Basic Information

Insect: Coptotermes formosanus
Gene Symbol: -
Assembly: GCA_013340265.1
Location: BLKM01001294.1:2873409-2890249[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0074 0.36 10.9 1.4 1 23 286 308 286 308 0.97

2 14 0.15 7.3 6.8 0.1 2 23 315 339 314 339 0.89

3 14 0.0013 0.064 13.3 0.3 1 23 345 368 345 368 0.98

4 14 9.7e-05 0.0047 16.8 4.2 1 23 374 396 374 396 0.96

5 14 1.3e-05 0.00062 19.6 4.6 2 23 403 424 402 424 0.96

6 14 2.3e-05 0.0011 18.8 1.9 1 23 430 452 430 452 0.97

7 14 0.036 1.7 8.8 3.2 3 23 460 481 459 481 0.96

8 14 0.00013 0.0061 16.5 0.7 1 23 507 529 507 529 0.98

9 14 4.1e-07 2e-05 24.3 0.5 1 23 812 834 812 834 0.97

10 14 0.00033 0.016 15.2 4.4 1 23 841 863 841 863 0.98

11 14 0.005 0.24 11.4 0.1 1 23 871 894 871 894 0.98

12 14 3.7e-06 0.00018 21.3 1.7 1 23 900 922 900 922 0.96

13 14 3.9e-05 0.0019 18.1 2.7 1 23 928 950 928 950 0.98

14 14 9.5e-07 4.6e-05 23.1 3.4 1 23 956 978 956 978 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0074	0.36	10.9	1.4	1	23	286	308	286	308	0.97
2	14	0.15	7.3	6.8	0.1	2	23	315	339	314	339	0.89
3	14	0.0013	0.064	13.3	0.3	1	23	345	368	345	368	0.98
4	14	9.7e-05	0.0047	16.8	4.2	1	23	374	396	374	396	0.96
5	14	1.3e-05	0.00062	19.6	4.6	2	23	403	424	402	424	0.96
6	14	2.3e-05	0.0011	18.8	1.9	1	23	430	452	430	452	0.97
7	14	0.036	1.7	8.8	3.2	3	23	460	481	459	481	0.96
8	14	0.00013	0.0061	16.5	0.7	1	23	507	529	507	529	0.98
9	14	4.1e-07	2e-05	24.3	0.5	1	23	812	834	812	834	0.97
10	14	0.00033	0.016	15.2	4.4	1	23	841	863	841	863	0.98
11	14	0.005	0.24	11.4	0.1	1	23	871	894	871	894	0.98
12	14	3.7e-06	0.00018	21.3	1.7	1	23	900	922	900	922	0.96
13	14	3.9e-05	0.0019	18.1	2.7	1	23	928	950	928	950	0.98
14	14	9.5e-07	4.6e-05	23.1	3.4	1	23	956	978	956	978	0.98

