Cpyr023940.1
Basic Information
- Insect
- Cosmia pyralina
- Gene Symbol
- Kr
- Assembly
- GCA_946251865.1
- Location
- CAMIUE010000872.1:86960-124768[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 5.7e-05 0.0067 18.2 4.8 1 23 280 302 280 302 0.98 2 11 0.096 11 8.0 1.6 1 23 309 331 309 331 0.97 3 11 3 3.6e+02 3.3 0.1 1 23 335 358 335 358 0.93 4 11 0.15 17 7.4 7.3 1 23 365 387 365 388 0.96 5 11 1.9e-06 0.00023 22.8 0.5 2 23 394 415 394 415 0.98 6 11 3.5e-06 0.00041 22.0 3.7 1 23 421 443 421 443 0.99 7 11 0.00041 0.048 15.5 1.8 1 22 449 470 449 474 0.93 8 11 0.4 47 6.1 0.3 1 23 482 505 482 505 0.92 9 11 0.00049 0.058 15.2 0.3 1 23 511 534 511 534 0.93 10 11 4.1e-06 0.00048 21.8 1.0 1 23 543 565 543 565 0.98 11 11 3.2e-05 0.0038 19.0 0.4 1 23 571 594 571 594 0.96
Sequence Information
- Coding Sequence
- atgGAAACTATGAGTTTAGGCAATGAGGCAGATATTAAACTTGATTTTGAATCGGCGAAAGCTATTTGTAGGTGTTGTTTGATGACGGAGAGACGAATGCATAACGCTGTTATGTTCGAAGCGTTTTTCAAAGATCTTGCCGGAATCAACGTAACAGAATCCGATGGTCTACCGCAGTGGCTGTGTTACGAATGCGCTATACTCCTACAGAAGTCGGTCAGGTTCAAACATAAGGTGTTGCGAGCTCACACGATGCTGTATGAGTATCTTACACGATGTGCTCCCTTCCCGATTGAGGCTCAGGATGAAGAGTTGTCCAAGTATGCCAGTCCTCATTTGAGTACCACGAGCGTGCTGACCATTGATACAGTGGGCAAAGGCAAGGCTGGATACCAGGAGGTTCTAGAGcaTGAAAAGCAAGTACAATCTTCAGGATTAGATGACATTGATATTCAAATGATTAgtaaaatagaagaagataTTGTGAAGGAAGAGAATGGCTTCTCAGACTATGATGATAATATTACTTTAGAAGAATTTAGATCTGTGGCAACGAAGATGACAGAGGATGACATAGCATCGTTGTTACAAGATACTGGTCACGTGGGCATTAAAGAAGAACCGCCCATCAAGacgaggaagaccaaagaagttaaagttaaaaagaagaaaaaagaaacTGAAACAGCTCCTGAAGCAGGGATAACAGTTGAAACTAAATCTTCAATTAGAAAACCTATAGAATTGGATCCTACTAAGATTAGAATAGTCACTTTGAACCCTGAGGAGCAAATTAAGCAGAGAGAGgaagaAAGTAAGGCCGGCTTGAAGTTCCCGTTCAAATGTAATTTGTGCCATAAAGGATTTAATTTTGAGTCTAAATTACAAAATCATATGAGCAAACACAGCCCGTCTCGAGGGCCGTACGAGTGCAAGTTATGTCGCATGCACCTGCCGACGTCCTATAGCTTTAACGTGCACTCCTTGATACACAACCGACGGTACGAGTGCGTCGCGTGCGGCCGGCGCATGATCGACCGAGCTTCAATTATAGATCATTACAGaTTTCAACACGAAGGATTCCTGACGTTATTCACCTGCCATCTGTGTGGGAAAGTTTCAAATAATAACAAAACTCACAGAGGTCACATGAGGAACCACCACAGCGGAGACAGGCCCAAGTGTGACCAGTGCGGGAAAACTTTCATTAATAAAGACTCCTTAGTGGAACATCAGCAGATACATCAGGGTATCAAGAACTACGAGTGTCCAATATGCAACAAGCGCTTTAGGACCAGAACACAAATTAAACATCACCAGCTGACACACACGGACGTCAAGGACTACTACTGTGTCGAGTGCGATGTGAGATTTAAATCAGCGCATAGTCTCAGGCAGCATCTGCAGAAGAGCTTAAAACATCGAGATAAGCAGAGTTTAAAGTTCTCGTGCCCGCGCTGCCCCGCGCGCTTCCCGTGCGCGCGCTCGCTGTCGGCGCACGCGAGCGTGCAGCACGACGGCGTGCGCGCGCACGTGTGCCCCGAGTGCGGCGCCGCGCTGGCGTCGCGCTCGTCGCTCAGCAAGCACCAGCACGCAGTGCACCGCGGTGTGAGGCCTCCGCCCCGACACGTGTGCGACACTTGCGGGAAGGCTTTCCGGGGTAAGAGTGTGTTAACAAACCACGTGCGCACGCACACGGGAGAGAAGCCGTTCGAGTGCGGCGAGTGCGGGCGCAGGTTCACGCAGAGGACGGCCATGCGGACACACGTCAAACTTGTGCATCTCAAGCTGAGGAAGACTGCTAAGGTGAAGCCCGAGGTTCCCTTAGAGGTGCAGTCTCCCAAGCTAGATGTGTTCAAACCGGAGCCGCTACTGGAGCCCTGGAGACAGCCGTGCGATGTCTACTTCCATGTCACCGCAGGCCCCTGA
- Protein Sequence
- METMSLGNEADIKLDFESAKAICRCCLMTERRMHNAVMFEAFFKDLAGINVTESDGLPQWLCYECAILLQKSVRFKHKVLRAHTMLYEYLTRCAPFPIEAQDEELSKYASPHLSTTSVLTIDTVGKGKAGYQEVLEHEKQVQSSGLDDIDIQMISKIEEDIVKEENGFSDYDDNITLEEFRSVATKMTEDDIASLLQDTGHVGIKEEPPIKTRKTKEVKVKKKKKETETAPEAGITVETKSSIRKPIELDPTKIRIVTLNPEEQIKQREEESKAGLKFPFKCNLCHKGFNFESKLQNHMSKHSPSRGPYECKLCRMHLPTSYSFNVHSLIHNRRYECVACGRRMIDRASIIDHYRFQHEGFLTLFTCHLCGKVSNNNKTHRGHMRNHHSGDRPKCDQCGKTFINKDSLVEHQQIHQGIKNYECPICNKRFRTRTQIKHHQLTHTDVKDYYCVECDVRFKSAHSLRQHLQKSLKHRDKQSLKFSCPRCPARFPCARSLSAHASVQHDGVRAHVCPECGAALASRSSLSKHQHAVHRGVRPPPRHVCDTCGKAFRGKSVLTNHVRTHTGEKPFECGECGRRFTQRTAMRTHVKLVHLKLRKTAKVKPEVPLEVQSPKLDVFKPEPLLEPWRQPCDVYFHVTAGP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01533326;
- 90% Identity
- iTF_00425742;
- 80% Identity
- -