Basic Information

Insect: Cordilura impudica
Gene Symbol: -
Assembly: GCA_963682025.1
Location: OY821518.1:91267679-91287055[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 6.8e-06 0.0021 21.1 1.3 1 23 193 215 193 215 0.97

2 18 0.00013 0.04 17.1 0.5 1 23 221 243 221 243 0.97

3 18 5.8e-05 0.018 18.2 0.6 1 23 249 271 249 271 0.98

4 18 4.3e-06 0.0013 21.7 3.0 1 23 277 299 277 299 0.97

5 18 5.7e-05 0.018 18.2 4.7 1 23 305 327 305 327 0.99

6 18 0.0001 0.032 17.4 5.7 1 23 333 355 333 355 0.97

7 18 4.9e-07 0.00015 24.7 4.3 1 23 361 383 361 383 0.98

8 18 1.8e-07 5.6e-05 26.0 2.4 1 23 389 411 389 411 0.97

9 18 0.00011 0.033 17.3 6.7 1 23 417 439 417 439 0.97

10 18 0.00019 0.057 16.6 6.5 1 23 445 467 445 467 0.98

11 18 1.7e-05 0.0051 19.9 4.5 1 23 473 495 473 495 0.98

12 18 6.2e-05 0.019 18.1 8.3 1 23 501 523 501 523 0.98

13 18 3e-06 0.0009 22.3 7.9 1 23 529 551 529 551 0.98

14 18 1.1e-06 0.00034 23.6 7.7 1 23 557 579 557 579 0.98

15 18 0.00034 0.11 15.8 9.5 1 23 585 608 585 608 0.95

16 18 0.00029 0.089 16.0 0.5 1 23 614 636 614 636 0.97

17 18 0.0003 0.091 15.9 4.7 1 23 646 668 646 668 0.98

18 18 1.5e-05 0.0047 20.0 1.6 1 23 674 697 674 697 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	6.8e-06	0.0021	21.1	1.3	1	23	193	215	193	215	0.97
2	18	0.00013	0.04	17.1	0.5	1	23	221	243	221	243	0.97
3	18	5.8e-05	0.018	18.2	0.6	1	23	249	271	249	271	0.98
4	18	4.3e-06	0.0013	21.7	3.0	1	23	277	299	277	299	0.97
5	18	5.7e-05	0.018	18.2	4.7	1	23	305	327	305	327	0.99
6	18	0.0001	0.032	17.4	5.7	1	23	333	355	333	355	0.97
7	18	4.9e-07	0.00015	24.7	4.3	1	23	361	383	361	383	0.98
8	18	1.8e-07	5.6e-05	26.0	2.4	1	23	389	411	389	411	0.97
9	18	0.00011	0.033	17.3	6.7	1	23	417	439	417	439	0.97
10	18	0.00019	0.057	16.6	6.5	1	23	445	467	445	467	0.98
11	18	1.7e-05	0.0051	19.9	4.5	1	23	473	495	473	495	0.98
12	18	6.2e-05	0.019	18.1	8.3	1	23	501	523	501	523	0.98
13	18	3e-06	0.0009	22.3	7.9	1	23	529	551	529	551	0.98
14	18	1.1e-06	0.00034	23.6	7.7	1	23	557	579	557	579	0.98
15	18	0.00034	0.11	15.8	9.5	1	23	585	608	585	608	0.95
16	18	0.00029	0.089	16.0	0.5	1	23	614	636	614	636	0.97
17	18	0.0003	0.091	15.9	4.7	1	23	646	668	646	668	0.98
18	18	1.5e-05	0.0047	20.0	1.6	1	23	674	697	674	697	0.96

