Cflr007072.1
Basic Information
- Insect
- Copidosoma floridanum
- Gene Symbol
- dmd-4_1
- Assembly
- GCA_000648655.2
- Location
- NW:3048626-3051640[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-26 2.9e-22 77.7 10.8 1 47 26 72 26 72 0.99 2 2 0.99 5.7e+03 -3.3 0.3 3 8 361 366 360 368 0.74
Sequence Information
- Coding Sequence
- ATGTTGCGTGGAAAGCCGAAAAAATCGGAGGATGCCGAGGAGATCGGCAGCACCGGCGGTGGGCCCGTCAAGCAGCGACGGCCAAAGTGCGCGAGGTGCAGGAATCACGGGCTCATATCGTGGCTGAGGGGCCACAAGCGCGAGTGCCGTTACCGCGAGTGCTTTTGTCCAAAGTGCTCGCTCATCGCCGAACGACAGAGGGTCATGGCTGCCCAGGTAGCATTGAAGCGACAGCAGGCGGCCGAGGATGCGATCGCCCTGAGCATGGCGAAAGTGACGACGGGCCAGAAGCTGAGCCGCCTGCCCCCGGGCAAGATATTCGGGATGACGGTCACCGAGCCGGACACCACGAGCCCCAGGGCCAAGTTTGAGCCGACCCAAGGTGGCGGAGGTGCTGCGGGGGGTAGTGCAAGTACTGTACTCCGTGGCGATGATCGCAACCCCCAAGGAGCACCGGATGCCGCTCGGAAGGACGAGCTACGCAgtgacgaggaggaggaggaggaggacaagGGCGCGATCGAATGCCCCAAGCAATGCAAGAGCGAAGACTCACAGAGCAGCCCGGCGGTGTCCCAAGCATCCGTGGACACGCTGGCCCGGCTGTTCCCGGCGACGAAGCTGTCGGTCCTCCAGCTCGTGCTCCAGCGCTGCAACCAAGACCTGCTCAAGGCCATCGAGTACTTTGCCAGCACCGGTGGTGGCGGCTCCGAGCGTGTGTCTGCCTTTCGACCCCCCCGACGAGTGGCTGATGCCGCGGGTGACAAGACCAGTGGGACCGATTCGGTTGCTCGGCCGTTTTACACGGCTGGCTTGCATGACCCTCCCCTCGGCTGCTGTTTCGTGAACGTGATGTCGGACGCCACGCTGCCCCGAAGCCTCGAGGTTTGCGCAGCGGCTGGTTTTACCCTTCAAAACGggaaacaacaacagcagcagcagcagcagcaacagagTCCCTACGAGCGAGGCTTTTTCGACGGTGCCCAACTGCAACAGCCACCCTCGGCCCAGTTGCAGCAGCCCCAGAGGCCGATTTTTCACCTGCCCCCTTTCGTCCCGCGCGTACCCTGCGTCCAGCCAAACTGCTTGCTCTGCTACAAGTTCACCTGA
- Protein Sequence
- MLRGKPKKSEDAEEIGSTGGGPVKQRRPKCARCRNHGLISWLRGHKRECRYRECFCPKCSLIAERQRVMAAQVALKRQQAAEDAIALSMAKVTTGQKLSRLPPGKIFGMTVTEPDTTSPRAKFEPTQGGGGAAGGSASTVLRGDDRNPQGAPDAARKDELRSDEEEEEEDKGAIECPKQCKSEDSQSSPAVSQASVDTLARLFPATKLSVLQLVLQRCNQDLLKAIEYFASTGGGGSERVSAFRPPRRVADAAGDKTSGTDSVARPFYTAGLHDPPLGCCFVNVMSDATLPRSLEVCAAAGFTLQNGKQQQQQQQQQQSPYERGFFDGAQLQQPPSAQLQQPQRPIFHLPPFVPRVPCVQPNCLLCYKFT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -