Cflr001579.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Copidosoma floridanum
Gene Symbol
Baz2b
Assembly
GCA_000648655.2
Location
NW:965299-999649[-]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.9e-19 1.9e-15 55.6 0.0 5 76 631 702 628 703 0.93
2 2 2 7.8e+03 -4.0 0.0 12 23 1950 1961 1950 1965 0.84

Sequence Information

Coding Sequence
ATGGAGAAGGAGAGCACCGGGACGGGCGGCGGAGGAGGCGGGAGCAGCGGAGGTGGCGATGCGACCGTTACGCCAGGCGCCACCTCCACCCCTGACCATCTCCAGGCGGATCAGGCCAACTCCTTGCTGGATCCCACCGCACTGTTTGGTGCTTATTGGCCCCGTGGTGACTTTCCCGGCATGCCCGCGGGTTACGGCCTGGCCGGGCACCACCTGCCCTCCGCCTACGCGATCCTGGGCGGGCGCAACGGGGCAGGCTCCGGCGGACCGGGTGGAGCCTCGGGCCCAGGTAGCTTCGGCACGGCCCACGGGGCAGCCACGGCCCCCGGCTACCCGCACGCCAGCCTCGGGCCCCTAGGTGTAGCCGCAGCCGCCAGCCAAGCCGCCAGTCTTGGCATCAACTCGGCCTCGGCCGCCTGGTGGTCCATGGCCACCCACCTCGCCACCCAGGAGTACCTCGCCAGGCTACAGGGAGCCGCCGCCGCAGCCGCCCTCCCCGGCTTCCCACCCGGCGCCGAGGGCCTGCTGCCCCCCTACCCACCTGGACTGCTGGCGGGACCAGCCTCGCACGCCGCTCACTCGCACTCGCACTCACCCACGAGGTCCATCTCCAACGCTACGGGAACTACCAACTCCGTTGCCACCTCCTCGTCATCCTCGGCCCACAAATCAGCCACCACAAGCAGCAGCACCAACAGCACCaacagcaccagcagcagcagcagcagcagcagcaccaacagcatcagcatcagcagcatcaTCAGCGACCCGAGCAGCATCCTCGGTGGGGTACGACTGCCACCCGACACCGAGATCATCAAGTACACCTCGAGCATAGTCGGGCCCAAGGTGCCCGGCACGACGAATCGCGGCCGCAAAAAGACCATATCGCTCGACTCGCCCTCCGTGAGCTTGCACCAGGCGGGCGGTGGTGCCCTTCAGTCCTCCGTTCCGTCCTCGGCCGGGGCCGGTGGATTGCTTATCGAGCCGAGCAAGCACCAGGAGCGCGAGAGGGACCGAGAGCGGGAGCTGCAGTCGGGGCTGGACCGGGTCGAGTTGATCAAGCTGCCGACCCACTCGACCAACGGGGCGCTCCAGCCCGCCCCGAGTTACGGCTTGGGGAGTAGTGCCGGTGGTGCTACTAGCAACGGTCCCATCCCCGGTGCCGAGGCCTCGGTGGACGCGCCGCTCAACCTGTCGCTGAAGCCGGCCTCGAGAAACGCGGCCTCGCCCATCGCCGGTAGCCAGCCTCTCAGCCAACTCAGCAATCTCAGCCAGTCGCTGCTTGCCTCGGATCGGACCTCGAGACGCAAGCCCGGCCCAAAGCCCAGGAGGGTACCCCAGAACTCGACAGCAGCGCTCGGACCGGGGGCTGCGAGTCCCTCCCTTGCTCAGCTCTTCGCGGCGGCCGACTCGCCTCAGCGCCCGAGCAGCGGCAGCGAGGAAAACGAGAGCcagcacCAACACAAGGACAGGCCCCGCAATCTCGGACGGGGCGTCTCCAAGCCGAAGAAAAACACGGTAGCGTCGCTGCTCGCCCAGAGCCGGGCTCTCGGCATCAAACCTACCCCTGGCCTCGACCCTAACGTGCCGCTCTCGCACCAGGTCGCGCTGCTCAGGTCCAACATCCTCGCGGCCCAGCTGCAACAGCAGCACGCGTCGGCTCTCGGAGGTCAGCTCGGCCACGCGGTAGACGACAAGGGCCAGCAACAGCGCTCGCTCCAGGAGAAGATGAAGAACAAGCTGATGGAGGTATCGGGGGAGGAGAGCAACATGGACGTGACCAGCGAGAGCGGCAGCAATACCGACGTCCTCTCGGACAcggatgacgacaacgacggcGTGGCTGGGCCGAAGAAGCGCAAGCTCAATCAGCACTACGAGAAGGAACTGCTGCAGCTGCCGCTCGAACGTGGCTGGAAGAGGGAGACGCTCATCCGAGGCCTTGGCAGGACGGGCGTCATCAAGGGCGAAGTCACCTACTACAGTCCCTGTGGAAAGATCTTCAGAAACAGCTCCGAACTGTTGAAGTTCTTGGAGCTGCAGAACGTTTCGGACTTGAGCGCGGTCAACTTTTCTTTCTCCTCGCGGCCACTCGTTGGTGACTTTCTGCAGCCGACGATGGGCCTAGCGGAGGCCGAATTCGTGAGGCTACCCGCCCAAGAGGTAGCGAGGAGGCTTGATGATCTCAGAGCCGTCGGTGGCTTTCGGGAGTTTAAAGTTAACAGCCAGTTTGAGCGGGACAAGCTGGCGTACATGAAAAAATTGGCCAAGGAAGAAGCGCAACGAAACAAGGAGCAGGCCAGGTTGATAAAGGAGCAAGAAAAGACGGAAAGGCAAGAGGCCGTGCGGAGAGAAAGGGAGCTGCGGAATCAACAATTGCTCGAGGGTCGTAAGCGGCTCGCTTTCACGATCAAACAGAAGATGAAGATCATCCAAGAGATCGAGCGCGGCAAGAGCAAGAGCGACGTCGCCCGAGAACTTGGCTTGGCGAGCAGCACCGTGGCGACCATATGGAAAAATAGACAATCCATATGCGACAGTTGGAGATCCCGCGATATGATGCACTCGGACCTAGACGTCGAGACCGCCAAGAAGATCATAAGCCACGGGCCTTCCGCGACTGCCGTCGCCGtagccgctgctgctgctgctgctgcatcTGTCCAAACTCAGCATTCGCCTATACTCCAATCTCTGACACTAGCCTCGGCACAGCAACAAGAACAACACtatcagcagcagcaacagcaacaaaagcagcagcagcagcagccagaGCAACAGCGTCGATCTCCCTCACCGGTTcggcagcaacagcaacagacGCCCGCGTCTCTCACCACACCCATGACTCTGACGACTACCAAGCTGAGCACGACCTCGGCGAGCGAGCCGAGCGTCGTGCCCTCGGCGCATCAGCCGGATCACCTGCAGCAAGCTCAGAGCCACACTCAAACTCAGGAGCTCCTCGAGgCCCGTAAAAAGCGCCAAGAAGAAGTGGAAAAACTTCGTTTGGAAGAACAACAGCGCAAGCAACAGGAACGAGAAATGAAGAGGCAACAAGCAGTTATACTGAAAGAACAGATGTACATGCAGGAGCTGACCAAGCAGCGCGAGATGCTCTACACCGTCGAGCTGGAGCGAGAGCGCAGGCGGCAGCACATGAACCTGATCCGGGCACTGGAGAATCGGCGCAAAATGGAGGAACGTGAACGCAAGAGGCTAGAAGCCCGGGCCGAGAGGATAGCTTCGAAGGAGCGCCGGGCTGAGCAGCGCCGGCTCGAGCTCGAGCTCGTCGAGCAGATTCGCAAGCCCGTCGAGGACATGGAATTGGCCGACCAGAAGGCCCTGCCGAAGCTACGCCGGCTGCCGGGGCTCAGGCTGAGCGGCCAAGCGTTCGCCGACATCGTCATGGTATTTGAGTTCCTTCACAACTTTGGCGAGACCCTCGGCTTCGACATGGACTCGCTGCCGAGTTTGCGCAGCCTCCAAGCGGCCCTGCTCAACGACGAGGAAGCCGAGGAAGAGCTACTCTCGGTGATGACCCACCTGCTCGTCTGCGCGATCGAGGATCCCGGCATACCCCAGCCGGCGCGTCATACGACTGGACTTGGGCAGAGCTTGCGCCAGGCTGACATCACCCACGCTAACCTGAGCGAGGTCTTGCGCATCTACCTGTACGCCAATGCGACCGGCGAGGTCAAGGCTCTGACGGGGGTCTGTTTGGAGCGCGAGCGCGACAAGAGGCTCGCCGACCACCACCAGAACGCACCGACGGACAACGGGCCTCCCACGGGTAGCGGGAAAAACGCCCAGTTTTACGAGCACCTGCACAGCAACGAGACCTGGCGCATGTCCGAGCGTCTGCGGGACAAGCCCTTCCTCGCGCTCAACCCGACCCACAAGGCACAAATGCTCGCGTTCCTCTGCAACGAGCTGCTCCAGAACAAGGCGGTCACCCGCCAGATCGAGCAGAGCCTCGAGAACGTCGCCCAGCTCAAGAAGGAGCGCTTTCTCCTCGACACCAAGATACGCAAGCTACGACAGTTGCACGCGCGTAAGCAGCGCATGGAGGCCGTGGGTGTCATCGTCAACAAGTCCGCCGACGGCATCAGTTTGACTCCTCTGATGGCGGTGGGAGCCTCGGTTATGGCTGGATcggcaacgacgacgacaacaatcATAGCGATGacgaataataatagtagtacaTCTACGACGACGGTGACAGTGGGGACGCCTACGACGACGGTGGCGTCCGCCACTGACGCGTGTAGTACCATTCCCACGATTGCTACCAGTACCGTTACTACTGGTACCAGTACCACAGCTGACGCGAGTGACGCTCTGCTGGTGGAGAATAAGAAAGAGCCCGAGGTGAACGAACAGCCGACTTCCCCGACGCTACCTCCGccaccacctccaccaccaccgccgCCTCCAGCGCCAGCCCCGGCACCCGCCGGGCACGATGAGTCGCATCACGAGGACGAGGCCCATGACGAGGAGATGTCGGAGAACGAGAGCGAGGGCACCCAGCCCGAGGAGGAGGAGGACAAAAATCTGTCGGCCGATGAGCTTGGCAAGAAGCTCGACAAGTTGCTCAAGCAGTCCGAGGAGCAGCTACAGAAGCTCAACGGTTCGTCCAAGGAGCTGCGAGCACACATATTCGGCCAGGATAGGTACTGGAGACGATTTTGGGAGTTACCCTGTGCCGGTGGGGTGTTCGTCGAGGCCATGGAGAGCGCCGAGCCGGAAGTGCTCCCGCTTCAGGCTGAGCTGGACGAAAAGTACAAGAACGCGCCGCCGAAAGAAGAGCCACCAAGCGAGGCTGAACAGCAGAAACAGTGGCAAAGTAACGGGCCCAATGATATCAGCGACGCGTCTCTTAACGATGCTACGCACGATGACGACGAGGAGCGGGAGCCCGAGAAACTCGCTGCTGACGTTGCTGTTGAGCAAAACTCGACCGAACAAACAAATAGCAACGATAATAAGAACGTGCATAACAATCACTGCAACTCCGAGCTGATCAACAACTCGACTGACGAggtgaaaaaagaaacagataTCGTGGCTGACGACAACGAGGATGACGAGGTAGCCAAGGCAAACAAACTCGAGGGTTCGAACAAAGTGAAACAAGAACTTGCTGACAACGTAGACGTAAACGTTAAGACGGAGGAGCccgaaaaattggaaaattgtCCAAACGGCGATGATGGCACCCCAAAGCTCGACGGCCTTAAGATGGAAGACAAAATTTCCGAGGCAATTGCAAACGGAGACAAATTCAATTTGCCCAACGGCAAGGAATTGAACGGTAGTTTTCCTTCTGGCAATGACAATGGCGACGAGGCAAATTGGTTTTCGATTCTTCCTCGTGAAACTTGCGACACGCCCGGCTCTAGCACGAAACAGATCTTTGGTGTGGCCGAATCCACCGAATTGAAAATACCAATGTTCCCACCTGCTAGTCCGAACTACGAGAGGTGCGATAGTCCAGCCCCACTCGTTCTCACTCAAGATGAGGCTGCACAATTGGAGTATCTCAAGATTCACGGTTTGCCACCCCCGGGAGAAGCGAAACCAGTACCGTCAGATTTGAGGTACGGCTGGTGGAGAATAACGGACGTGGACACTTTCCAAGATGTCCTGGAGAATTTGCACTCGAGGGGTGTCCGCGAGAAAGAGCTTAAACGTACAACCTGGGCAGCGATGGAGTCTTTTCTCGCAGTGACTGGTAAAATCCACGTCGACCCGGGAAACCAGGCAGCCACTGATCTGTCCGACAGCGAAGATAACGCCAACGATCCCGTTTCCATCCCAGAGTCCGATGACCCGGAAGACTGGAGCCGAGAAGTCGCTCTGCGCGTCGATGCCCAGCTTCTCGAGCAGGTCGAGGCGCTCGAGGACAAGGTCGCGAATGCCAGTATGCAAGTCAAGGGCTGGAAATTGCCACCTCGAGCGGGTACCGAGGAAGCAGAGGAGCTCGAAAAACTACACGAAATGGAACAGATAAGCGCCGTGGAGCAGGCACGTCAGAGGCTACTATCCCTCGAGGCTGCCATCGAGAGGAGATACCTCAAGCCACCCCTTGGCATTTGTACCGGCGATCCGAACCTGTCCGCCCTGAAGGCAGAGCAGGCTGCAGCAGCTGCCGCCAACGCCAACGCGGGAGGCTCCAACTCATCAAACGACGGTGGATCGACGACAGGGCCCCCGGAGGAGACGACGCCACGCGGCCTGAACAATTGGCGCGAGGCAACGGCGAGAGCGCACACCTCGGCTCAGTTGGCCATGTCACTGTACATGCTCGAGGCCAGCATCGCTTGGGACAAGAGCATCATGAAGGCTGTGAGTCTTAAGTCAGCTAAAAAGTCGCAACGCGTCAGGCTGCAAAATCGGAGCGTTCGATCGCGCAAAATTATACAGCTTTTGTCTTCTATTCAGGCTTCTaaCTGCCAATTTTGTCATAGTGGCGACAATGAGGATAAATTGTTACTCTGTGATGGCTGTGATCGCGGCTACCATACTTATTGCTTCCGTCCAAAAATGGAAAACATTCCCGATGGCGATTGgTATTGCCATGAATGTATGAACAAGGCAACAGGAGAAAGAAACTGTCTTGTCTGCGGTAAACGAGTCGGCAAAAACTTGGTTCTCTGCGAGCTTTGTCCAAGGGCTTACCACACCGACTGCCATAATCCTGTTATGCCAAAGATGCCCAGAGGGAAATGGTATTGTTTGAACTGTCACAGTAAACAGCCAAAGAAGAGGAATAGCAGCCGGAGAAGTCACAAGGGAGAAAAGGGAGGAGGCACGCGAGACAGTGAAAGTTCCGATCATCCACCAGCTAGTCCGACACCGTCGACAACCTCAAATACACATGTAGAGGATGTGAGTTCGTCAGAACCGCCGACACCAACAGCTTCGCCGAGAAAAGAAGGAGGTGTCGgtaaaagtttaacaaaaaagcaACAGCGAGAACTTGCACCCTGCAAAATTCTTCTTGAACAATTAGAACAGCAAGACGAAGCGTGGCCTTTTCTCTTACCAGTTAACACCAAACAATTTCCAACTTAcaagaaaatcattaaaactcCTATGGATCTTAGTACAATCAAGAAGAAGTTGCAAGACTGTGTGTAA
Protein Sequence
MEKESTGTGGGGGGSSGGGDATVTPGATSTPDHLQADQANSLLDPTALFGAYWPRGDFPGMPAGYGLAGHHLPSAYAILGGRNGAGSGGPGGASGPGSFGTAHGAATAPGYPHASLGPLGVAAAASQAASLGINSASAAWWSMATHLATQEYLARLQGAAAAAALPGFPPGAEGLLPPYPPGLLAGPASHAAHSHSHSPTRSISNATGTTNSVATSSSSSAHKSATTSSSTNSTNSTSSSSSSSSTNSISISSIISDPSSILGGVRLPPDTEIIKYTSSIVGPKVPGTTNRGRKKTISLDSPSVSLHQAGGGALQSSVPSSAGAGGLLIEPSKHQERERDRERELQSGLDRVELIKLPTHSTNGALQPAPSYGLGSSAGGATSNGPIPGAEASVDAPLNLSLKPASRNAASPIAGSQPLSQLSNLSQSLLASDRTSRRKPGPKPRRVPQNSTAALGPGAASPSLAQLFAAADSPQRPSSGSEENESQHQHKDRPRNLGRGVSKPKKNTVASLLAQSRALGIKPTPGLDPNVPLSHQVALLRSNILAAQLQQQHASALGGQLGHAVDDKGQQQRSLQEKMKNKLMEVSGEESNMDVTSESGSNTDVLSDTDDDNDGVAGPKKRKLNQHYEKELLQLPLERGWKRETLIRGLGRTGVIKGEVTYYSPCGKIFRNSSELLKFLELQNVSDLSAVNFSFSSRPLVGDFLQPTMGLAEAEFVRLPAQEVARRLDDLRAVGGFREFKVNSQFERDKLAYMKKLAKEEAQRNKEQARLIKEQEKTERQEAVRRERELRNQQLLEGRKRLAFTIKQKMKIIQEIERGKSKSDVARELGLASSTVATIWKNRQSICDSWRSRDMMHSDLDVETAKKIISHGPSATAVAVAAAAAAAASVQTQHSPILQSLTLASAQQQEQHYQQQQQQQKQQQQQPEQQRRSPSPVRQQQQQTPASLTTPMTLTTTKLSTTSASEPSVVPSAHQPDHLQQAQSHTQTQELLEARKKRQEEVEKLRLEEQQRKQQEREMKRQQAVILKEQMYMQELTKQREMLYTVELERERRRQHMNLIRALENRRKMEERERKRLEARAERIASKERRAEQRRLELELVEQIRKPVEDMELADQKALPKLRRLPGLRLSGQAFADIVMVFEFLHNFGETLGFDMDSLPSLRSLQAALLNDEEAEEELLSVMTHLLVCAIEDPGIPQPARHTTGLGQSLRQADITHANLSEVLRIYLYANATGEVKALTGVCLERERDKRLADHHQNAPTDNGPPTGSGKNAQFYEHLHSNETWRMSERLRDKPFLALNPTHKAQMLAFLCNELLQNKAVTRQIEQSLENVAQLKKERFLLDTKIRKLRQLHARKQRMEAVGVIVNKSADGISLTPLMAVGASVMAGSATTTTTIIAMTNNNSSTSTTTVTVGTPTTTVASATDACSTIPTIATSTVTTGTSTTADASDALLVENKKEPEVNEQPTSPTLPPPPPPPPPPPPAPAPAPAGHDESHHEDEAHDEEMSENESEGTQPEEEEDKNLSADELGKKLDKLLKQSEEQLQKLNGSSKELRAHIFGQDRYWRRFWELPCAGGVFVEAMESAEPEVLPLQAELDEKYKNAPPKEEPPSEAEQQKQWQSNGPNDISDASLNDATHDDDEEREPEKLAADVAVEQNSTEQTNSNDNKNVHNNHCNSELINNSTDEVKKETDIVADDNEDDEVAKANKLEGSNKVKQELADNVDVNVKTEEPEKLENCPNGDDGTPKLDGLKMEDKISEAIANGDKFNLPNGKELNGSFPSGNDNGDEANWFSILPRETCDTPGSSTKQIFGVAESTELKIPMFPPASPNYERCDSPAPLVLTQDEAAQLEYLKIHGLPPPGEAKPVPSDLRYGWWRITDVDTFQDVLENLHSRGVREKELKRTTWAAMESFLAVTGKIHVDPGNQAATDLSDSEDNANDPVSIPESDDPEDWSREVALRVDAQLLEQVEALEDKVANASMQVKGWKLPPRAGTEEAEELEKLHEMEQISAVEQARQRLLSLEAAIERRYLKPPLGICTGDPNLSALKAEQAAAAAANANAGGSNSSNDGGSTTGPPEETTPRGLNNWREATARAHTSAQLAMSLYMLEASIAWDKSIMKAVSLKSAKKSQRVRLQNRSVRSRKIIQLLSSIQASNCQFCHSGDNEDKLLLCDGCDRGYHTYCFRPKMENIPDGDWYCHECMNKATGERNCLVCGKRVGKNLVLCELCPRAYHTDCHNPVMPKMPRGKWYCLNCHSKQPKKRNSSRRSHKGEKGGGTRDSESSDHPPASPTPSTTSNTHVEDVSSSEPPTPTASPRKEGGVGKSLTKKQQRELAPCKILLEQLEQQDEAWPFLLPVNTKQFPTYKKIIKTPMDLSTIKKKLQDCV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-