Care007263.1
Basic Information
- Insect
- Copidosoma aretas
- Gene Symbol
- -
- Assembly
- GCA_030522625.1
- Location
- JAPYYV010005685.1:2573-14548[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-38 5.1e-34 118.8 0.0 2 168 24 199 23 200 0.93 2 2 7.4e-22 5.7e-18 66.5 0.0 1 168 330 504 330 505 0.91
Sequence Information
- Coding Sequence
- ATGGCAGAAAGGGCGAGAGAGGACAAATCATCTGCAAGcgagagaaaaaatttctttgatccCTTTGTTGCGATAAAAATTCAACCACAGACATGGGGAGCAAGATTCagatatgatacaaaaaagaatGGTGAGCCCTCCAGCGTCATAAGGGGGAAAAACAGTACAGGAGAATACACCGTGTATCCAACGATTCAAGTTTGCAATCATTTTGGTGACAAGATGTTTGTCATCGTTTCTTGCGTGACTAAGAATGGTCCGCGCTACCAGCAGCATCCCTATCAGCTTGTTGGCGGCTCATGTGATAATAAAGGATACTACCACTGCATCGTTGATCTTAAAAAAGACTCGAACACGACAGAATTCATTCTCGACAGCGTAGGCATAAAAGTcgttaaaaaacaagatatggTGAAATCTCTAGCTATGCGCGAACAAGATCGAGTAGATCCATTCAAGGCGGGTTTTTCGCATAAGGAAGATATGGATGGCATCGACATGTCTTGCGTCCGATTGGCCATTCAAGTTTACCTTCAAAAGCCCAACGGGCAATTTGGCATATTGTTGAGACCCATTGTCACGGAGCCCATTTACGACGGAAGATTGGCTTCTAAGAACCTGGATATTATTTTCCTAAGTCCTGAGGAAGCCCCAATGAAGGGAGGTGATCAGATCACGTTGCTTTGTACCAAAATATTACACGAAGATATAATCGTTAAATTTATCCATGAATCGAGTGGATGGATTGGAATCGGTCAATTGGTCGAGCCATACCACCATAAAAAGcttGTACTCTTTTTTGAAACTCCTTGTTATGATGGGCCCGAGAGCAATGCAAGTGATTATTGTTCAGTGGAAGTGAAAATTCAATTAGAACGACGATCGGATGGCGCACTAAGTAGAATGGTCCCTTTCAGATTTATATCATATGGAAATAGTAAAAATTCCAGTAACGAAATAGCGAGGGTACCAAAAGGCAAACCGTATCTGGAAATCGCAAGACAACCTTCCCCAATTGTAAAGTTCCCGTATGAAAGCGAATCATCAAAATACGATAGCCATGTGTACGGTGAAACAAAGGGACACGCAAAGAAGTCGTTCATTACCCTTAAGttttttaacaataaatataaaatatttctgactGTATGTTGCGTAACGGTTGATCGCCCGTATACTATTCACCCGAACAAAATAGTGACAAAGTTCCAAAACCACAAATTCATACGTAACGGTTTTATGCTCGATATTCCAATCGATCCAGATCAAAAAGAGTTGGCTTTTGACGATTCTTTGCTTTTTGCAATACATCATCTTAAAAAGAACGACTATGAACTCAGGCAGTCTGAAATAAAGGGACTCAAACTGAACCCATtcaattTTGCACCAGAAATTGTAGAGAGTATGAAAAACTTCGACTTAAATCGGGTGAGGCTGGGCTTTTACGGATATTATGAGAAAAACAAGGAAATCATCTCTCTAGACCCCGTCGTTTCTAACGTGATAACAGATGCAAGAATCATCAGGAAGCCCGGCATTCGACGCCTCAGTAGCAGTATCGCGCCTGTTAATGGAGGTGCGAGCTTGATTTTGTGCTGCGACAACATAGACCCAATCGACACGAAAGTTGAGTTCTACCGGGAAAACGAGGACAAAGAAGTTACCTGGAAAGTGCAAGCGCAACTCCTTTATTTTCATGAACAGGCAGCGATCGTTTGCAGGACGCCTACCTACTGTGATCAGAGTACGAAAAAGACCGTCAACGTCATGATTCAATTGGTAAAAGGCTCGAGTGACATGAGAAGTAATCCGTACCACTTCATGTTTAGGCCCCGtaagtga
- Protein Sequence
- MAERAREDKSSASERKNFFDPFVAIKIQPQTWGARFRYDTKKNGEPSSVIRGKNSTGEYTVYPTIQVCNHFGDKMFVIVSCVTKNGPRYQQHPYQLVGGSCDNKGYYHCIVDLKKDSNTTEFILDSVGIKVVKKQDMVKSLAMREQDRVDPFKAGFSHKEDMDGIDMSCVRLAIQVYLQKPNGQFGILLRPIVTEPIYDGRLASKNLDIIFLSPEEAPMKGGDQITLLCTKILHEDIIVKFIHESSGWIGIGQLVEPYHHKKLVLFFETPCYDGPESNASDYCSVEVKIQLERRSDGALSRMVPFRFISYGNSKNSSNEIARVPKGKPYLEIARQPSPIVKFPYESESSKYDSHVYGETKGHAKKSFITLKFFNNKYKIFLTVCCVTVDRPYTIHPNKIVTKFQNHKFIRNGFMLDIPIDPDQKELAFDDSLLFAIHHLKKNDYELRQSEIKGLKLNPFNFAPEIVESMKNFDLNRVRLGFYGYYEKNKEIISLDPVVSNVITDARIIRKPGIRRLSSSIAPVNGGASLILCCDNIDPIDTKVEFYRENEDKEVTWKVQAQLLYFHEQAAIVCRTPTYCDQSTKKTVNVMIQLVKGSSDMRSNPYHFMFRPRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -