Cnas011937.1
Basic Information
- Insect
- Contarinia nasturtii
- Gene Symbol
- nfxl1
- Assembly
- GCA_009176525.2
- Location
- NW:6530118-6534070[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 2 1.4e+04 -7.9 5.6 15 19 189 193 188 193 0.81 2 15 0.056 3.9e+02 0.9 0.2 4 10 224 230 223 231 0.96 3 15 2.9e-07 0.002 17.7 13.9 1 19 238 255 238 255 0.94 4 15 3.6e-06 0.025 14.3 12.1 1 19 291 308 291 308 0.96 5 15 1.6 1.1e+04 -3.8 0.7 6 10 333 337 332 337 0.87 6 15 9.7e-09 6.7e-05 22.5 14.6 1 19 343 361 343 361 0.99 7 15 1.3 8.8e+03 -3.5 0.9 1 8 386 392 386 393 0.66 8 15 5.2e-07 0.0036 16.9 11.9 1 18 396 413 396 414 0.97 9 15 1.9e-05 0.13 12.0 13.2 1 18 448 465 448 466 0.94 10 15 1.7e-08 0.00012 21.7 15.8 1 19 475 493 475 493 0.97 11 15 0.12 8.5e+02 -0.2 4.3 10 18 540 548 538 549 0.92 12 15 0.27 1.8e+03 -1.3 6.4 3 12 562 571 561 571 0.88 13 15 4.7e-05 0.33 10.7 5.4 1 11 642 652 642 653 0.99 14 15 0.034 2.3e+02 1.6 19.5 4 18 683 697 681 698 0.92 15 15 8.9e-07 0.0062 16.2 10.0 1 16 749 763 749 769 0.85
Sequence Information
- Coding Sequence
- ATGTCAacatttaacaataaaaataaaaagaaaacaccaCAAACTGAGAATTACAATAAGTCCAATTCGACGAATGCATGGCATACCAAAGAtacaaatcaacaaacaacatcaaaagaaacaaagaatGCGACAAACAAGCAAAATGcgtccaaaaataaatttaaagagGCTCAAATGGAGCATATACAGGCGgcaaaaaaacactttcaaaaTTATGAAACCAGTTCGGATGAGGAAGATCTCGAAAGTGATGCATTGCTCGAATCAGTGTTCAAAGGCTATGACGGTGATCGAAGCCAATTAAGAAAGACACaagaatttcttgagcatGTTTTTCAATCAGGCGCAGCCACTTGTCTTATTTGTATTGCAACCGTTAAGAGAACGGATTTTATCTGGTCATGCGAaaattgttttagttttttccatttgaattgtcTGCAAAGATGGGCAAAAGACAGTATATCACAACAGAAAATGCACCAAGAGAATGATGTTGGCGGCTATTACAATAATCAAGGCGAATATATTCCAAAGCAAGTGAAAGCCATCAAATGGTGCTGTCCCAAATGCCGTGCTGATTATCCTCCAAGTGATaTACCACAAAACTACTTTTGCTTCTGTAAAAAAGAGTTGAATCCGGCAAATCATCTGTGGTTAGTACCACATTCATGCGGTGAAGTATGCGGGAAACCATTAAAATCGGCATGTTCGCACAAATGTCTAATACTTTGTCATCCAGGGCCATGTCCGCCGTGTTCACAAATTATAAGCACATCATGTGATTGCAATAAGTCTAATTTAAAAACGATACGATGTTCACAAAACTCTTGGAAATGTGGAAATAAGTGTTCAAAGATTTTGGCGTGTGGTATTCATAAATGTGATCAAGTTTGTCACAAAGAATGTGCACCATGTACAAAAAAGAGTCAACAAAAGTGTGTATGTGGTAATCGAGTACAGGAACGAGACTGCAATAGTTTGATTTGGTCATGTGAGAAAATGTGTAACAAATTGTATGCATGCGGACGACATCGTTGCAAGGTTAAATGTCATAGCGGTGATTGTGGTGAATGCCCTTCTGGTCTACTGAGATCGTGTCCATGCGGCAAAGAAaCAACTCAAGCACCATGTACATTGGATGTTGAACCTTGTGGCAATACATGCCAAAAAATCCTGAAATGTGGCAGTCACATTTGTGCAGAGCGATGCCATCGAGGTGAATGTGGCCAATGTTTGgaaattgtcgaaaaaaaatgtcgttgtGGAAACTATTCAAAAGAGTTACCTTGCAGCAAAACATTTCTGTGTGAAGCAAAATGCAAACGTATGCGAGACTGTAATAAGCATGCATGTAATCGAAAGTGTTGCGATGGTGATTGTTCACCTTGTGATAAAATATGCGGAAAGACGCTATCTTGTGGAAAACATAAATGTACATCCGTTTGTCACCATGGACAATGTTATCCATGCACTTTAACAGCGACTGTTAAATGCCgATGTGGCAATACATCGATGGATGTTCCATGTGGTCgtgaaaagaaaaccaaacCACCAAAATGTAATCTACCATGtaaaattccatcaaaatgTCATCATAATAATGTGCACAACTGCCATATGAATGAGTGCCCGTCATGCAATAACATTTGTATGTTAACAAATGATGTGACCAATTGTGAACATCCATGCCgAGCCAAATGTCATGATGCTGTTAAAGTGCTGGTTGTTGATAAGAATTTTAAGCCAGCTGGACCATGGGATATTCAACCAGAAAAATATGAGATTCGAAAATTGCCGCATCCAAAATGTGAAGTTAAAGTACCGGTTGAATGTATTGGCGGACACGAATTGGCATTATGGCCTTGTTGGAATTCGAAACCGGCATCATGCGGTCGAAATTGTGGCCGAACATTGAAATGTGGCAATCATTTGTGCGAACAAATGTGCCATATTGTTGATGATAAAACGTCAAAAATGCAAGATAAATCATGCGCCGAATGTTTGGAAGGATGCCAAGTACCGAGACCGCCGGGATGTTGTCATTCATGTGAGAAAAGATGTCATCCAAAACCATGCAATCCATGCAATGTGGTCACTAAAACGGCCTGTCACTGTGGATTGAATCAAGTTTACTATAAATGTCACGAATTCTATGGTGAAAATCAACATGACAATGAGGTTAAAGAAAATCGAGAGAAACGTCTTAGCTGCGGCAATCGATGTATTAAGAATTTTTCATGCGGACATCGTTGCACAAATGTATGCCATTCGGGCAAATGCCTGAACGAAGAATCTTGCCGGAAGAAATTAAAAGTTTATTGCGAAtgcaaaaatcgaaaagttgAAACCACTTGCGACAAACTGCGATCCGGATTTATATTGGGTTGCGACGATACTTGCAGGTCAAGACAAGAAGAGACGAAACGTGTGGCTGAACAACAAGAACGCATCAAGCGTCAACaggaagaagaaaagaatcgTATAGAACTTGAggaatttgaaaagaaattcggaaagaaaaaatataaggAGAGAAAAGCACAAATTATTGAAGATACCGATAATTCGCATCTTTACAAATGGGCAGGGCTTGTGGCTGCTGGAGCCATACTCGCcggttttatttattatttatttgctcaaTAA
- Protein Sequence
- MSTFNNKNKKKTPQTENYNKSNSTNAWHTKDTNQQTTSKETKNATNKQNASKNKFKEAQMEHIQAAKKHFQNYETSSDEEDLESDALLESVFKGYDGDRSQLRKTQEFLEHVFQSGAATCLICIATVKRTDFIWSCENCFSFFHLNCLQRWAKDSISQQKMHQENDVGGYYNNQGEYIPKQVKAIKWCCPKCRADYPPSDIPQNYFCFCKKELNPANHLWLVPHSCGEVCGKPLKSACSHKCLILCHPGPCPPCSQIISTSCDCNKSNLKTIRCSQNSWKCGNKCSKILACGIHKCDQVCHKECAPCTKKSQQKCVCGNRVQERDCNSLIWSCEKMCNKLYACGRHRCKVKCHSGDCGECPSGLLRSCPCGKETTQAPCTLDVEPCGNTCQKILKCGSHICAERCHRGECGQCLEIVEKKCRCGNYSKELPCSKTFLCEAKCKRMRDCNKHACNRKCCDGDCSPCDKICGKTLSCGKHKCTSVCHHGQCYPCTLTATVKCRCGNTSMDVPCGREKKTKPPKCNLPCKIPSKCHHNNVHNCHMNECPSCNNICMLTNDVTNCEHPCRAKCHDAVKVLVVDKNFKPAGPWDIQPEKYEIRKLPHPKCEVKVPVECIGGHELALWPCWNSKPASCGRNCGRTLKCGNHLCEQMCHIVDDKTSKMQDKSCAECLEGCQVPRPPGCCHSCEKRCHPKPCNPCNVVTKTACHCGLNQVYYKCHEFYGENQHDNEVKENREKRLSCGNRCIKNFSCGHRCTNVCHSGKCLNEESCRKKLKVYCECKNRKVETTCDKLRSGFILGCDDTCRSRQEETKRVAEQQERIKRQQEEEKNRIELEEFEKKFGKKKYKERKAQIIEDTDNSHLYKWAGLVAAGAILAGFIYYLFAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01351324;
- 90% Identity
- -
- 80% Identity
- -