Cpyr013599.1
Basic Information
- Insect
- Cosmia pyralina
- Gene Symbol
- pol
- Assembly
- GCA_946251865.1
- Location
- CAMIUE010000453.1:848888-878985[+]
Transcription Factor Domain
- TF Family
- zf-LITAF-like
- Domain
- zf-LITAF-like domain
- PFAM
- PF10601
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family display a conserved zinc ribbon structure [3] with the motif C-XX-C- separated from the more C-terminal HX-C(P)X-C-X4-G-R motif by a variable region of usually 25-30 (hydrophobic) residues. Although it belongs to one of the zinc finger's fold groups (zinc ribbon), this particular domain was first identified in LPS-induced tumour necrosis alpha factor (LITAF) which is produced in mammalian cells after being challenged with lipopolysaccharide (LPS)[2]. The hydrophobic region probably inserts into the membrane rather than traversing it. Such an insertion brings together the N- and C-terminal C-XX-C motifs to form a compact Zn2+-binding structure [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.8 8.4e+03 -1.6 0.7 8 55 288 294 280 307 0.54 2 3 0.47 1.4e+03 0.9 0.1 53 68 1175 1190 1166 1192 0.77 3 3 2.6e-19 7.9e-16 59.3 9.4 3 69 1589 1653 1587 1654 0.91
Sequence Information
- Coding Sequence
- ATGCCAACGACACCAACGACGATggtaacaagaaataagaaaTCCAAGAAGCAGGGAGAAGATAATGAAGATGAAACAGAAAAGGAAAATGAAACAGAAGAGGAGATGTTCACGTCCATCACCATGGACCAGGGTCAGTTTGCAACTCTGATGCAATCACTGCAGCAGAGTCAGGCAGAGATATTCGCGAGGCTCATCCAAGATGTTAGGACTTCGACACCGGCGCCTACTGAAGTGTCCATGTCAGCGCCCGCCGCGAACTTCTCAAAGTGCACAACTCGATTTAACGGATCGTCCGCTGATGTCGACGGGTTtatcgacgcaataacagtgtaCAAGAACTGCCTTCAGATATCAGATGATAACGCTGTCAAAGGACTCTCCATGTTGCTAGTAGACTCGGCAGCATTATGGTGGCAGGGTATAAAAACCAGCACCACGTCATGGCCGGATGCTatgcaaaaactaaaaagtgcatTCGGAGAGCATCGCCCGCCATTTCGtatatatttggaattgttttcATTGCGACAAGGTACGGAcaaaactgatttatttattgcgaaGACGAGAGCGCTTTTATCGAGATTGCCACAAGAAGATCTACGTGAAAAAGTTCAACTGGATATGGTATACGGGCTTCTCGATCGTAGAATAAAAAAGCGGCTCGATCGTAACTCCATAACATCGTTCGACCAGTTACTGCACCGTGCCAGAGCGATCGAAGAATCGTTAGAAGACAGCGCATGCGACAAGACACCGGCACTGACGCCATCGAGCGCCAGTCACCAAGCGGCCGTCGCCGGCGCCCCTTCAACTTCGGCACCAAGTGATAAAAACACTCGCAGCAAAAGACTGTCGTGCAGTTACTGCAAGAAATGGGGACATGAAAAATCGCAgtgtaaaaagttaataaacaatgataaaagtgATAACGTAAAAAGTGATAACGGGAAAAGTGATGATagcgtaaacaaaaataaagctatTCAATGTTATGGGTGCGGTGCCCCTAACGTTATAAAATCGAAGTGTGAAAAGTGCAAATCTAGTTCTCAAAACGCATTCTATTCGGTTACGACAACTAGTGATAgcgtaaattcaaaagtgcgcgGTTCCCGTAATCATAGCGTTATCGTGCGCGATGAATGCGCGTCGGGCGAGCCGACAGCCGCAAGCGTCCCGCCACCCGCGCCGGCCCCGCAGAGTACGTGCGGCCGCGCCAAGGTCGCGAGCGGCAGCGCTGCCCGTTGCCTAGCGACCGTCCGTGAGCGTAACGATATCGTTCCTCGCGGTCGGAAGTCGCCGGGCCCGCCTCGCATCGTTCCTGCCAGTACCACAGGTATTTTGGGGGAAAATGGGACAGCGTTACTGGACACTGGTGCTAGGGGCTGTATTGCCGGTCACACACTTTTTCGCGTGTTAAAGGAAAAAGGCCATCCTTTGCAACAGTGCACTAGAAACATCCGCCTGGCGGATGGTTGCACGCGCCTGATGGAGGTGCTTGTTGCAGAGGTACAGgtgaaactttttcataaaattgtgcccaccgagtttataattttccccgaagcgaaagataatgaaacacttttaggtattgattttattaacagTGCCGGTCTCGTTATCAATTTTAAGCAGTGCCTTTGGCATTTTTCGGATAGTAGTgatcaaaagtataaattgaTTTTGGAAACTTTTTCACCTCGTCAAAATTCGTACGCCGCGATGAATGTTTTACGCGATGACGAGGGTGCAGGTTTAGAGGATCAGGAGCGTGAGGAGCTTGCCCAATTGCTCACGAATTTTCAGGATATGTTTAATTCGATTGGGGAGCCGACTCCATATGGAGAGCATCATATAGATACGGGAAATAATTTGCCGATAGCGACGCCTCCATATCGCCTGACACCTGCAAAGAAGGAGATCATGCAGCAAGAGCTTACCAAAATGTTAGCTGAAGATATTATTGAAGATTGTGAATCTGCATGGGCTGCGCCAGCCCTGCTAGTACCTAAACGTGACGGCAGTTTCCGGTTTTGCGTCGACTATCGAAAGTTAAATTCGATTACGAAGAGTGACGCCTATCCAATGCCTCGTATTGATGAACTGTTGCAATCTACTAAACGTGGACGTTGTCACATGAGTACAATAGATTTGCGATCTGGCTACTGGCAAGTGTCAGTTAAAGAAGAGGATAGGGATAAGACGGCTTTCGTGACCCCTTTCGGAACTTTTCGTTTTAAAAGGATGCCGTTCGGTCTGAAGAACGCGCCGGCTACTTTTCAGCGTCTGATAGACAGAATGCGATCTGGTTCAGCACTAAAGGACGTCACAATACTAGGATATTTagacgatttattaattataacgcaGGGGGATTTTTCGAGGCACCTGGAAGACCTGCGAATCGTTTTTGAACAGCTGATGAAGTTCAAATTGCGTGCTAACCGAGAAAAGTGTGTGTTTGCACGAGAGTCGGTTAAATATTTAGGTCATGTGATCTCGCAGGACGGAGTCTCAGCTGATGAAAGGAAAATTCAAGCCATATTAGACATGAAAGAGCCGTCTGCACTGGGACACCTCagaacatttatacaaacatgtTCCTGGTTCAGGAAATTTATTCCCAAGTTTTCGGAGGTAGCAGAGCCACTGACAAGATTGACAAGGAAAAATCAACCTTGGATATGGGGACCACAACAGGCTGAAGCGTTCAGTAACTTGAAAAGGCTTTTGACGTCAGCGCCGATCCTCATACAGGCAGACTACTCCAAGCCATTCATCCTGCGCACAGATGCGAGCAACTATGCGATAGGCGCAGTGTTGCTTCAAGGTGAAAAGAATGAAGAACGACCCATTGAATTTGCCAGCCGTTTGTTATCAGCGGCTGAACGGAATTATTCGACCACGGAGCGGGAGGCTCTGGCGGTCGTCTGGGCAGTCGACCGTATGCGGGGTTACATTGATGGTCATCCAGTCGTTATAGCCAGTGATCACCAGCCCTTGAAATGGCTGCTGTCCTTGAAGTCACCTTCTGGTCGTTTAGTGCGTTGGGCACTAAAGCTGCAGGCCTATGACATCCGGTTTGAGTACACTCCCGGAAAGGTAAATGTAGTGGCCGACGCACTCAGCCGCCCTGTCTGTACAGATGAGTCTCGTGAATCCTGTGGAATATGCACTGTCATTATTGATTTACCTACGCGAGATCTCACGGAGCTACGTGCAGCACAAAAATCTGAcccagatttaattaaaattgtgaagGAATTAGAGGATATAGAAGAAGTTGCGTCTCGCCGTTGGACAGAACGTGGTTATCTCATGGAACGCGGTATCCTTTATCGCTATAACCCAGATACAGACAACGAGTCGCCGCAATTAGTAATACCTGTAAGCATACGTGAAGGGATTCTAAGAGAATGTCATGATGCTCCAATTGCAGGTCATCCTGGTATAGAGAGAACATACCAGAAAATAGCTCAAAACTATTACTTCCCTGGCATGAGAAGAATTGTAACCGATTATGTAAAATCATGTTCCTCTTGTCAACGCTATAAAGCGACAAATGAAAAGCCACCTGGTCTGATTCAAACACCGATTTTAAACCAGCGCAATGAAGTCTTGGCTATCGACCTATTTGGACCACTGCCAGAGGGCGAAAACGGGGAAAAATGGATCCTGTTAGTGGAAGATACCGCGACAAGATGGGTAGAATTGTATGCTCTCAAAGAAGCAACCTCTGTCGCCTGCGCGAAAGTACTCATAGAAGAGTATTTCCTTCGGTTCGGCTTACCACGTCGCATTATTTCGGACAATGGTGTCCAATTTGTTTCAGCGGTCATGCAGAAATGCATGTTCATTCTCGGCATTACACAAGACTTGATACCCTATTACCACCCAGAAGCCAATCCAGCTGAAAGGAAAAACCGGGATATGAAGACCCAATTGGCCCTGTTGGTTGGTACGGATCACCCTTCATGGCCTAAGCAGCTACCGATAGTACGGTTCAGTATGAACAGCGCGGTCTGTGAAACAACAGGGGTTACTCCTGCATATTTGACGTTTGCACGTGAGCTGAGGTCACCGTTAGAGGTGTACAATGATCCAAGGGCAGTCTTAGAGAAGGATAATTTTGTACCACAGATCACTCCttacctgtcaaaatttttaaactccTTAAGTGAAGTCCGTGATAGAGTAGAAAAACTGCAGGACAGAAGGAAGACTTACGCTGATCGTTCGAGAAGAGTAGGAGAGGATTTTAAAGTAGATGACAAGGTTCTATTGACTACCCATCAGCTGAGCGACGCCAGCAAGTCAAAGACTGCTAAGTTTTTCCCTAAAAGGGATGGGCCATATGTTGTGAAGAAGAAAGTAAGTCCAACAACATACCTAATCGCGTCTGATGATAATCCTGGTGAGATATTGGGCAAATTCCACGCTAATCAGCTCACCCCTTTTCGAGGACGAGTAGATGAACGCGCTCAGCCAATGGAGCCAAAGAAAAAGCGAGGCCGACCTCGTTTACAACCTATTcgtaatgattttaatgtagggCTAGACCACGATCGAGGGCGTAATCGTGATCTAGAGGGGGAACCAGCCATGGAAAACGACGGACTTCCTCTGTATCCTTCGGAGTTCGAGAACCAAGTTCAGATAAAGAAGTTTAACCCAAGAGTCCAGGCACCAGCGGCGGTGCAACAAATGCCGGAGCCAATGCCAGCAGCACCAGCGATGCAGCTGCTCGGTCCCGAGAACACGGTGACGACTTGTCAGTTTTGCCGCGCGTCAGTCAAGACTGCTGTCAAGTACACAACCACATCGCGCACACATATGGCCGCCGCACTTTGGGGCCTGCTGTGTTGTTTGTGCTGTGTCCCGTATGGCGCTGAATCAGCTAAAAACTCCGATCACTACTGCCCCAACTGCCAGAGATACCTGGGCACTTATGTGAAGTAA
- Protein Sequence
- MPTTPTTMVTRNKKSKKQGEDNEDETEKENETEEEMFTSITMDQGQFATLMQSLQQSQAEIFARLIQDVRTSTPAPTEVSMSAPAANFSKCTTRFNGSSADVDGFIDAITVYKNCLQISDDNAVKGLSMLLVDSAALWWQGIKTSTTSWPDAMQKLKSAFGEHRPPFRIYLELFSLRQGTDKTDLFIAKTRALLSRLPQEDLREKVQLDMVYGLLDRRIKKRLDRNSITSFDQLLHRARAIEESLEDSACDKTPALTPSSASHQAAVAGAPSTSAPSDKNTRSKRLSCSYCKKWGHEKSQCKKLINNDKSDNVKSDNGKSDDSVNKNKAIQCYGCGAPNVIKSKCEKCKSSSQNAFYSVTTTSDSVNSKVRGSRNHSVIVRDECASGEPTAASVPPPAPAPQSTCGRAKVASGSAARCLATVRERNDIVPRGRKSPGPPRIVPASTTGILGENGTALLDTGARGCIAGHTLFRVLKEKGHPLQQCTRNIRLADGCTRLMEVLVAEVQVKLFHKIVPTEFIIFPEAKDNETLLGIDFINSAGLVINFKQCLWHFSDSSDQKYKLILETFSPRQNSYAAMNVLRDDEGAGLEDQEREELAQLLTNFQDMFNSIGEPTPYGEHHIDTGNNLPIATPPYRLTPAKKEIMQQELTKMLAEDIIEDCESAWAAPALLVPKRDGSFRFCVDYRKLNSITKSDAYPMPRIDELLQSTKRGRCHMSTIDLRSGYWQVSVKEEDRDKTAFVTPFGTFRFKRMPFGLKNAPATFQRLIDRMRSGSALKDVTILGYLDDLLIITQGDFSRHLEDLRIVFEQLMKFKLRANREKCVFARESVKYLGHVISQDGVSADERKIQAILDMKEPSALGHLRTFIQTCSWFRKFIPKFSEVAEPLTRLTRKNQPWIWGPQQAEAFSNLKRLLTSAPILIQADYSKPFILRTDASNYAIGAVLLQGEKNEERPIEFASRLLSAAERNYSTTEREALAVVWAVDRMRGYIDGHPVVIASDHQPLKWLLSLKSPSGRLVRWALKLQAYDIRFEYTPGKVNVVADALSRPVCTDESRESCGICTVIIDLPTRDLTELRAAQKSDPDLIKIVKELEDIEEVASRRWTERGYLMERGILYRYNPDTDNESPQLVIPVSIREGILRECHDAPIAGHPGIERTYQKIAQNYYFPGMRRIVTDYVKSCSSCQRYKATNEKPPGLIQTPILNQRNEVLAIDLFGPLPEGENGEKWILLVEDTATRWVELYALKEATSVACAKVLIEEYFLRFGLPRRIISDNGVQFVSAVMQKCMFILGITQDLIPYYHPEANPAERKNRDMKTQLALLVGTDHPSWPKQLPIVRFSMNSAVCETTGVTPAYLTFARELRSPLEVYNDPRAVLEKDNFVPQITPYLSKFLNSLSEVRDRVEKLQDRRKTYADRSRRVGEDFKVDDKVLLTTHQLSDASKSKTAKFFPKRDGPYVVKKKVSPTTYLIASDDNPGEILGKFHANQLTPFRGRVDERAQPMEPKKKRGRPRLQPIRNDFNVGLDHDRGRNRDLEGEPAMENDGLPLYPSEFENQVQIKKFNPRVQAPAAVQQMPEPMPAAPAMQLLGPENTVTTCQFCRASVKTAVKYTTTSRTHMAAALWGLLCCLCCVPYGAESAKNSDHYCPNCQRYLGTYVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -