Cvic002472.1
Basic Information
- Insect
- Calliphora vicina
- Gene Symbol
- osa
- Assembly
- GCA_958450345.1
- Location
- OY288232.1:50746073-50748349[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.59 3.5e+03 -0.6 0.0 13 46 302 333 296 334 0.81 2 2 1.2e-14 6.9e-11 43.4 0.0 3 51 563 611 561 612 0.94
Sequence Information
- Coding Sequence
- atgaATAAAGTTTTACCCTGGGAGCATTTTGAAAATCTatataaagAACTAATAGGTCAAAATAGTAACGATAGTTCTAGTGGTGGTGGCCACAGTGGTTTAGGCTCTGGTCCACCGGGTACACCAAATCCTCAGCAAGTTATGCGTCCCACACCCTCGCCCACAGGCTCTTCGGGTTCACGTTCTATGTCTCCAGCAGTGGcaCAAAATCATCCTATATCGAGACCCTCTAGTAATCAATCTAGCAGTGGTCCCATGCAACAGCCTGGGGGTGGACCTCCAGGTCCACCATCTCAACAAACATCGCAACAACAGCAATCTCAACAAGGTCCGGGAGTTCCAAACTCTTCCTCTTCGGCGAGTAATTCGCCCCAACAGCAGCAGGGACCGCCCAGTGGTGCAGCAGGTGGTCCGCCAGGTTCTCAGCAACAGCCACCACCGCCACCAAATCAGAATGTCAATAATCTGCCCTCACAGCCATTGCCACCTCAGGGTCCTGGTGGGGGCCCCGGTGGCTATCCATTACCGCCTCATATGCATGGCAGCTATAAGATGGGCGGCCAAAGTCCTGGTCCTCAGGGTATGCTCTCTGGTTACCCACCACCACCGCCTCAGCAAGCTCAACAATACTCTCAAGGAAGCTATCCACCACGACCACAATATCCGCCCGGTGGTTATGCTCCCACACCACCTCCATCAAGCCAAGCTTCCGGTGCTAACAGTATGCCACCGGGCAGTGGTCCCCAGCAGTATCCGGGCGGTCGGCCCATGCCAAACCACAGTGGTCCTGGCCAATATCCACCCTATCAGAACTGGGTACCACCCTCGCCACAACAAGGTGGACCCGGTGGACCTCCACCCGGTGGTCCCGGTGCTCCTGGTGCTGCTGCTATGGGTAATCATGTTCAGGGTAAAGGTACACCACCTCCACCACAAGGAAGTGGCTCTCCCAGACCCCTCAACTATCTGAAACAACATTTGCAACATAAAGGCGGTTATCCCGGTGGTCCCGGCGGTCCGCCTCAAGGCTATGGCAATGGCCCTGGTATGCACCCAGGTATGCCTATGGGACCACCACATCACATGGGTCCGCCACATGGTCCGACCACCATGGGCCCACCGCCATCTACACCACCACAATCGATGATGGTTGGTGCTGGTGGCGAAAGCAGTAGCGTTGCTGGTGGACCTCCACAGCCACCACCACCAGATCATATATCACAGGACAATGGTCTGAGTTCAAGTTCATCGAGTTCGGCCCCTGGTGGACCACAACATCCCGTCACTTCGGTAGTCACTACTGGTCCTGATGGTGCTCTCATGGATGAGGCCAGTCAGCAAAGTACAATATCAAATGCATCAGCAGcctCTGCTGAAGATCCCCAATGTACTACACCAAAATCGCGCAAAAATGATCCTTATGGACAAAGCCATTTGGCACCACCCAGTACTTCACCGGGTGGTATAGGAGCTGGGCCGCATCCAGGTCATCCCGGTGAAGATTATGAAATGAATTCACCACCCAATTGGGCTAGAACACCAGCCAGTCCGggTTTCAATAGTCATGTTCCTCAACAAGATACTTTCCGTACAACGGCCACTCCCGTAACCACAGTCGTCTCAGCGTCAGCCAAGAAATCCGATAGTCTTTGCAAACTATACGAAATGGATGATAATCCGGATCGCCGTGGCTGGCTTGATAAATTGCGAGCATTTATGGATGAGAGACGTACACCGATCACCACCTGTCCAACCATCTCGAAACAGCCGCTCGATCTTTATCGTTTATATTTGTACGTTAAAGAGCGAGGCGGATTCGTCGAGGTATGCAAGGTGCCGTAG
- Protein Sequence
- MNKVLPWEHFENLYKELIGQNSNDSSSGGGHSGLGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPSSNQSSSGPMQQPGGGPPGPPSQQTSQQQQSQQGPGVPNSSSSASNSPQQQQGPPSGAAGGPPGSQQQPPPPPNQNVNNLPSQPLPPQGPGGGPGGYPLPPHMHGSYKMGGQSPGPQGMLSGYPPPPPQQAQQYSQGSYPPRPQYPPGGYAPTPPPSSQASGANSMPPGSGPQQYPGGRPMPNHSGPGQYPPYQNWVPPSPQQGGPGGPPPGGPGAPGAAAMGNHVQGKGTPPPPQGSGSPRPLNYLKQHLQHKGGYPGGPGGPPQGYGNGPGMHPGMPMGPPHHMGPPHGPTTMGPPPSTPPQSMMVGAGGESSSVAGGPPQPPPPDHISQDNGLSSSSSSSAPGGPQHPVTSVVTTGPDGALMDEASQQSTISNASAASAEDPQCTTPKSRKNDPYGQSHLAPPSTSPGGIGAGPHPGHPGEDYEMNSPPNWARTPASPGFNSHVPQQDTFRTTATPVTTVVSASAKKSDSLCKLYEMDDNPDRRGWLDKLRAFMDERRTPITTCPTISKQPLDLYRLYLYVKERGGFVEVCKVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00370758;
- 90% Identity
- iTF_00370758;
- 80% Identity
- -