Basic Information

Insect: Coproporus ventriculus
Gene Symbol: Hr39
Assembly: GCA_027574865.2
Location: JAODAH020014709.1:3131-6270[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 2 2.4e+04 -5.8 10.1 76 158 128 223 86 275 0.44

2 5 0.21 2.5e+03 -2.1 3.6 46 114 201 273 189 307 0.59

3 5 3.3e-08 0.00039 20.3 0.0 1 22 388 409 388 415 0.89

4 5 0.00025 3 7.5 0.0 52 114 413 475 407 502 0.85

5 5 2.2e-73 2.6e-69 235.0 0.1 206 408 519 716 509 716 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	2	2.4e+04	-5.8	10.1	76	158	128	223	86	275	0.44
2	5	0.21	2.5e+03	-2.1	3.6	46	114	201	273	189	307	0.59
3	5	3.3e-08	0.00039	20.3	0.0	1	22	388	409	388	415	0.89
4	5	0.00025	3	7.5	0.0	52	114	413	475	407	502	0.85
5	5	2.2e-73	2.6e-69	235.0	0.1	206	408	519	716	509	716	0.98

Sequence Information

Coding Sequence: ATGGCCACAGACATGAGGTCGCCAAACGTATCGGTCACCCCCATTAATGTGGAGCCTTATCCACCAGCAGCTCTCGTAAATGGGGACCACCATCATAACCTACCAAATCATCATAATGGTGAAGTATTGGATAGTTCTGATGCGGAAGTTGCCCAAATCGATTTCCAATCAATGGTGAATATGAGGAATAAGAAGAAACGACCAGGAGGTGGAGATGGTACAGGTGATATACAACGACCTATGTCTTGGGAGGGAGAACTTTCTGACAATGAACAGGACATGTGCATTGACGAAGAAAGTGGCACACAGGTACCTGAAAATTTATCTCTCCAAGCACAAGCAAGTAATAAACATGCACAAGTGCTTGTACAAAATGACTCGAAAGAGAGCCCTGTGATGAGACTGAAACAAACACCAATCGGAAACTACTCCCTGCATTCCACACCAAGCAATTCACCTTTATTATCTCAAAGACATCCCCTCCCAATCCTCGTCCCAAAGGATCTCATCCATAAAGATATGATGCATAAAGCTTTAAATGTGCCACCAACCCCTAGCCCAGATTCAGCAATTCATTCCGCATACAGTGTATTCTCATCTCCGACACAAAGTCCTCTAACACAAAGACATGTTACACTCACGCCGAATCTCAGTAGGAATAACAGTGACGCGTCCCATTCCAGTTGTTGCAGTTACTCTAGTGTATCAGTCTCAGTATCGCCCACGCAACAATTCTCACCCACTCACAGTCCCATTCAGggTCGGCATGTCCCCAATATTCACAGCAGCCCTTTACATCATAATGTTTTATATCGAAGTCTGCAAGAAGATCCAAATTCACAATATCCTCCAGAACAAGAAAATTTGGATGAAAGCGAAGACAAATCAGGATTTGTACATACATCACTTCCAGCACAACCTGGAATTTCACGacaacaattaataaatagTCCGTGTCCTATATGTGGAGATAAAATATCTGGCTTTCATTACGGCATCTTCAGTTGCGAGTCATGTAAAGGCTTCTTTAAACGAACAGTACAAAATCGAAAGAATTACGTTTGTTTGAGGGGTGCTGGGTGTCCTGTAACTGTAGCTACTAGGAAAAAATGCCCCGCTTGTCGTTTTGATAAGTGTTTACAATGCGGAATGAAATTAGAAgctATAAGGGAGGATCGAACAAGAGGTGGTCGTTCTACTTACCAATGCTCATATTCACTACCACCATCGTTAGCTAGTCATCCTGAACTAAGGGCAAGTTCTAGTGATTTAAGGCAGTCTATTGGTGATTCACATTTAGGAGGGTTAACAGTTAAACTTGAACCACAGGATTCTTCATTATCtcataagaaaatgagttcTAGTAGACACGGTGTCCCACCATTATTGCAAgaaatAATGGATGTGGAGCATTTATGGCATTACAGTGAATTagaacttaataaattaaacacagAAGGAAACCTTGGAAATGAAGGTAGCAGTGGTGCCGtccataatatttcaaatcatCCTTTATTAGCGGGTACTGGTCTTGCTGGTTCTGCTGATACTAATCCTGATTTTGTAGCTAATTTGTGCAATATCGCTGATCATCGACTGTACAAAATTGTGAAATGGTGTAAAAGTTTGCCGCTCTTCAAAAATATCTCTattGATGATCAGATTTGTTTACTTATTAATTCATGGTGtgaacttttattattttcatgttgTTTTCGTTCAATGTCTACACCTGGAGAAATTCGTGTTTCTTTAGGGAAAAGCATAACATTAGCACAAGCTCGTGATCTCGGCATGCAAGCTTGCATCGAAAGAATGCTCAATTTTACTGAACAGTTGAGGAGACTTAGGGTTGATAGATATGAATATGTTGCCATGAAAGTTATAGTACTACTTACGTCAGataCATCAGAGTTAAGGGAAGCCGAGAAAGTAAGATTATCACAGGAAAAAGCACTAAAAGCTTTACAAGATTATACTTTGACACATTATCCTGATAGTCCAGCAAAGTTTGGTGAATTATTACTTAGAATTCCGGAACTACAACGAACTTGCCAAGTCGGAAAAGAAATGTTAACAATCAAATCAAAAGATGGTGAGGGCCCTAGTTTCAACTTACTAATGGAGCTACTTCGAGGGGACCACTAA
Protein Sequence: MATDMRSPNVSVTPINVEPYPPAALVNGDHHHNLPNHHNGEVLDSSDAEVAQIDFQSMVNMRNKKKRPGGGDGTGDIQRPMSWEGELSDNEQDMCIDEESGTQVPENLSLQAQASNKHAQVLVQNDSKESPVMRLKQTPIGNYSLHSTPSNSPLLSQRHPLPILVPKDLIHKDMMHKALNVPPTPSPDSAIHSAYSVFSSPTQSPLTQRHVTLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHVPNIHSSPLHHNVLYRSLQEDPNSQYPPEQENLDESEDKSGFVHTSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLASHPELRASSSDLRQSIGDSHLGGLTVKLEPQDSSLSHKKMSSSRHGVPPLLQEIMDVEHLWHYSELELNKLNTEGNLGNEGSSGAVHNISNHPLLAGTGLAGSADTNPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLAQARDLGMQACIERMLNFTEQLRRLRVDRYEYVAMKVIVLLTSDTSELREAEKVRLSQEKALKALQDYTLTHYPDSPAKFGELLLRIPELQRTCQVGKEMLTIKSKDGEGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01186248;
90% Identity: iTF_00369589;
80% Identity: iTF_00369589;