATTAAAAGAAGGCTTTACTTACATACACGAGAAACGAGTGCAAGTCACAAGCAACCACTGCGTAATTCCATTCAACCACCTCGGCATTCGACTTGTGCAAAGCAATTCCAATTGTAAGAGAGAAGAGAGAAACCTGATAGAAGAAGCGCTGCAGCTCAGGGAGAGCCAGAACGTTGATCCGTTTGGTCGTGAGTGA
- Protein Sequence
- MEEIDHIIRNALDQIIGNSTETAGSSRSSPPPVQPPEIVQQPEPTVKIVEQPRPFRRFRYDCEIKSAGAIQGVRSTKDKKSFPTIKIENYEGPAEITVSLVCKDKPYRVHPSGIVDSKKSLKEGFTYIHEKRVQVTSNHCVIPFNHLGIRLVQSNSNCKREERNLIEEALQLRESQNVDPFGRE*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -