Cimp029622.1
Basic Information
- Insect
- Cordilura impudica
- Gene Symbol
- osa
- Assembly
- GCA_963682025.1
- Location
- OY821517.1:333990354-334001348[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.64 1.4e+04 -0.7 0.1 13 46 305 336 300 337 0.81 2 2 3.3e-14 7.1e-10 41.9 0.0 2 51 564 613 563 614 0.94
Sequence Information
- Coding Sequence
- atgaaTAAAGTTTTACCCTGGGagcattttgaaaatttatacaaAGAACTCATAGGTCAAAATAGTAACGATAGTTCTAGCGGCGGTGGTCATAGTGGTTTGGGTTCTGGTCCGCCGGGCACACCAAATCCCCAGCAAGTTATGCGCCCTACTCCCTCACCCACAGGCTCTTCGGGTTCTCGTTCTATGTCTCCAGCAGTGGCACAAAATCATCCTATATCACGGCCCTCTAGTAATCAATCTAGTAGCGGTCCTATGCAACAGCCTGGAGGCGGTCCTCCGGGTCCTCCATCATCTCAACAAACATCGCAACAACAGCAATCTCAACAATGTCCCGGAGTTCCAAACTCTTCATCTTCAGCGAGTAATTCACCTCAACAGCTAGGCGGTGGCCCTAGTACAGGTGGCGGTGGTCCAACAGGTTCTCAACAACAGTCCTCACCACTGCCACCAAATCAGAATGTAAATAATATACCGACACAGCCACCACCACCTCAGGGTCCTGGTGGTGGTCCCGGTGGTTATCCATTACCGCCTCATATGCATGGCAGCTATAAAATGGGCGGGCAAAGTCCCGGTCCTCAAGGTATGATTTCTGGCTATCCACCACCGCCCCAACAAGCTCAACAATACTCTCAAGGTGGCTATCCGCCAAGACCGCAATATCCACCAGGTGGTTATGGTGCGCCCACGCCACCACCATCCAGCCAGGCCTCAGGTGTCAATAGTATGCCACCCGGTGCTGGACCTCAACAATATCCCGGCGGCAGGCCTATGCCAAATCACAGTGGTCCTGGGCAATATCCACCGTATCAAAACTGGGTGCCACCTTCACCGCAACAAAGTGGTCCTGGTGGTCCGCCTCCCGGTGGTCCTGGTGCTGCAGGTGGTGCTCCTTCCATGGGCAATCATGTACAGGGTAAAGGTACTCCACCCCCACCGCAAGGTAGTGGTTCTCCACGACCGCTCAACTATTTAAAACAACATTTACAACACAAGGGCGGTTATCCGGGACCTGGAGGTCCTCCCGGCGGTCCACCTCAAGGCTATGGTAATGGTCCCGGTATGCATCCCGGTATGCCAATGGGTCCACCCCATCACATGGGACCACCACATGGTCCAACTACAATGGGTCCACCACCCACTACCCCACCACAATCGATGATGGCTGGCGGCGTTGGAGCCGGTGTAGAACCAGGCGGTCCACCACCACCACCAGATCATATATCACAGGATAATGGCTTAAGTTCATCTTCGTCGAGTTCAGCCCCAGGCGGACCACCACATCCGGTCACTTCGATAGTAACAACTGGACCGGATGGTGCTCCAATGGACGACGTTAGCCAGCAGAGTACAATATCAAATGCATCAGCCGCATCCGCTGAAGATCCTCAATGTACTACACCAAAATCGCGAAAAAATGATCCATATGGCCAAAGTCATTTGGCACCACCCAGTACTTCACCTGGTGGTGTTGGAGTTATACCACATCCAGGACACCCAGGAGAAGAATATGAAATGAATTCTCCACCCAATTGGGCCAGAACACCAGCCAGTCCgAGTTTCAATAGTCATGTTCCTCAACCAGATACTTTCCGTGCAACGGCTACACCAATATCTACAGTCTCAACTTCTGCCAAGAAATCCGATAGTCTATGTAAGCTCTATGAAATGGATGATAATCCCGAACGCCGTGGATGGCTTGATAAATTAAGAGGTTTTATGGATGAGAGACGTACACCAATAACCGCTTGTCCGACCATCTCGAAACAGCCGCTCGATCTTTATCGTTTATATTTGTATGTTAAAGAGCGAGGCGGATTCGTCGAGGTATGCAAGGTGCCGTAG
- Protein Sequence
- MNKVLPWEHFENLYKELIGQNSNDSSSGGGHSGLGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPSSNQSSSGPMQQPGGGPPGPPSSQQTSQQQQSQQCPGVPNSSSSASNSPQQLGGGPSTGGGGPTGSQQQSSPLPPNQNVNNIPTQPPPPQGPGGGPGGYPLPPHMHGSYKMGGQSPGPQGMISGYPPPPQQAQQYSQGGYPPRPQYPPGGYGAPTPPPSSQASGVNSMPPGAGPQQYPGGRPMPNHSGPGQYPPYQNWVPPSPQQSGPGGPPPGGPGAAGGAPSMGNHVQGKGTPPPPQGSGSPRPLNYLKQHLQHKGGYPGPGGPPGGPPQGYGNGPGMHPGMPMGPPHHMGPPHGPTTMGPPPTTPPQSMMAGGVGAGVEPGGPPPPPDHISQDNGLSSSSSSSAPGGPPHPVTSIVTTGPDGAPMDDVSQQSTISNASAASAEDPQCTTPKSRKNDPYGQSHLAPPSTSPGGVGVIPHPGHPGEEYEMNSPPNWARTPASPSFNSHVPQPDTFRATATPISTVSTSAKKSDSLCKLYEMDDNPERRGWLDKLRGFMDERRTPITACPTISKQPLDLYRLYLYVKERGGFVEVCKVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00258651;
- 90% Identity
- iTF_00258651;
- 80% Identity
- -