Sequence Information

Coding Sequence: ATGGAGGATGTGGATAGGGGCTTAGCCCTAGCATCACTGGATTCTGACAATAGAAGAGACATAAAAGAAATTGTCTCTGCAAGTTCTGCAGCAACAATAGGAGGAGGCATAGATACGTCCATGGTTGTTTATGTGCAGCAGAAGCAGCAAGAACTACCTGTTTCATTAACAagtgcagaaagcagtaattcTGCAGAACAGCAGCTTGATACACTAATGCCACAAAATTTAACTGAAAAAGTGAGTGACAATCTCACAAGTCCAGAACAGCCGCAGCCACTTCCTGAAGAAGATATGGTAGTGAGTTTGTTAGGTTCTGTGGTGACAGACGCTACTAGTGATGACAATTTACTGTCACAACAGCAGGCTGGAGATGGACAAATTCTGTGCGTCACATACATAGTAAATCCTACGTTAGATGAAGTCGGTGAAACTCAGCACCCGTCTGCAAGTGAAATTTCGCAGCGTATGGTTCTGCATGTAGCTGACGATGGGACTACTCTTGTGTTGCCAGCTGAGAATGTGGAAGTGGGAGCATTTGACATCGAGAGTGGGCTTGTACCTCTGACTGTTAATAGCCTGTACTCACTTGCGACAAATGACAGTTTATCTGAAGAATCGTTAACTTCTCCTTTAGTTCTAACTTCTGACCTGAAAAACATAAGCAAAGAGGAAGCAAGATTGAAAAATTGCCCATTTATTGAGATTAATGATCGCAGACGTACTGAACAGGTGATTGGCAGTGAGCTGCATATAGAAGAAAAGCTGGAGGTGCTGGATGCAATGCTAACTCCTGCACCAGAGCGCCCTCGTAAGAAGAAATCAGACTCTGTCACAGAGGATGGAGAAGGGAGTTACATGTGTGACCTCTGTGAGACCACGTTTCCACGGGCCAACCAGTTCTATGGTCATCTGCACTCTCACAGTGGTGAGAGGAAGTGGGAATGCGCAATATGCCCTCACAAGGCAGTGTTTCCAAGTCAGGCATTGCTGCGTCGTCACGAGAGGGAATCTCACTTGAATTTACGACCATATACTTGTGGGGTATGTGCTGCACGTTTTGATCGTGTCTCCCAGCTTAGTTACCATCAGCGTCGCATTCATGCTGGAGAACGTGGCCATGCTTGTCAGATCTGCCATAAGGCTTTCTTCAAGCGATCTGACCTAAAGACACACTTGAATATTCATTTGGGAATCAACAAATGTATCTGTGAGACCTGTGGGAAGAAATTTAATCATGTGTCCAATTTGATTCGACATACAAGGATGCACTCAGGAATAAAGCCATATCCTTGCACTGTATGTGGCCGACGGTTCACCCAGCTCAGTGCCCTTCATCAGCATAAAACATCACATCAGACAAATAAGGATGTTGCGTGCAGCATCTGTCGCAAGATGTTCAAATCACACATGGTGATGCGCAAACATGTGCGCCAGTTTCACAAGGACAAACTGGCTGCATCAGGCAAGGATATCAATTCTGTCCTGAAGATAAAGGATGGTGCACAGAGTAGAAGATTCTACTGCAAAGTGTGTGGGGAGAACTTTGAGTTTTCTGCACTGCTTAGACAGCATGAGAGGCAGCATGAGAAGGAGACCAGCTTCCACTGTAGTTGTTGTGGGCAGGACTATGACACAATGGAGTTGTTGAAGAGCCACTCCTGTCTAACTCCTGAGGAGAGGTTACAAAAACAAGCAGAAGACGAAGCAGAGGCAGAGAGAGTTTCACTGAACTCCCAGTTGGAGTCTCTGCTGCAGGAGCACAGTGGAGCTGAAGAAAGGAATAATGCAGATGGAAGCAGTGGGATTATGAGTGAAATTGTAATCTATGTGACACAAGAGGGGCAGGATGAACCCACCCAGGTTCACATCCAGCCCATGCCTGGTCCAGTCTTAGGCCACATAGATGAACAAAAACCTTTGATACTAGTACCTAGCACAGACCTAGGACTCCAGAAGACTGGGGCTGACAGCCAGCATAAACAAAACCATAAAGATGTAGTAACACTGGGGGATAGTGGAGGTACCTGTAAGATGGAAACAGACCTTGATGCTGCACCACTGCAGTTGGAGTTTTGCAGCTCTGGGATGACCGTTGGCAACAGTGATAAGAACAACAGGAGTGACAAGGCAGATTGCACTAACTCATCTCCTTTGTTTCCCCACAACATGGCAACAATCCTGGGAGGTGACAGCAGCAGTGACAACTTTGTTACAGGTGGTGATGTTCTGGGAGAGCCTAGTCATGACTCTGACTGTGATAACGGCATGCAGAATGTAACAGGAATGATAACTGTTCCAAATAAAGGAGCGATGAAAACTGAAGAGTATGCGGACTTGCTGGTTCCAAAAATTGAAGCTAATGGCATATCATCAGAGTCTGTTCCTGCTCAGAGTAAAACAGTGTCTGCTGTCAAGAAACAAGTGCGAGTGTACCAATGTCCTGAGTGCCCAAAAACATTTGTTAAGAACAGCAACTTCAAACAACACTTAGGTATTCACTTTATTGACCAGCAGCATTACCACTGTCCAACTTGTGGCCAGTTTTTTGCTTGGAAGTCAACACTGaacaaacacatgcacacacacagtgtaggCCCTCTTCCTCGCTACAGATGTGACCTGTGCAGCAAAGAATATGCTGCCCCTACACAGGTTCAGGAACACATTAAACGGGACCATTATAAGCAAAGGCCACATGCTTGTGTTGTTTGTGgtaaaactttttataagaAATATGATCTCAAAATACACGTCAGaacacacacaaaagagcGTCCATATATTTGTGGGACATGTGGGAAGAGTTTCTATCACCTTTCTCACATAATACGTCATGAACGCATTCATTCTGGCCATCGACCGTATCACTGTCCTGACTGCGGCCGTCAGTTCAACCAATCCAGTTCACTAAAGAACCATAGGCAACGTCACAACCAGTGTGTCACAAAGGCTGTTCCAGCTGCAACTGAGCTGGCACCTCTAGATCTGATGCAACCTGAGTTTCCAGATATTGGGCCAGATTCAGTTCCTCTGTATGCAGGAACTGATTTGTAA
Protein Sequence: MEDVDRGLALASLDSDNRRDIKEIVSASSAATIGGGIDTSMVVYVQQKQQELPVSLTSAESSNSAEQQLDTLMPQNLTEKVSDNLTSPEQPQPLPEEDMVVSLLGSVVTDATSDDNLLSQQQAGDGQILCVTYIVNPTLDEVGETQHPSASEISQRMVLHVADDGTTLVLPAENVEVGAFDIESGLVPLTVNSLYSLATNDSLSEESLTSPLVLTSDLKNISKEEARLKNCPFIEINDRRRTEQVIGSELHIEEKLEVLDAMLTPAPERPRKKKSDSVTEDGEGSYMCDLCETTFPRANQFYGHLHSHSGERKWECAICPHKAVFPSQALLRRHERESHLNLRPYTCGVCAARFDRVSQLSYHQRRIHAGERGHACQICHKAFFKRSDLKTHLNIHLGINKCICETCGKKFNHVSNLIRHTRMHSGIKPYPCTVCGRRFTQLSALHQHKTSHQTNKDVACSICRKMFKSHMVMRKHVRQFHKDKLAASGKDINSVLKIKDGAQSRRFYCKVCGENFEFSALLRQHERQHEKETSFHCSCCGQDYDTMELLKSHSCLTPEERLQKQAEDEAEAERVSLNSQLESLLQEHSGAEERNNADGSSGIMSEIVIYVTQEGQDEPTQVHIQPMPGPVLGHIDEQKPLILVPSTDLGLQKTGADSQHKQNHKDVVTLGDSGGTCKMETDLDAAPLQLEFCSSGMTVGNSDKNNRSDKADCTNSSPLFPHNMATILGGDSSSDNFVTGGDVLGEPSHDSDCDNGMQNVTGMITVPNKGAMKTEEYADLLVPKIEANGISSESVPAQSKTVSAVKKQVRVYQCPECPKTFVKNSNFKQHLGIHFIDQQHYHCPTCGQFFAWKSTLNKHMHTHSVGPLPRYRCDLCSKEYAAPTQVQEHIKRDHYKQRPHACVVCGKTFYKKYDLKIHVRTHTKERPYICGTCGKSFYHLSHIIRHERIHSGHRPYHCPDCGRQFNQSSSLKNHRQRHNQCVTKAVPAATELAPLDLMQPEFPDIGPDSVPLYAGTDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01289161;
90% Identity: iTF_01289161;
80% Identity: -