Cpyr018596.1
Basic Information
- Insect
- Cosmia pyralina
- Gene Symbol
- -
- Assembly
- GCA_946251865.1
- Location
- CAMIUE010000637.1:179194-181353[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-07 5.6e-05 24.1 0.0 2 36 19 53 18 61 0.89
Sequence Information
- Coding Sequence
- ATGCCGCGTATATACAAACCTGATCCTAGGGGGAAAAGGTATAGAAAGTACGATGAAAACATTATAAATGAAGCTGTTGCCGCATATGCGAATGGCAAGTTCTCTTTAAAGGAGATAGCTGAGAAATATGATATCGATAAATCTGTACTTTATAGACACAGTGTCAAAACTATGAAAAAACAAGGAGGGCAAACTATTTTAACAAACGAAACTGAAGACTGCatgataaaatatattaatatatgtgCGGAATGGGGATGCCCTTTAGATGCATTGGATTTGAGGTATATTGTTAAGGCTTATCTTGACCAAGTGGGCCGGACAgtgctaaaatttaaaaataatttaccagGACCCGATTTCGTCGCGGGTTTCCTAAAACGTCATAAAAACCAAATTTCCCAAAGATATAGTCAAAACATTAAGAAAAAAAGGGCAGAAGTTTCACCAAATACGATCAAAGAGTATTTCAAGGAGTTAGAAGAGTCATTGGCAGGCATAAATCCGAGCAATATAATAAACTACGATGAAACAAATTTGACCGACGACCCAGGAcgcaaaaaaatcataactaaaCGAGGATCGAAGTATCCAGAGAGGGTAATGAATAGTTCAAAGTCTTCAACTTCATTGATGATAGCCGCTACAGCCGACGGCGTTTTACTGCCACCGTATGTGGTGTACAAGGCTCTGAATTTGTATGACACATGGACTCAAAACGGACCACCAGGAGCAAGATATAATCGCACGCAATCCGGTTGGTTTGATGCAACTATATTTGAAGATTGGATTAAGACGATCATTATACCTTATTTCAAAGATAAAGTTGGAGAAAAAGTCCTAATAGGCGATAACCTATCATCGCATTTATCTATGGAGACAATAAAACTGTGCCACGAGCAAAATATATCGTTGGTTTTTTTACCAGCGAATAGCACACATCTGACGCAGCCTCTCGATGTGGCTTTCTTCAGACCTATGAAGATAGCATGGCGAAACGTAGTattaaaatggaaaaaaaccGACGGAAAAAACCAAGCGACGATTCCAAAGGGATGTTTCCCTAAACTTTTATGTAAATTAATGAAAGAGCTTAGTGACAACAGTAAGACTAATATAATGGCAGGATTCAAGAAAACAGGAATATATCCGATTAATGAAGAAGAGGTTTTAAGCAGACTACCTGAAGTGcaaaacaatgaaaataaatCTATAATAGAAAAATCCGTTCTAGATCTGCTAAAGGAGATGAGATATGGAACCATGAACATAACCGAACCAAAAAGGAAAAAGAAATTGGAAATAATACCTGGACGAAGCGTTGGTACTGAGAGTGAAGACTACATAGAAACAGAAGAAGAGGAAAGCCAACAGAAAACAAAAAAGAGAAGACTACTGTCATCcaaaataacacaaaacaacaaagaaaatactACAACGAATACTTACGATggcaaagaaaataataaatataagggAAAAGGTATagggaaaaaaactaaaacacaagaTCAGAATATTGCTGAAAAggaaaatatacagaaaaacGGACAAGACActgaaaaaatattacttaacacAATAAATGACTTTGATTTTATAGCAAACAATTCCATAGAAAGAATGCCTATTGTATTTGAAGACATGTTAGTATGTGGAAatgaaattgttataaataacatacaaacaaacgagTTGCAGAATAATACCGGAATAGAAATGATTGCTTTAAATGACATACAAATAAACGAGATGCAGAATGATACCGAAGAAGAAATGATTACTATAAATGACGTACAACTAAACGAGATGCAGTTTAATACCGAAGAAGAAATGATTACTATAAATGACATACAACTAAACGAGATGCAGAATGATACCGGAGTAGAAATgacttataaacaaaataatgcaaccgaaaaaaataaaagaaaactgaAAATTATATCGAATGAAAAGGTATCAGATATTACTACGATGAAAAAAGTTTCTTTGAATAAGtgcaaaaaaataagtaaaaattcgtgtcttaaaattttaagagatAAAATTGATAACATAAGTCGTCCTGGTCCAAGCGGGTTACAAACTCGGCGAACATCGTATTACAAAAGCGATAATGATATTCTGAAAGATTTAATGGACAGTGATGATGAATaa
- Protein Sequence
- MPRIYKPDPRGKRYRKYDENIINEAVAAYANGKFSLKEIAEKYDIDKSVLYRHSVKTMKKQGGQTILTNETEDCMIKYINICAEWGCPLDALDLRYIVKAYLDQVGRTVLKFKNNLPGPDFVAGFLKRHKNQISQRYSQNIKKKRAEVSPNTIKEYFKELEESLAGINPSNIINYDETNLTDDPGRKKIITKRGSKYPERVMNSSKSSTSLMIAATADGVLLPPYVVYKALNLYDTWTQNGPPGARYNRTQSGWFDATIFEDWIKTIIIPYFKDKVGEKVLIGDNLSSHLSMETIKLCHEQNISLVFLPANSTHLTQPLDVAFFRPMKIAWRNVVLKWKKTDGKNQATIPKGCFPKLLCKLMKELSDNSKTNIMAGFKKTGIYPINEEEVLSRLPEVQNNENKSIIEKSVLDLLKEMRYGTMNITEPKRKKKLEIIPGRSVGTESEDYIETEEEESQQKTKKRRLLSSKITQNNKENTTTNTYDGKENNKYKGKGIGKKTKTQDQNIAEKENIQKNGQDTEKILLNTINDFDFIANNSIERMPIVFEDMLVCGNEIVINNIQTNELQNNTGIEMIALNDIQINEMQNDTEEEMITINDVQLNEMQFNTEEEMITINDIQLNEMQNDTGVEMTYKQNNATEKNKRKLKIISNEKVSDITTMKKVSLNKCKKISKNSCLKILRDKIDNISRPGPSGLQTRRTSYYKSDNDILKDLMDSDDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00850674;
- 90% Identity
- iTF_00000276;
- 80% Identity
- -