Cven011074.1
Basic Information
- Insect
- Coproporus ventriculus
- Gene Symbol
- TFIP11
- Assembly
- GCA_027574865.2
- Location
- JAODAH020026635.1:4974-9000[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-93 3.3e-89 299.5 12.6 1 275 391 660 391 660 0.98 2 2 0.21 1.6e+03 -1.2 0.1 243 271 673 701 664 706 0.72
Sequence Information
- Coding Sequence
- atgtcagatgatgagaaagaaaaatttgaaatcacaGATTATGACATTGAGAACGAATTTAATCCTTTCAGGAGGAGAAAAGGCAATTCCAAACATCAACAAATTTATGgtATTTGGGCAGATAACAGCGataatgaagaagaagatgtcaaatacaaaaacaaaccTTCGAAAACTTACAGAGGACCAATTGATTTTGTGGCCGGAGGGGTTCAACAAGCAGGAAAAAAGTCCAAAGAAAACAAACTGGAAGATAATTCAAATGAATCAGACGTTGAGGAGCCAACtacatcttttaaaatgaaaagagatTCTAGTGATTcagaagaagatttaaatcGACATGTGGGCTTTGGTGCTGCAAGACAAACCGAATCATTTGTAACGGAAATTACTGGAGATATTGCGGGACTgcgaaataaaaagaattttgctaATACAAACTTGATTAATAAAGGTGTAGGAAGTTGGGAGAAACATACCAAAGGCATCGGTGCAAAGCTACTGTTGCAGATGGGTTTTCAACCAGGTAAAGGGTTGGGTAAAGATTTGCAGGGAATATCTGCTCCAGTTGAAGCACACTTGCGTAAAGGTCGTGGTGCAATTGGAGCTTATGGCCCAGAGAAACCTGCTAGTATTCCTAAAATAAAGgAAGCAATAGAACatgaagaagataaaaaggaatctaaatggaaaaaagccgaagtaaaaaagaaaacaagataTTATTATAGAAGCGTTGATGATGTTATTGAGAAAGGAAAGAAGAGTATACCATTTAGAAACTCTGCTTTTAATAGtgagTTGTCAAAAGTAAAGGTAATTGATATGACGGGACCTCAGCAAAGAGTATTGAGCGGATATCATGCTCTTAGTGGATTGAAAGCACCACCAGGAGTTGAACACTATGAAGATGTATTACACAAAAAATGTTCTAATTTTACTTTACCTGAAATTCAGCACAATTTAGATGTTTTGGTAGACCTATGTGAACAGaatattataaaaattgatcgTAATACCAGATACAATCAGGACAGAATTGTTTCGTTGGAACAAGaagaaatacatttaaaaaatgtgttggtacgagaagaaaatgaagttaaaaaaatcaatgcagTTCTTGAAATAGTGAATACATTGGTTGATCCAAGTTTGGGTTTATCTTTGGGGCAAGTTgcagatatttttaaagaattacaGaaggAACATTTTGAGGAATATTGTCAATATGAATTAAGTGAATTAGCACCGGGTCTCGTTGGTCCTTTATTAACATCTGCTTTAGCAAATTGGTCCCCATTATCACAACCGAAATTGTACACGGATGTATTTTTACAATGGAAGGAATTACTTAGCAATCATCGTGGGACAATTGAAGGTAATAATATGGGAATTCTGCCATATGATAGTCTCTTATGGCACACTTGGGTGCCAGTAATGAGAACTTGTGTGAGTGCATGGCCACCTCGAGACTCGGATTCTCTAATAAATGTGCTAGAAACCTGGATTCCGCTGTTACCTCCTTGGATTCTGACTAATATTTTGGAGCAATTAGTAATTCCTAGATTAGTAGCAGAAGTTACTAATTGGGATCCTTTAACAGATACAATTCCTATTCACACTTGGATTCATCCGTGGATTCCGCTTCTTGATGCTAAATTGCAATCTACTGTATATCCGATAATTCAAGAAAAGTTGGGTGCTGCTTTGGAAAATTGGCATCCATCTGATAGATCTGCAAAATTAATGCTCAAACCTTGGCAACGAGCTTTACCTGAAGGAGcgtttattgcatttttagtTAAACATATAGTTCCAAAACTACAGCTTTGCATGCAAAGTTTGCCTATTAATCCTCATCAACAACATTTAGgtgCTTGGGAATGGGTTATGTATTGGTCCGACATGTTATCAATTGGAAATATGACTTTAATTTTggataaattcttttttccaCGTTGGCTTCAAACCCTTGCAATGTGGTTAAATCACAACCCTGATTATTCTCAAGTAACTGAATGGTATTCAGGATGGAAACGTATGATATCTGATGAATTGTTAGCACAACCTTCAATTAAAGaaaactTTCATAAAGCTTTGGAGATGATGAATCGTGCTGTAAGTAGTGGTCATCAACCAGGAGCAAAGGAATCTGTATCATACCTAACAAATATAGAATCCAACCAAGTTCCTCCACCTCCACCTAGAATTGAAacaaTATCTGAAGCTGTACGAGCTGCTTCTAAAATACCTCAAGGATTTAAGGATCTAATTGCGAAGCGCTGTGAAGAAAGGGGAATTCTTTTTGTACCCATTCCAAATAAGTACCATGAAGCTAAACAAGTTTATAGATTAGGTTCTAATAATGTTCAGTGTTATATAGACAGAAATGTtgtattttttagtaaaaataattctaattttcacCCAATATCGTTgacaaaattattagatatggcttaa
- Protein Sequence
- MSDDEKEKFEITDYDIENEFNPFRRRKGNSKHQQIYGIWADNSDNEEEDVKYKNKPSKTYRGPIDFVAGGVQQAGKKSKENKLEDNSNESDVEEPTTSFKMKRDSSDSEEDLNRHVGFGAARQTESFVTEITGDIAGLRNKKNFANTNLINKGVGSWEKHTKGIGAKLLLQMGFQPGKGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKPASIPKIKEAIEHEEDKKESKWKKAEVKKKTRYYYRSVDDVIEKGKKSIPFRNSAFNSELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHYEDVLHKKCSNFTLPEIQHNLDVLVDLCEQNIIKIDRNTRYNQDRIVSLEQEEIHLKNVLVREENEVKKINAVLEIVNTLVDPSLGLSLGQVADIFKELQKEHFEEYCQYELSELAPGLVGPLLTSALANWSPLSQPKLYTDVFLQWKELLSNHRGTIEGNNMGILPYDSLLWHTWVPVMRTCVSAWPPRDSDSLINVLETWIPLLPPWILTNILEQLVIPRLVAEVTNWDPLTDTIPIHTWIHPWIPLLDAKLQSTVYPIIQEKLGAALENWHPSDRSAKLMLKPWQRALPEGAFIAFLVKHIVPKLQLCMQSLPINPHQQHLGAWEWVMYWSDMLSIGNMTLILDKFFFPRWLQTLAMWLNHNPDYSQVTEWYSGWKRMISDELLAQPSIKENFHKALEMMNRAVSSGHQPGAKESVSYLTNIESNQVPPPPPRIETISEAVRAASKIPQGFKDLIAKRCEERGILFVPIPNKYHEAKQVYRLGSNNVQCYIDRNVVFFSKNNSNFHPISLTKLLDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01400376;
- 90% Identity
- -
- 80% Identity
- -