Basic Information

Insect: Coproporus ventriculus
Gene Symbol: -
Assembly: GCA_027574865.2
Location: JAODAH020036415.1:31604-36909[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 7.8e-05 0.0074 17.1 2.4 1 23 377 399 377 399 0.97

2 18 3.1e-05 0.003 18.3 1.2 1 20 405 424 405 427 0.94

3 18 5.8e-06 0.00055 20.6 1.4 1 23 433 455 433 455 0.98

4 18 1.3e-05 0.0013 19.5 4.4 1 21 461 481 461 483 0.95

5 18 2.4e-05 0.0022 18.7 4.6 1 23 489 511 489 511 0.99

6 18 2.4e-05 0.0022 18.7 5.3 1 23 517 539 517 539 0.97

7 18 2.4e-07 2.3e-05 25.0 5.0 1 23 545 567 545 567 0.98

8 18 8.8e-08 8.3e-06 26.4 2.7 1 23 573 595 573 595 0.98

9 18 6.5e-05 0.0061 17.3 6.7 1 23 601 623 601 623 0.97

10 18 1e-05 0.00099 19.8 5.5 1 23 629 651 629 651 0.97

11 18 4.2e-07 3.9e-05 24.2 2.8 1 23 657 679 657 679 0.98

12 18 5.9e-06 0.00055 20.6 7.9 1 23 685 707 685 707 0.98

13 18 2.5e-05 0.0024 18.6 9.1 1 23 713 735 713 735 0.98

14 18 1.5e-05 0.0014 19.3 7.7 1 23 741 763 741 763 0.98

15 18 9.8e-06 0.00093 19.9 7.1 1 23 769 791 769 791 0.97

16 18 3e-05 0.0029 18.4 0.9 1 23 797 819 797 819 0.98

17 18 0.023 2.2 9.3 5.1 1 23 829 851 829 851 0.98

18 18 1.1e-06 0.0001 23.0 1.3 1 23 857 879 857 879 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	7.8e-05	0.0074	17.1	2.4	1	23	377	399	377	399	0.97
2	18	3.1e-05	0.003	18.3	1.2	1	20	405	424	405	427	0.94
3	18	5.8e-06	0.00055	20.6	1.4	1	23	433	455	433	455	0.98
4	18	1.3e-05	0.0013	19.5	4.4	1	21	461	481	461	483	0.95
5	18	2.4e-05	0.0022	18.7	4.6	1	23	489	511	489	511	0.99
6	18	2.4e-05	0.0022	18.7	5.3	1	23	517	539	517	539	0.97
7	18	2.4e-07	2.3e-05	25.0	5.0	1	23	545	567	545	567	0.98
8	18	8.8e-08	8.3e-06	26.4	2.7	1	23	573	595	573	595	0.98
9	18	6.5e-05	0.0061	17.3	6.7	1	23	601	623	601	623	0.97
10	18	1e-05	0.00099	19.8	5.5	1	23	629	651	629	651	0.97
11	18	4.2e-07	3.9e-05	24.2	2.8	1	23	657	679	657	679	0.98
12	18	5.9e-06	0.00055	20.6	7.9	1	23	685	707	685	707	0.98
13	18	2.5e-05	0.0024	18.6	9.1	1	23	713	735	713	735	0.98
14	18	1.5e-05	0.0014	19.3	7.7	1	23	741	763	741	763	0.98
15	18	9.8e-06	0.00093	19.9	7.1	1	23	769	791	769	791	0.97
16	18	3e-05	0.0029	18.4	0.9	1	23	797	819	797	819	0.98
17	18	0.023	2.2	9.3	5.1	1	23	829	851	829	851	0.98
18	18	1.1e-06	0.0001	23.0	1.3	1	23	857	879	857	879	0.97

