Basic Information

Insect: Contarinia nasturtii
Gene Symbol: Hr39
Assembly: GCA_009176525.2
Location: NW:2504912-2512423[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 1 1.4e+04 -7.5 14.0 85 165 62 145 14 234 0.56

2 5 0.49 6.7e+03 -4.3 10.3 26 151 178 306 147 327 0.50

3 5 1 1.4e+04 -5.5 12.6 43 127 281 370 247 438 0.58

4 5 1.8e-08 0.00026 20.2 0.1 1 20 507 526 507 529 0.94

5 5 1.8e-76 2.5e-72 244.2 1.3 153 408 549 823 530 823 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	1	1.4e+04	-7.5	14.0	85	165	62	145	14	234	0.56
2	5	0.49	6.7e+03	-4.3	10.3	26	151	178	306	147	327	0.50
3	5	1	1.4e+04	-5.5	12.6	43	127	281	370	247	438	0.58
4	5	1.8e-08	0.00026	20.2	0.1	1	20	507	526	507	529	0.94
5	5	1.8e-76	2.5e-72	244.2	1.3	153	408	549	823	530	823	0.89

Sequence Information

Coding Sequence: ATGTCTACGTCTGGCGGTGGCGGTGGTTGTTCAAACGTAGCAAGTGATCTAAGCATTCGACCGAATATATCGGTTACGAATATAAATTGTCCGACTATTAATGTGAACAGTATTGATTTAAGCAATGGTGCCAATGATTTAACAACAAATGCTAGTTGTGTATCAAATAGTAGCGAtgtaaacaacaaaacaaatagttTTTGTAATAATTTAGTGGGCGATGCACCGTCATCAGTGACATCGacacatcatcaacaacaacaacaattgaataacAATCCGCATTTCTATGGGAACGGTAGCATTCGTATTGCCGTGCCAAAAATGGAAGAATCTGATGAATCTGAGACTGAATTATCACAAATTGAGAATGCAGCCGCATCGACGACAACCACATCGACGACAGCGACGTCGGCAACGACAGCGGTAACAGCTGCAGCAGTTAGTATGCGAACgagcaacaataacaagagTACGCCACGGCCAATGTCGTGGGAAGGCGAATTGTCAGAGAATGACGATCAAATGGAAACGGATGCAAATGCGACAAAATCAACgacaaacaacaatgaaatgatTATGAATAATGcaacaaatggaaattcagAAAAATCGATTATAAAACCGCGTGCCGTTACCGCATCATCTGAGCTAAATGACAATACAGAGAAAATGACTGATTTGGATGCaaccatcaaaataaaaccCGAATACAATAGTTTTGGTGTGAATGCAAATCAAGCAATTCATGCAATGGACTCAAACAAACGTTTTCCATTTGATATgtcaaatatgaaatttgaaacaaatttacAATCACAACATATTACAAATCAATTTGCGGCCACGACAACAACCACCACAACAACACCGAATGACGTAAATTCAACAGCATCGATGATAAATcgaacaaaagcaaataatatATTGCCAACAAATCCGAGCCCCGATTCAGCAATTCATTCGGTGTACACACACAGTTCACCGAGCCAATCACCATTAACATCACGGCACACACCATATACGCCATCATTAAGCCGAAACAACAGCGATGCATCATACAGCAGTTGTTATTCGTATAGTTCGGAATTTAGTCCGACACATTCGCCAATACAAGGACGACACAATATGTATGCCAGCGCCAATTTCAATGGATCTCCATTGCATCATTCAGTATTGTATAAGCCATTGATCGATGgtaatgaaaatgcaaaaacattACAACATCAACAgtcaaacgaagaaaatattcTTGAACCCGAAATCATACCATCGGCTGGCATCTCCAGACAACAACTCATTAACAGTCCCTGTCCAATTTGTGGTGATAAAATAAGTGGATTTCATTACGGGATTTTTTCATGCGAATCATGTAAAGGATTTTTCAAGCGAACCgttcaaaatcgaaagaaCTATGTTTGTTTACGTGGCGGTCCGTGTCCCATATCGATTGCAACGCGAAAGAAATGTCCGGCATGCCGGTTTGAAAAATGCCTTCAACGTGGCATGAAATTGGAAGCGATTCGTGAGGATCGGACACGTGGCGGTCGTTCTACATATCAATGCTCGTACACTTTACCCATGCTTAGTCCATCGCTTGTTGATGGCACCCTGTTGATATCAAACAATCGATCAAAAGCACCAAACCAACAAGATAATGCAACCGGTCTTAACACACAGAACCAACAAACTATTCCAACATTATTACAAGAAATAATGGACGTCGAGCATTTATGGAAGTTTAGCGATgccgaaataaataaattgaatcagAATCAATTGTCCGGAAATGAGCATGGTAGAAATGATAGTGCAGGCACATCATCGGCAACATTGGCCACAAACCCATTATTGGCGGGACTTGCTAACAGCGAAGACACTAGCCCGGATTTAATTGCAAATCTTTGCAATGTCGCTGATCATCGACTctataaaattgtgaaatggTGCAAAAGTTTGCCACTTTTTAAGAATATATCGaTCGACGatcaaatttgtttgttaatCAATTCATGGTGCGAACTGTTGTTATTCTCGTGTTGCTTTCGATCAATTTCGTCACCCGGCGAAATTCGCATCTCTCAAggcaaatcaatcaatttggaACAAGCCAAATCCAGTGGACTTCAggCTTGTATTGAACGAATGTTGAATTTGACGGACCATTTGCGGCGGCTTCGTGTTGATAAGTATGAGTATGTGGCAATGAAAGTTATCGTTCTTCTTCAATCAGACACCTCCGATTTAAGAGAACCGGAACAAGTGCGTGGATGCCAAGAAAAAGCATTGCATGCACTGCAAACATATACACTAGCTCACTATTCTGATGCACCATCAAAGTTTGGCGAGCTGCTATTGCGAATACCGGAATTGCAACGAACTTGTCAAGTCGGTAAAGAGATGttaacaatcaaatcaaaagatGGTTCggaattcaatttgttgcTGGAATTGCTGAGAGGTGAACATTGA
Protein Sequence: MSTSGGGGGCSNVASDLSIRPNISVTNINCPTINVNSIDLSNGANDLTTNASCVSNSSDVNNKTNSFCNNLVGDAPSSVTSTHHQQQQQLNNNPHFYGNGSIRIAVPKMEESDESETELSQIENAAASTTTTSTTATSATTAVTAAAVSMRTSNNNKSTPRPMSWEGELSENDDQMETDANATKSTTNNNEMIMNNATNGNSEKSIIKPRAVTASSELNDNTEKMTDLDATIKIKPEYNSFGVNANQAIHAMDSNKRFPFDMSNMKFETNLQSQHITNQFAATTTTTTTTPNDVNSTASMINRTKANNILPTNPSPDSAIHSVYTHSSPSQSPLTSRHTPYTPSLSRNNSDASYSSCYSYSSEFSPTHSPIQGRHNMYASANFNGSPLHHSVLYKPLIDGNENAKTLQHQQSNEENILEPEIIPSAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGGPCPISIATRKKCPACRFEKCLQRGMKLEAIREDRTRGGRSTYQCSYTLPMLSPSLVDGTLLISNNRSKAPNQQDNATGLNTQNQQTIPTLLQEIMDVEHLWKFSDAEINKLNQNQLSGNEHGRNDSAGTSSATLATNPLLAGLANSEDTSPDLIANLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSISSPGEIRISQGKSINLEQAKSSGLQACIERMLNLTDHLRRLRVDKYEYVAMKVIVLLQSDTSDLREPEQVRGCQEKALHALQTYTLAHYSDAPSKFGELLLRIPELQRTCQVGKEMLTIKSKDGSEFNLLLELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01288172;
90% Identity: iTF_00367242;
80% Identity: iTF_00367242;