Care015135.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Copidosoma aretas
Gene Symbol
Baz2b
Assembly
GCA_030522625.1
Location
JAPYYV010016401.1:22141-38487[-]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-18 1.2e-14 54.7 0.0 5 76 550 621 547 622 0.93
2 2 2.5 2.5e+04 -3.9 0.0 12 23 1911 1922 1911 1929 0.85

Sequence Information

Coding Sequence
atgaCTCCAAGGGTTATTATTCATGAGCCGGCGATTCCTAAATTACCTTCCTCAAAGTCCTCGAAAAGCAGCCACcacaagcagcagcagcagcagcagcagcagcagcagcagcaccaccatcAACAGCAGAAccaacatcagcagcagcagaaccagcatcagcagcagcagcagcaccaacatcagcagcagcagcagcaccaccaccaccaacagtCCCACCAGCCaccgccgcagcagcagcagttgtcGAACAGCAGCGGCGGTGGCGGTAATATCAGTGGCAGTGGGTCTGGAGTGCCCGTATCGGTGACGACGACGATAGCCTCGAACCCCATCCCAGCGGCCCCGAGTCCAGCCCCGAGTCCCGCCCAGCCACCGGTCAACGTAGTCAACGATCCGAGCGGCATCCTCGGCGGGGTGCGCCTACCGCCCGACACCGAGATCATCAAGTACACGTCGAGCATAGTCGGGCCCAAGGTCCCCGGTACCACGAACCGTGGCCGCAAAAAGACCATCTCGCTCGACTCGCCCTCCGTCAGTCTGCACCAGGCCAGTTCTGGCGGTGGTGGCCTTACCTCCTCTCTGGCCTCCTCCAACCCGACCCATGCCGGGGGCAACGTTGGCCTGCTCATCGAGCCGAGCAAGCACCAGCACGGGCGCTCGAGGCCGCGGCCACCGCCCCAGCCACCGACCCCCCAAAACGAGCTGGACTACTCCATGAGGGACAGGGACAGGGAGCTGCTGCAGTCGAGCCTCGACAGGGTCGAGCTGATAAAACTGCCGAGCCACTCGACCAACGGAGCGCTCCAGCCGAACCCCAACTACGGGGGATCGCAGGCCAGCAGCGCCGGGACGGCCAGCAGCAACGGCCCGACGCCCGGTGCCGAGGCCGCGGCGGACGCGCCGCTCAACCTGTCGCTCAAGCCGGCCTCGAGGAACGCGGCCTCGCCCATCGCGGGGAGCCAGCCCCTCAGCCAGCTCAGCAACCTCAGCCAGTCTCTGCTCGCCTCCGACCGGATCTCGCGACGCAAGCCCGGCCCCAAGCCCCGACGGGTGCCCCAGAACTCGTCACCCTCGCTCGGGCCCGGCTCGGCGAGTCCCTCTCTGGCCCAGCTCTTCGCGGCGGCCGACTCGCCCCAGCGCCCGAGCAGCGGCAGCGAGGAGAACGAGAGCcatcACCAGCACCACCACAAGGACAGGCCGCGCAATCTCGGCCGGGGCGTCTCGAAGCCGAAGAAGAACACGGTCGCGTCGCTGCTCGCCCAGAGCCGAGCCCTCGGCATCAAACCGACCCCCGGCCTCGACCCCAACGTCCCGCTCTCGCACCAGGTCTCCCTCCTCAGGTCCAACATCCTCGCGGCACAgcttcagcagcagcagcagcagcagcagcagcagcagcacgccTCGGCGCTCGGGGCTCAGTTGGGCCACGGGATCGACGACAAGAGCTCTGCCCAGCAGCAGCGCTCGCTCCAGGAGAAGATGAAGAACAAGCTGATGGAGGTCTCGGGCGAGGAGAGCAACATGGACGTGACCAGCGAGAGTGGCAGCAACACCGACGTGCTCTCGGACACGGACGAGGACAACGACGGCGCGGCCGGGCCGAAGAAGCGCAAGCTCAACCAGCACTGCGAGAAGGAGCTGCTCCAGCTGGCGCTCGAGCACGGCTGGAAGAGGGAGACGCTGATCCGGGGCCTCGGCCGTACTGGGGTGATCAAGGGCGACGTCACCTACTACAGTCCCTGCGGCAAGATCTTCAGGAGCAGCGCCGAGCTCTTCAAGTTTTTGGAGCTGCAGAACGTGTCGGACTTGAGCGCGGtcaatttttccttctcctcgAAGCCGCTCGTGGGTGACTTTTTGCAGCCCACGATGGGCCTGGCGGAGGCCGAATTTGTAAGGCTGTCGGCCCAAGAGGTGGGGAGGAGGCTTGACGATCTCAGAGCCGTCGGTGGCTTTCGGGACTTCAAAATCAACAGCCAGTTTGAGCGGGATAAGCTGGCGTACATGAAAAAGTTGGCCAAGGAGGAGGCGCAGCGAAACAAGGAGCAGGCCAGGCTAATAAAGGAGCAAGAAAAGACGGAAAGACAAGAGGCCGTGCGGAGAGAGAGGGAACTGCGAAATCAACAGTTGCTCGAGGGTCGTAAGCGGCTCGCGTTCACGATCAAACAGAAGATGAAGATCATCCAAGAGATCGAGCGCGGCAAGAGCAAGAGCGACGTCGCCCGCGAGCTCGGCCTCGCTAGCAGCACGGTGGCAACTATATGGAAGAACCGCCAATCTATTACTGATTCGTGGTTGTCGAGGGACGTGATGAAGTCGGACATCGACGTCGAGACCGCCAAGAAGATCATAAGCCACGGGCCCTCGGCAGCTGCGACAGCTGTCGCCGtagccgctgctgctgctgctgctgccgccgcggcCCAAACTCAGCACTCGCCCATGCTCCAATCTCTGGCACTCGCCtcggcgcagcagcagcagcaacaatatcagcagcagcagcagcagcagcagcaacaacaaaaacaacaacaacatcaacagaaacaacaaaaacaggagcaacaacaacagcaggaGCAGCAACGCCGATCGCCCTCGCCGGATCGGCAGCAACAACAGCCGCCCGCGTCTCTCACCACTCCCATGACCCTGACGACAACCAAGCTGAGCACGACCTCGGCCAGCGAGCCGAGCGTCGTGCCCTCGGCGCACCAGCCGGATCACCTGCAGCAAGCTCAGAGCCAAACTCAGACTCAGGAGCTCCTCGAGGCCCGTAAAAAACGTCAAGAAGAAGTGGAAAAAATTCGTTTGGAAGAGCAACAGCGTAAACAACAGgaacGAGAAATGAAGAGGCAACAGGCAGTGATACTGAAAGAACAGATGTACATGCAGGAGCTGACCAAGCAGCGCGAGATGCTCTACACCGTCGAGCTGGAGCGGGAGCGCAGGCGGCAGCACATGAACCTGATCCGGGCCCTGGAGAACCGGCGCAAGATGGAAGAGCGGGAGCGCAAGCGGCTCGAAGCCCGGGCTGAACGGATAGCCTCGAAGGAGCGACGGGCGGAGCAGCGCCGGCTCGAGCTCGAGCTGGTCGAGCAGATTCGTAAGCCCGTCGAGGACATGGAACTCGCCGACCAGAAGCCCCTGCCCAAGCTGCGCCGGCTCCCTGGCCTCCGGCTCAGCGGCCAGGCGTTCGCCGACATCGTCATGGTCTTTGAGTTCCTCCACAACTTTGGCGAGACTCTCGGCTTCGACATGGACTCCCTGCCGAGCCTGCGCAGCCTCCAGGCGGCCCTGCTCAACGACGAGGAGGCCGAGGAAGAGCTGCTCTCCGTCATGACGCACCTACTCGTCTGCGCCATCGAGGACCCCGGCATACCCCAGCCGGCCCGGCACACCACGGGCCTCGGGCAGAGCTTGCGCCAGGCCGACATCACCCACGCCAATCTTAGCGAGGTGTTGCGCATCTATCTGTACGCAAACGCGACCGGGGAGGTCAAGGCTTTGACGGGAGTCTGTCTGGAGCGGGAGCGCGACAAGAGGCTCGCCGACCACCACCAGAACGCCCCGACGGACAACGGGCCGCCCACGGGTAGCGGGAAGAACGCCCAGTTCTACGAGCACCTGCACAGCAACGAGACCTGGCGCATGTCCGAGCGTCTGCGCGACAAGCCCTTCCTCGCCCTCAACCCGACCCACAAGGCCCAGATGCTCGCCTTCCTCTGCAACGAGCTACTCCAGAACAAGGCCGTCATCCGGCAGATCGAGCAGAGCCTCGAGAACGTCGCCCAGCTCAGGAAGGAGCGCTTCCTCCTCGACACCAAGGTACGCAAGCTTCGCCAGCTGCACGCGCGCAAGCAGCGCATGGAGGCCGTGGGCGTCATCGTCAACAAGTCGGCCGACGGCATCAGTCTGACCCCCCTCTCGGCGATGACGGGAGTGTCGGCGGTCGCGATTGTGGCTACTGCTTCGACGACGGTGATagcagcgacgacgacgccgacgacgacgatggcgaCGGTGACGACGATGGCGACGACAATGGCAACGACAACCGCGGCCGTTGCCTGCAGCACGAGTCCCACGACAGTCACTACCGGCACCAGTACAACGGCCGACGCGACTGACGTCCCCGTGGAGGAGAGCAAGAATGAGCCCGAGGCGACGAACGACCAGCCGCCGGCGTCCCCGACGCTGCCTCCACCGCCGCCACCACCGCCCCCGCCACCACCGACGCCAGCACCGGCACCCGCCGGGCACGACGACCCGCATCACCACCATCACGACGACGAGGCGCACGACGAGGATATGTCGGAGAACGAGAGCGAGGGCACCCAgcccgaggaggaggaggacaagAACCTGTCGGCCGAGGAGCTCGGCAAGAAGCTCGACAAGCTGTTGAAACAGTCGGAGGAGCAGCTGCAGAAGCTCAACAGCTCGTCCAAGGAGCTGCGGGCCCACATATTTGGCCAGGACCGGTACTGGAGGCGCTTCTGGGAGTTGCCCTGCGCTGGTGGGGTCTTCGTCGAGGCCATAGAGAGCGCTGAGCCGGAAGTGCTCCTCGTCCAGGCCGAGCTGGACGAAAAGTACAGGGACGAGCCgccgaaggaggaggaggaggacgaggaggaggagccgAGCGAAGTCGAGCAGCCTAAGCAGTGGCAGAGCAATGGACCCAATGAGAGCAGCGATCAGGAGAACGGGGAGATTCCCGACGTGTCCCTCAACGACGCCGCGCACGAGGACGATGAGGAGCGAGAGCCCGAAAAGCCCGCCGCTGATGCTGATGCTGAGCAAAACTCGACAGAGCTGGCCGACGGCACTGACATGGGCGCGAATAACCACTGCGACGCCGAGTTGACGAACAACTCGGTTGGCGAGGTGAAGAAGGAAGAGGATGCAACGGCTGACGACGAAGCGGATGAGGAAGTGGCCAAGTTGACCACACTCGACTTGGCGGATTCGGACAGGGTGAAGCAGGAGGCCGCCGAGTCCGAGATCGCGGACGCGGACGTGGACGTAAAGACGGAGGAGCCCGAGAAGACGGAAAACAAATGCCTCAATGGCGACGACGGAGCAGCGAAGCTCGTCGCCCTCAAGTTAGAGGACAAAATTGCTGAGGCCATAGCCAACGGGGACAAGTTCAACCACGTCAACAACCTATCCAACGGCAAAGAACTGAACGGTAGTTTTCTTCCTGACGACGGGAATTGCACCGAGACCCATTGGTTTTCGATTCTCCCCCGAGAGACTTGCGACAAGCCAGGCTCTAGTACGAAGCAGATATTTGGCGTGGCCGAGTCGACCGAGCTGAAGATACCGATATTCCCACCTCCCGCTAGTCCGAACTACGATAGGTGCGAGAGCCCGGTGCCGCTCGTTCTCACTCAAGACGAGGCCGCTCAGTTGGAGTATCTCAAGGTGCACGGTCTGCCGCCCCCGGGTGAAGCCAAACCGGTACCTGCAGATTTTAGGTACGGCTGGTGGAGGATAACTACCGTGGACACGTTTCAAGACCTCTTGGAGCACCTGCACTCGAGGGGCGTCCGCGAAAAGGAGCTAAAACGCACAACCTGGACGACGATGGAGTCCTTCCTGGCGGTGACCGGTAAAATAAACGTCGACCCGGGCAACCAGACAGCCACCGATCTGTCCGACGGCGAGGACACCGCCAACGAGCCAGCTCCGATCCCGCAGTCCGACAACCCGGAGGACTGGAGCCGGGAAGTCGCGCTGCGCGTCGATGCCCAGCTCCTCGAGCAGGTCGAGGCGCTCGAGGACAAGGTAGCCAATGCCAGCATGCAGGTCAAGGGCTGGAAACTGCCACCTCGAGCGGGTAGCGAGGAGGCCGAGGAGCTCGATAAACTCCACGAGATGGAACAGGTCAGCGCCGTCGAACAGGCGCGCCAGAGGCTACTGTCGCTCGAGGCTGCCATCGAGAGGAGGTACCTCAAGCCGCCCCTCGGCATCTGCACCGGCGACCCGAACCTGTCCGCCCTGAAGGCAGAGCAGGCCGCAGCAGCTGCCGCGAACGCCAACGCAGGGGGCTCCAATTCGTCGAACGACGGCGGCTCGACGACAGGGCCCCCGGAGGAGACTACGCCACGCGGCCTCAACAATTGGCGCGAGGCGACGGCGAGGGCTCATACCTCGGCCCAGTTGGCCATGTCGCTGTACATGCTCGAGGCTAGCATCGCCTGGGACAAGAGCATCATGAAGGCTGTGAGTCTAAAGCCATCGGCTAAAAAGTCGCAACGCGTCAGGCTGCAAAATCGGAGCGTTCGATCGCACAAAATTGCTACTCGAAATATACAGCTTTTGTCTTCTATTCAGGCTTCTAACTGCCAATTTTGTCACAGTGGCGACAATGAGGATAAATTGTTGCTCTGTGACGGCTGTGATCGCGGCTATCATACTTATTGCTTCCGTCCAAAAATGGAAAACATTCCCGATGGCGATTGgtaCTGCCACGAGTGTATGAATAAGGCAACAGGAGAAAGAAATTGTCTCGTCTGCGGTAAACGCGTCGGCAAAAACTTGGTTCTCTGCGAGCTTTGTCCAAGGGCTTACCACACTGACTGCCATAATCCTGTTATGCCAAAGATGCCTAGAGGGAAATGGTATTGTTCGAATTGTCATAGTAAACAGCCAAAGAAGAGGAATAGCAGCCGGAGAAGTCACAAGGGAGAAAAGGGAGGAGGCACGCGAGACAGTGAAAGTTCCGATCATCCACCAGCTAGTCCAACACCGTCGACAACCTCAAATACACATGTAGAGGATGTGAGTTCGTCAGAACCACCGACACCAACAGCTTCACCAAGAAAAGAAGGAGGTGTCGGtaaaagtttaacaaaaaagCAACAGCGAGAACTTGCACCCTGCAAAATTCTTCTTGAACAATTAGAACAGCAAGACGAAGCGTGGCCTTTTCTCTTACCAGTTAACACCAAACAATTTCCAACAAACACCAAACCTGTATATAAATCGCGAGACGACTTTTGCGCTGATGTTAGGCAAATGTTTATAAACTGCGAGGTCTTTAACGAAGATGATAGTCCTGTGGGCAAAGCCGGCCATGGGATGCGCAACTTTTTCGAAACCCGCTGGACTGAATTAACTGGAGCTCCGCCTCCTCCCCCGCTTCATCCACAAACACACAGCTGA
Protein Sequence
MTPRVIIHEPAIPKLPSSKSSKSSHHKQQQQQQQQQQQHHHQQQNQHQQQQNQHQQQQQHQHQQQQQHHHHQQSHQPPPQQQQLSNSSGGGGNISGSGSGVPVSVTTTIASNPIPAAPSPAPSPAQPPVNVVNDPSGILGGVRLPPDTEIIKYTSSIVGPKVPGTTNRGRKKTISLDSPSVSLHQASSGGGGLTSSLASSNPTHAGGNVGLLIEPSKHQHGRSRPRPPPQPPTPQNELDYSMRDRDRELLQSSLDRVELIKLPSHSTNGALQPNPNYGGSQASSAGTASSNGPTPGAEAAADAPLNLSLKPASRNAASPIAGSQPLSQLSNLSQSLLASDRISRRKPGPKPRRVPQNSSPSLGPGSASPSLAQLFAAADSPQRPSSGSEENESHHQHHHKDRPRNLGRGVSKPKKNTVASLLAQSRALGIKPTPGLDPNVPLSHQVSLLRSNILAAQLQQQQQQQQQQQHASALGAQLGHGIDDKSSAQQQRSLQEKMKNKLMEVSGEESNMDVTSESGSNTDVLSDTDEDNDGAAGPKKRKLNQHCEKELLQLALEHGWKRETLIRGLGRTGVIKGDVTYYSPCGKIFRSSAELFKFLELQNVSDLSAVNFSFSSKPLVGDFLQPTMGLAEAEFVRLSAQEVGRRLDDLRAVGGFRDFKINSQFERDKLAYMKKLAKEEAQRNKEQARLIKEQEKTERQEAVRRERELRNQQLLEGRKRLAFTIKQKMKIIQEIERGKSKSDVARELGLASSTVATIWKNRQSITDSWLSRDVMKSDIDVETAKKIISHGPSAAATAVAVAAAAAAAAAAAQTQHSPMLQSLALASAQQQQQQYQQQQQQQQQQQKQQQHQQKQQKQEQQQQQEQQRRSPSPDRQQQQPPASLTTPMTLTTTKLSTTSASEPSVVPSAHQPDHLQQAQSQTQTQELLEARKKRQEEVEKIRLEEQQRKQQEREMKRQQAVILKEQMYMQELTKQREMLYTVELERERRRQHMNLIRALENRRKMEERERKRLEARAERIASKERRAEQRRLELELVEQIRKPVEDMELADQKPLPKLRRLPGLRLSGQAFADIVMVFEFLHNFGETLGFDMDSLPSLRSLQAALLNDEEAEEELLSVMTHLLVCAIEDPGIPQPARHTTGLGQSLRQADITHANLSEVLRIYLYANATGEVKALTGVCLERERDKRLADHHQNAPTDNGPPTGSGKNAQFYEHLHSNETWRMSERLRDKPFLALNPTHKAQMLAFLCNELLQNKAVIRQIEQSLENVAQLRKERFLLDTKVRKLRQLHARKQRMEAVGVIVNKSADGISLTPLSAMTGVSAVAIVATASTTVIAATTTPTTTMATVTTMATTMATTTAAVACSTSPTTVTTGTSTTADATDVPVEESKNEPEATNDQPPASPTLPPPPPPPPPPPPTPAPAPAGHDDPHHHHHDDEAHDEDMSENESEGTQPEEEEDKNLSAEELGKKLDKLLKQSEEQLQKLNSSSKELRAHIFGQDRYWRRFWELPCAGGVFVEAIESAEPEVLLVQAELDEKYRDEPPKEEEEDEEEEPSEVEQPKQWQSNGPNESSDQENGEIPDVSLNDAAHEDDEEREPEKPAADADAEQNSTELADGTDMGANNHCDAELTNNSVGEVKKEEDATADDEADEEVAKLTTLDLADSDRVKQEAAESEIADADVDVKTEEPEKTENKCLNGDDGAAKLVALKLEDKIAEAIANGDKFNHVNNLSNGKELNGSFLPDDGNCTETHWFSILPRETCDKPGSSTKQIFGVAESTELKIPIFPPPASPNYDRCESPVPLVLTQDEAAQLEYLKVHGLPPPGEAKPVPADFRYGWWRITTVDTFQDLLEHLHSRGVREKELKRTTWTTMESFLAVTGKINVDPGNQTATDLSDGEDTANEPAPIPQSDNPEDWSREVALRVDAQLLEQVEALEDKVANASMQVKGWKLPPRAGSEEAEELDKLHEMEQVSAVEQARQRLLSLEAAIERRYLKPPLGICTGDPNLSALKAEQAAAAAANANAGGSNSSNDGGSTTGPPEETTPRGLNNWREATARAHTSAQLAMSLYMLEASIAWDKSIMKAVSLKPSAKKSQRVRLQNRSVRSHKIATRNIQLLSSIQASNCQFCHSGDNEDKLLLCDGCDRGYHTYCFRPKMENIPDGDWYCHECMNKATGERNCLVCGKRVGKNLVLCELCPRAYHTDCHNPVMPKMPRGKWYCSNCHSKQPKKRNSSRRSHKGEKGGGTRDSESSDHPPASPTPSTTSNTHVEDVSSSEPPTPTASPRKEGGVGKSLTKKQQRELAPCKILLEQLEQQDEAWPFLLPVNTKQFPTNTKPVYKSRDDFCADVRQMFINCEVFNEDDSPVGKAGHGMRNFFETRWTELTGAPPPPPLHPQTHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-