Sequence Information

Coding Sequence: ATGCAACACATATCATCAGCTTCAACAGTGGCTCCTGCTACTGCTGGAGCTACAACCATCACCCTCGGTACACCCAAGACCGAAATCAAAGATGATGGCAGTGTTGTTATGAGCGGCAAGCTACACCCTGGCATTGAAATGTATAAAGTTAATATTGAAGATATATCGCAACTATTTAACTATCATGAGGTATTTGGTAAAATACATGCTTCCCTACCAACAGTATCTACCAATAGCAATATGGCTACTGTAGTGTCAGCTACAACTACTAGTGCCAATGATGCGAATAATGTAACTGGGGGAGTGACTGTGGTAACAAACAGTGGTGCACCTAATACTGAACCGATCAGCACAAGTACTGTAGGCGGTAGCGGGGTTGTAGCTACCACAAGTAGCTCTAATTTAACTACGGCCATAGCAAACAATTCGAATGTGACGGTGGCAACAGCGACCACCACTTCCGGTGGTGCTGCTGTTGGGGGCCTGTTAATGCCGAAAATGGAAGGTGGCATTGCGAGCGTAGAACAAAATACCGTTACTTTAGCGCCTGATGGTACAGTAGTCTCCACTGGCGAACATGTGTGCGATATATGCGGTAAAATGTTTGCATTCCGCTATCAATTAATTGTTCATCGTCGTTATCATACCGAACGAAAACCATTTAATTGTCAAGTTTGTGGTCAGGGTTTCTTTACCTCTCAAGATCTTACACGTCATGGTAAGATTCACATTGGCGGTCCTATGTTTACTTGCTTAGTGTGTTTTAATGTTTTCGCCAATAATGCCTCCTTGGAACGCCACATGAAACGTCATTCCACGGACAAACCATTTGCCTGTACTATATGCCAGAAGACGTTTGCACGTAAAGAACATTTGGAAAATCATTTTCGTTCACACACTGGCGAAACTCCGTTTCGGTGTCAGTACTGTGCTAAAACATTTACACGTAAGGAGCATATGGTGAACCATGTACGAAAACATACGGGAGAGACACCACATCGTTGCGATATTTGTAAGAAATCCTTTACGCGCAAAGAGCATTATGTTAATCACTATATGTGGCATACTGgtcaaacacctcatcaatgtGAAGTGTGTGGCAAAAAATACACACGCAAGGAACACTTAGCAAATCATATGCGTTCCCATACGAATGACACTCCATTTCGTTGTGAAATTTGTGGCAAGAGTTTTAGTCGTAAAGAACATTTTACCAATCACATACTATGGCATACAGgAGAAACTCCCCATCGTTGTGATTTTTGTTCGAAAACGTTTACACGTAAGGAACATTTGCTAAATCATGTACGTCAACATACTGGAGAATCACCACATCGTTGTTCATATTGTATGAAAACATTTACGCGCAAAGAACACTTGGTGAATCATATACGTCAACATACCGGTGAAACACCCTTTAAGTGTACTTATTGCACCAAAGCCTTTACACGCAAAGATCATATGGTTAATCATGTGCGTCAACATACTGGAGAATCGCCACATAAATGTACGTTCTGTACAAAAACCTTTACGCGCAAAGAACATTTAACGAATCATGTTCGTCAGCATACAGGAGAATCACCACACCGATGCACTTATTGCAAAAAAACTTTTACGCGTAAGGAGCATCTTACGAATCATATACGTTTGCATACTGGTGATTCGCCACACAAATGTGAATACTGCCAAAAGACGTTCACACGTAAGGAACATCTGAATAATCATATGCGCCAACATTCTAGTGATAATCCGCATTGTTGTAATGTGTGTAATAAACCATTTACGCGAAAGGAACATTTAATTAATCATATGTCACGTTGTCATACGGGTGATCGACCATTTGCCTGTGAAACTTGTGGAAAATCTTTCCCGCTTAAAGGCAATTTATTGTTTCATCAACGTAGTCATACCAAGGGTCAAGAAATGGAACGACCATTTACATGTGAAAAATGCCCTAAGACTTTTATTTGCAAAGgtCACTTGGTGTCTCATATGCGTTCTCATTCCGGTGAAAAGCCACACGCTTGCACTTTGTGCAGTAAAGCCTTTGTGGAAAGAGGAAATTTGAAGCGTCACATGAAAATGAATCATCCAAATGCTCCCATGCCACCACCTCCAGTGCCTCATCCAGTTATTCCAGCAGGTGTTTTGCCCCAAATAAAGCAGGAAGTTAAACCAGTTATAAGTGAATTAACTCCAACTATGCATACCATACAACAAATAACAGCAGGAGCAGCAGCAGTGGAAAATGCAGTGCAATTAACAACTGGTTTGGTGCCTATGGTAACTTCTACCATAACGTCGCATacaacacaaaaacaacaatcgCCCCAGTCACAGACTCaagcacaacaacaacaacagctgcaACAGCAACAAGTAGTGACTACACATCAACAGGTTGCAGCTCATCAGCAAGTcttacaacaacagcagcaacaacaacaacaacaacagcagcagcaacaacaacaacagcagcagcagcaacaacaacagcagcaacaacaacaaaatcaattACTACAGCTATCTATTCAACATGCAGCTTCAGCAGCACATCAACAGTTACAACAACATCAAGAGCAACAACGCcaacatcatcatcaacaacagcagcaacagcaacaacaagctcatcatcagcaacaacaaacaGCTACAAATGTTACCGTCGTTTCTAATGCTCAtccacaacagcaacaacaaataaCACAaactcaacagcaacaacaacaacaacagccacCACCAGTGCCAATCGCTCTTATACAAACCGAACAGGGAGCTTTGGCCCGTGCTGCCATGCAACAATTACAGCATAATATGCCAACAAATGTTGAACAACATCCAGTTGTTTACTAA
Protein Sequence: MQHISSASTVAPATAGATTITLGTPKTEIKDDGSVVMSGKLHPGIEMYKVNIEDISQLFNYHEVFGKIHASLPTVSTNSNMATVVSATTTSANDANNVTGGVTVVTNSGAPNTEPISTSTVGGSGVVATTSSSNLTTAIANNSNVTVATATTTSGGAAVGGLLMPKMEGGIASVEQNTVTLAPDGTVVSTGEHVCDICGKMFAFRYQLIVHRRYHTERKPFNCQVCGQGFFTSQDLTRHGKIHIGGPMFTCLVCFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLENHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTFCTKTFTRKEHLTNHVRQHTGESPHRCTYCKKTFTRKEHLTNHIRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQEMERPFTCEKCPKTFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPNAPMPPPPVPHPVIPAGVLPQIKQEVKPVISELTPTMHTIQQITAGAAAVENAVQLTTGLVPMVTSTITSHTTQKQQSPQSQTQAQQQQQLQQQQVVTTHQQVAAHQQVLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQNQLLQLSIQHAASAAHQQLQQHQEQQRQHHHQQQQQQQQQAHHQQQQTATNVTVVSNAHPQQQQQITQTQQQQQQQQPPPVPIALIQTEQGALARAAMQQLQHNMPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00892968;
90% Identity: -
80% Identity: -