Ccas025268.1
Basic Information
- Insect
- Coronaproctus castanopsis
- Gene Symbol
- Ssb-c31a
- Assembly
- GCA_032883995.1
- Location
- CM065053.1:56590892-56591577[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.45 2.4e+04 -3.6 0.2 5 11 5 11 3 13 0.60 2 2 1.8e-28 9.7e-24 84.1 0.5 2 51 50 99 49 100 0.96
Sequence Information
- Coding Sequence
- atgGGCAAGAACAAAAAGAAGAAggtatcatcatcatccgatTCTGATACCAGTGTAGAAGatAAAACTCCGCCACCTGCTAAAAAACCAAAGACCGCCACTACTAGTAGCAGTAAAAAATCGTCTAATGATGAAGAACCATCCTGGTGTTTGGAAAAAAATCGGTTTGTTAAAGTAAGAGAATTTCGTGGCAAGGTAATGGTCGATATTCGCGAGTATTACGAAAAAGACGGTGATCTTCTTCCTGGTAAAAAAGGGATTGCTTTAAGTGCTATACAGTGGAAGAAGCTGAAAAATTTGGTGGATGAAATAGACGCCAAGGTTTCCGAGTTTTGA
- Protein Sequence
- MGKNKKKKVSSSSDSDTSVEDKTPPPAKKPKTATTSSSKKSSNDEEPSWCLEKNRFVKVREFRGKVMVDIREYYEKDGDLLPGKKGIALSAIQWKKLKNLVDEIDAKVSEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -