Cflr004216.1
Basic Information
- Insect
- Copidosoma floridanum
- Gene Symbol
- dl
- Assembly
- GCA_000648655.2
- Location
- NW:157045-179079[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.4e-33 1.3e-29 102.7 0.0 3 168 25 199 23 200 0.90 2 3 5.5e-18 2.1e-14 53.2 0.1 1 168 348 522 348 523 0.91 3 3 1.3 5e+03 -3.3 0.2 116 147 650 681 641 696 0.65
Sequence Information
- Coding Sequence
- ATGGCTGGAAACGAGGAAGAGAATAAATTAGCTgtaaaagaaaagacaaaactTGATGAGCCCTTTGCTATTATACACATTCAACCGCTAATATGGGGTCTGAGATTCCGGTACAATGCCAAAAAGAATGGCGAAGCCTACAGTGTTTTGAGAGGGACAAACAGCACCACGGAGTGTCCTCTGTATCCAACGATCAAGGTTTTCAATCATTTTGGTAAACAGATGTTTGTCATAGTTTCTTGCGTAACGAAAAAAGGTCCGCCCTACCTGCAGCATCCTTTCCAGATTGTCGGCAGTTCGTGCGACGACAAAGGGTATTACCACAGTATCGTGGATATTCCGGAAGACTCTCGAGCTACGGAATTGGTCCTAAAGAACATAGGCATCAAAGTCGTTAGGAAACAAGATATGGTGAAATCTCTAGAAATACGCGAGAGAGATCGAGTCGACCCGTTCAACGCGGGTTTTTCGCACAAAATAGATTTCGAGAAGATCGATGTGTCTTCCGTTCGATTAGCGATTCAAGTTTACCTTCAAAAACCCGATGGTGAGTTTGGCGTAGCTTTGAAACCAATTGTCACGGAGCCCATTTATAACGGAAgATTGGCCAGTAAGACTTTGGATATTGTATTCCTGAGTCCCGACGAAGGCTCAATGAAAGGAGGCGAACTAATCACGTTGCTTTGcaccaaaatattttatgaagacataatagttaaatttatcCACGAGGAAAGTGGATGGCAGGGATTTGGTAAATTGGTCGAACCATTTCACCACAGGAAGttTGTACTCTTTTTCGAAACTCCCTGTTACGATGGACCGCGGAGTGAGCAAGGAAAATATAGTTTCGTGGATGTGAAAATACAATTGGAACGACGATCGGATGGAAAACGGAGTGGGATGGTTCCctttaaatttatatcacaTGGAAGTGATCTAGgtgtaatgttaaaaaatgtagcaGTGCGATCATTACAAGTGGATCATGAAATACCAAACAGCAacaAAATGCCAAGAATTGTAAAAGGCAGGCCGTATTTGGAAATCGTAAGACAACCTTGTCCGATTGTAAAGTTTCCGCACGAAAAGGAGTCAAGCAAGTACGATAGCCATATTTTCGGCGAAGCAAAAGGACACGCAAAGAAATCGTACATGACAataaagtttttcaataacatatataaaatgTTTCTGAGTGTATGCTGCGTAACGGCTGATTACCCGTATAATTTCCACCCAAATTCAATTGTTACGAAGACCGAAAACCACAAATTCATACGCAACGGGTTCATACACGAGATTCCAATCGAAGCCAACCAAAAAGAGTTAGTTTTCAACGAGCCTCTGCTATTTTCGATACAGCATCTCAAAAAGAGCGATTACGAGGCCAAACAGTTGGAAATAGAAGGACTCAAAGTCAATCCATTCGGTTCTGTTCCAGAATTTTCCGAAGCCGTGAAAAGTATGGACGTGCATCGGGTTCGTCTAGGATTTTTCGGATACTACGAGAAAAATGACGAAATCATGCCACTTGACCTCGTTGTTTCCAACGTCATTACAGATGCAAGGATCGTTAAAAGACCCTGCATAAGAAGCCTGAGTCGCGGTTTTGGGCCCGTCAATGGAGGAGTGTACTTGATTTTATGTTGTGATAATATAGACCCGAACGACACTAAGGTGGAGTTTTACCACGAAAACGAAGATAAAGAAATCACCTGGAAAGTGCAAGCTAATCCCGTTTATTTTCATGAACAAGCAGCGATTATTTGCAGGACGCCTTCCTATTACGATCAAAACACTAAAAGTGTCATTGACGTCAATATTCAGCTGATAAAAGGCTCGTGCGACCTCAGAAGTATCCCATACCCATTCATGTTGTGGCCCAttcCCGTCAGAGTCATGAATCACCTGTCATCTTTGATGTCACAGAGCGCATCAATagagtATCACGATGAAGAAACAAGTAGTGATTCTGAagacgaggaaaaaaatgaagaaatggACATTGAAAGTAGTAGAGATGTTGCTGAGTccgtaaaaaaacaaacaatgaaaAGAATGAGGGAGTCTAGCACCCTAATTTCAATAAAACCCTTACCAAAAAGACCGGCAAACGtTGATTCAGGGCAAATTAAAAAGGGATACCCAGTACCTCCGCCTTTTAGGCAACTTGGAAATACTTCGGATGCAGAACTACAGAAAATAGTTAATCAATTTTCTCTGGGAACAACAGAGACCCCCCAGACATTGGCTGTAAAATGCGAAACGGACGTCAAGTTGGACACATCAAAGAATCTTCCAAATAGTAACCCAAATATGTTTTGTACGCCTCAACAAGGAGTACCACCAGAATCGTTGCAAGTCCCTTCCACATCACAGCAAAAGTGCAATACGTTTGATACCTCGTCCGTGCTAGAAAATCACCAAAATGCAATTTACAACGAATTTTGTCCGCTTCAAAATAATACAGCAAGTAACTGGGCGCAAATGAGCTCATTGGATGCAAACCCACCCGTGAGTTCCGTTGAGCAACCTGCAGGGACACCCAACGAATGTTCCATCCCAGACACCGTCAAGCGGCTTTACTCGAAGGAACAAGAACGGGAGGATCAAAATTTGAAGTTCTTGGGCGTGGATTTGGTGGACTTTTTCAAGAACTCGAAACCTTTGGCTCCGCTGAGCCCATCCAAGCTtggcaataataatattgttgaaaatCTCAGCGTTAACAACGTTTTGTCTCAAGACACATTTGGTGCTTCCTCCGATGGGTTGCAACGTGAACCACAACGTCCTGTAGAGAaatcATCGTCAACAAAATATCCCGCAAGTCCAGCAACTACAGCTCGTAAGCAGGACAACGACATTTTTTCCTGCGTAACAGGAGTAGACGACGAACTCTTCCGTATCATCGCGGACCTGCAGAACCATGATTATCCAACTTCGGATGTTCAAAAATCTCAGCAGTACACCCCTCACCCGGTGAACTCACCAATGGAGAGTAATTATTTTCCTTGCTCGACGAACATGTACCAGCAGCCAACAGCAGGTCATCAGCCAATGCCACCGAATGGTCCTCATAAGCATCCGGGGTTGATGCGAGTGAAATCTGAGCCACACGGTTACTGCAACGACCCGAACATACCGCAACTGGTATCGGCACCGTGCGCCCCCCAATGCTGTTGCAACGTCCATAATCCGATGCAAGTGCAAGTTAATTACACAAATCCAGGGCAGTTTTGTGCTCGAAATCAATGTAGCCGGCAAATGAGTAATCCGCATTATCCAGTTTCGATGTCATATAATGGCCCGTATCAGTGGAGCGGTCGCGGTGTGGATCAGCCGCAAGATAATTTTATGAATGTCGTGGCTCCTGCCGTTGACTGTCAATCTAATGGTTGTACCATGGCGCATAGGCAACCGTGTGGTTCGAATACGTACTACAAACATGGCCATCAGAATATGGCGCGTACAGAGGTTGATTCCGTGAACGCATCGTCGCCTGATTTTTGGCATCAATATGGGGGACACAGTGTGCCGCAATTGCAAATGAATAATCcagGTTGTAACCAAACCTTGGCAAATCAGTATACATCGTATCAACCACAAATGATTCCGCAACAATCAAACAGTTATCCATTGCAACAACGAATAACAAGCACTGACAGTGATAATCAGTACCCTGGACcaagaaatcaaaattttgctCACTCTGAGGCACCATTAGTTGAAGCAACTCTTCAAAAACAGTATCCACAGGTTATTGTTCAACATAATGCTCCTGTAGCCGGCAGCGTTAATTTGCTTACTGCTTCTAAAACTGAAAATCGACTGGATGGGTTTAAcaatgAGCGACTAAGTGATTAA
- Protein Sequence
- MAGNEEENKLAVKEKTKLDEPFAIIHIQPLIWGLRFRYNAKKNGEAYSVLRGTNSTTECPLYPTIKVFNHFGKQMFVIVSCVTKKGPPYLQHPFQIVGSSCDDKGYYHSIVDIPEDSRATELVLKNIGIKVVRKQDMVKSLEIRERDRVDPFNAGFSHKIDFEKIDVSSVRLAIQVYLQKPDGEFGVALKPIVTEPIYNGRLASKTLDIVFLSPDEGSMKGGELITLLCTKIFYEDIIVKFIHEESGWQGFGKLVEPFHHRKFVLFFETPCYDGPRSEQGKYSFVDVKIQLERRSDGKRSGMVPFKFISHGSDLGVMLKNVAVRSLQVDHEIPNSNKMPRIVKGRPYLEIVRQPCPIVKFPHEKESSKYDSHIFGEAKGHAKKSYMTIKFFNNIYKMFLSVCCVTADYPYNFHPNSIVTKTENHKFIRNGFIHEIPIEANQKELVFNEPLLFSIQHLKKSDYEAKQLEIEGLKVNPFGSVPEFSEAVKSMDVHRVRLGFFGYYEKNDEIMPLDLVVSNVITDARIVKRPCIRSLSRGFGPVNGGVYLILCCDNIDPNDTKVEFYHENEDKEITWKVQANPVYFHEQAAIICRTPSYYDQNTKSVIDVNIQLIKGSCDLRSIPYPFMLWPIPVRVMNHLSSLMSQSASIEYHDEETSSDSEDEEKNEEMDIESSRDVAESVKKQTMKRMRESSTLISIKPLPKRPANVDSGQIKKGYPVPPPFRQLGNTSDAELQKIVNQFSLGTTETPQTLAVKCETDVKLDTSKNLPNSNPNMFCTPQQGVPPESLQVPSTSQQKCNTFDTSSVLENHQNAIYNEFCPLQNNTASNWAQMSSLDANPPVSSVEQPAGTPNECSIPDTVKRLYSKEQEREDQNLKFLGVDLVDFFKNSKPLAPLSPSKLGNNNIVENLSVNNVLSQDTFGASSDGLQREPQRPVEKSSSTKYPASPATTARKQDNDIFSCVTGVDDELFRIIADLQNHDYPTSDVQKSQQYTPHPVNSPMESNYFPCSTNMYQQPTAGHQPMPPNGPHKHPGLMRVKSEPHGYCNDPNIPQLVSAPCAPQCCCNVHNPMQVQVNYTNPGQFCARNQCSRQMSNPHYPVSMSYNGPYQWSGRGVDQPQDNFMNVVAPAVDCQSNGCTMAHRQPCGSNTYYKHGHQNMARTEVDSVNASSPDFWHQYGGHSVPQLQMNNPGCNQTLANQYTSYQPQMIPQQSNSYPLQQRITSTDSDNQYPGPRNQNFAHSEAPLVEATLQKQYPQVIVQHNAPVAGSVNLLTASKTENRLDGFNNERLSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -