Basic Information

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 2e-39 3.5e-35 123.5 6.1 164 275 3 116 1 116 0.97

2 2 0.1 1.8e+03 -0.2 0.0 245 269 131 155 120 162 0.72

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	2e-39	3.5e-35	123.5	6.1	164	275	3	116	1	116	0.97
2	2	0.1	1.8e+03	-0.2	0.0	245	269	131	155	120	162	0.72

Coding Sequence: ATGTTTCTATGGATTTTGTTATCAGGTAAACATTTCGAACGTACAATCTACCCGATAATAAGGCAAAAATTAAGCGTAGCGTTGAACAATTGGCATCCGTCAGATGGTTCGGCTCGTCTTATGTTACAGCCGTGGGTAAGTGTTTTCAGGGATGGACAAATGGATGCGTTTATCGTCAGTAATATTATTCCAAAGTTACAAATTGCTTTACAAGATTTTGTTATTAATCCTCATCGACAACACTTAgaTAATTGGAATTGGGTAATGGAATGGTCTGAAATGATTTCGCCTCTTTCGATGGCCGTACTTTTAGATAAATGTTTCTTTCCGAAATGGATTAAGGTATTAAAATTATGGCTCGGAATGAATCCGAATTACGACGAAGTTAGAAGATGGTACACCGGATGGAAAACAATCATACCAGAATCACTTTTATCACAACCGTTGGTAAAGGATCACTTGCGTAATGCTTTAGAAGCAATGAGTTCATCCGTTGGAGGACCTACAATGACTACTGCGTCAGATATAGAGCAAGCTAACAAAAAACGTGCTCAGGAGaatCTGGCAGAGGCTATACGAACTGCTTCTCAGATTCCGGAAGGATTTAAAGACTTAGTACAAAAACGATGCGAGGAAAGAGGAATATTGTGGATGCCGATCTCGCATAAGTATATGGAAGGTAAACAGGTGTACCGTTGCGGTAAACATCAAGTGTATATAGATAGAAATGTATTATTCGTTAGTCAAGATGGAGGAGCATTTGTACCGATGTCAATTCAAGAATTAATGAATATCGTTGCTTGA
Protein Sequence: MFLWILLSGKHFERTIYPIIRQKLSVALNNWHPSDGSARLMLQPWVSVFRDGQMDAFIVSNIIPKLQIALQDFVINPHRQHLDNWNWVMEWSEMISPLSMAVLLDKCFFPKWIKVLKLWLGMNPNYDEVRRWYTGWKTIIPESLLSQPLVKDHLRNALEAMSSSVGGPTMTTASDIEQANKKRAQENLAEAIRTASQIPEGFKDLVQKRCEERGILWMPISHKYMEGKQVYRCGKHQVYIDRNVLFVSQDGGAFVPMSIQELMNIVA

Sequence clustering based on sequence similarity using MMseqs2