Sequence Information

Coding Sequence: ATGAATGCTAATGAGAACGGCCCTATGCCAGGGACACATACGTCCAATGAGACTAATGAAAATACGCAGCGCCCTCCTCCAGCAACAACTTCTGCAACCGACTTGCGGGTAAATACAACAGCTTTAAATGCCGTGGCTTTAAGCAGTGTTGCTAAATATTGGGTCTTAACAAATTTACTTCCTGGACCAATTCCACAAGTTTCTGTTTATGGCTTGCCAGGAACTGGACGTACAGAAAACCAAGGGAAGATAACAcaggaaTCAATGTTGCCTCAACATGGGAATATAATCCCTTCGGATAACATTCTCCTCCCACACAATACACAGATCCCATCAATCTCAACGAATCTCACAATACCAACCAGTACAATGCATATTGATGCTCAACAAAATGGGGGCCAACATGGGATCCAAAATCATCAATCTTCCGAAAACCAAACAATGGTTTCACAATCGCAACATGGACAAATGCAGCAGCCGCAGcaacaacaaaatcaaaatatggtGCAGGTACAAGTACAAGATAATCTTGTATCAGTAATCGAGGAGAGTAAAGATCAAAAAGATATAATTGCCTCACAATTAGCTCAAGCTCAATTGCAACTCAATGAAAATCAGCAAGCTTTAGCTGTTCAACAGCTTCAACAACTGCAAGTACAACAAGTCCTTGATAACGTAGTAAGAATTGATAACGAACAAAATCAGAACAACGATGATGATCCCATGCAGATTAAAGATGAAAAGGTCCTGCAGaattgcacaaaattttttagttgctTACCAGAAGTTAAAGGAAATCTCATGGATGTCCGCACTGCTGATGGAAGCATTGTAAAGATCTCCGCAGgatTACAAGAGCAAGAAATGGCTAAAACTATTGGTGTGGAGATGGTCCAGAATATGTATAAAGTAAATGTTGATGAAATTAACCAACTCCTTGCATACCATGAGGTTTTTGGGAAATTACAAGGGGAAATTACTGGCGCAGCAACCActaatatttcacaaaataataGTGGGGGAAATATACAGGGTGTCAACAATATTCCAGTAACTAAAATGGATACCGAAGAAGCATCAACTAGTGGAATTAATGCAGACAGTCCCCCTGCAGTAATTGCAGGAACCCACGTTTGCGATTTGTGcggaaaaatgtttcaatttcgTTACCAATTGATTGTCCACCGTCGTTACCACACTGAACGTAAGCCTTTCACTTGTCAAGTATGTGGAAAAGCATTTACTAATGCAGCTGAATTAAGTCGCCATGGAAAGTGCCATCTCGGAGGAAGCATGTTCACATGCACAGTTTGTTTCCATGTTTTTGCAAATGCAGCCTCTTTAGAACGCCATATGAAGCGTCATTCAACTGATAAACCATATACCTGCAATATTTGTGGGAAGTCCTTTGCTCGAAAAGAACATTTAGATAACCACACAAGGTGTCATACTGGAGAAACTCCGTATCGTTGTCAGTACTGTGCTAAAACTTTCACGAGAAAAGAGCATATGGTTAATCATGTTCGGAAACACACAGGGGAGACTCCACATCGGTGTGATATTTGTAAAAAGTCCTTTACAAGAAAAGAACATTTTATGAATCATGTTATGTGGCATACTGGTGAAACACCTCATCAATGTACAATTTGTGGgaaaaaatatacaagaaaGGAACATCTTGCAAATCATATGAGATCGCATACCAATGATACACCATTTAGGTGTGAAATTTGTGGTAAATCATTTACTCGCAAGGAACATTTTACGAATCATATCATGTGGCATACTGGAGAAACACCCCATCGATGCGATTTTTGTTCAAAAACTTTTACCCGAAAAGAACATCTTTTAAATCATGTTCGACAACATACTGGAGAATCTCCTCACCGATGTGCATATTGCTCTAAATCCTTCACACGAAAAGAGCACCTTATTAATCATGTTCGGCAACATACTGGTGAAACTCCATTCAGATGCAGCTACTGCCCAAAAGCTTTCACCCGAAAAGATCATTTAGTAAATCACGTCAGGCAGCACACTGGAGAATCTCCGCATAAATGCACTTACTGCACTAAGAGTTTTACAAGGAAAGAACATTTGACTAATCATGTTCGGCAACATACTGGTGAATCTCCTCATAGATGTCACTTTTGTTCAAAGAGTTTTACTAGAAAGGAACACCTTACAAATCATGTTCGGATACATACAGGAGAATCACCTCATCGATGTGAATTCTGTCAGAAAACTTTCACTAGGAAAGAACATCTAACAAATCATCTGCGGCAACATACTGGAGAAACGCCCCATTGTTGCAATGTTTGTTCGAAACCTTTTACTCGAAAAGAACATTTAATAAACCACATGCGTTCACATACAGgTGAACGCCCCTTTACATGTACAGAATGTGGAAAGTCTTTCCCGTTGAAAGGGAATCTATTGTTCCATCAACGTTCACATAACAAAGGTGCTACTGCTGATAGACCTTTTCGATGCGATTTATGCGATAAAGACTTTATGTGTAAAGGCCATTTAGTATCGCACCGAAGATCTCATAGTGGGGAAAGACCTCATTCATGTCCTGATTGTGGTCGGACTTTCGTAGAAAAAGGAAACATGCTGAGacATTTAAGAAAGCATACAACCGACAATCTGCAAGGTCCTGCACCACCAACCCAAGATGGTAATCCGCAGGTACCTCCATCAAATCCAACACCTCAAACAAGCGTAGCAAATGTGCAATTACCCCAAGTGTCTCAAGCCACATCACTAACAAGTCCAGTAAGTTCAGCAGCATCGATTGTGCAACAAACTTTAAATATGCATCAGCAAAACACACATCCAGTTGTTGTGCCGACTGCAAATGGCAACGTTCTTGCCACATATTAG
Protein Sequence: MNANENGPMPGTHTSNETNENTQRPPPATTSATDLRVNTTALNAVALSSVAKYWVLTNLLPGPIPQVSVYGLPGTGRTENQGKITQESMLPQHGNIIPSDNILLPHNTQIPSISTNLTIPTSTMHIDAQQNGGQHGIQNHQSSENQTMVSQSQHGQMQQPQQQQNQNMVQVQVQDNLVSVIEESKDQKDIIASQLAQAQLQLNENQQALAVQQLQQLQVQQVLDNVVRIDNEQNQNNDDDPMQIKDEKVLQNCTKFFSCLPEVKGNLMDVRTADGSIVKISAGLQEQEMAKTIGVEMVQNMYKVNVDEINQLLAYHEVFGKLQGEITGAATTNISQNNSGGNIQGVNNIPVTKMDTEEASTSGINADSPPAVIAGTHVCDLCGKMFQFRYQLIVHRRYHTERKPFTCQVCGKAFTNAAELSRHGKCHLGGSMFTCTVCFHVFANAASLERHMKRHSTDKPYTCNICGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHQCTICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCAYCSKSFTRKEHLINHVRQHTGETPFRCSYCPKAFTRKDHLVNHVRQHTGESPHKCTYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNVCSKPFTRKEHLINHMRSHTGERPFTCTECGKSFPLKGNLLFHQRSHNKGATADRPFRCDLCDKDFMCKGHLVSHRRSHSGERPHSCPDCGRTFVEKGNMLRHLRKHTTDNLQGPAPPTQDGNPQVPPSNPTPQTSVANVQLPQVSQATSLTSPVSSAASIVQQTLNMHQQNTHPVVVPTANGNVLATY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00430030;
90% Identity: -
80% Identity: -