Cnas011215.1
Basic Information
- Insect
- Contarinia nasturtii
- Gene Symbol
- Trerf1
- Assembly
- GCA_009176525.2
- Location
- NW:1076828-1104440[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.046 45 3.9 0.0 7 43 1194 1229 1193 1230 0.93 2 2 4.7e-12 4.7e-09 35.9 0.0 2 46 1226 1270 1225 1270 0.96
Sequence Information
- Coding Sequence
- ATGGCTGCTGTAAATTCGGTTCAAGGAGGTTTGCGACTTCCTTTGGCCGGTATCGCATCACCAAGACTGTTGATGTGTAGCGCATCAATGGGTGCAGAAGGTTCGGTAACACTTCAGTTACGTGAGGCAGTTGAGGCTCCCGATTCAAGTGGACAGTCTGATACGACCGCATTGACGATTGGCTATCCAGAGACAGATCTTTTGGCTGACATACAAGGATCAATACAGGCTACAGTCGGTAGTGTAGTCAGTAAAAACTCGGTGCAAAGCAATGGCACCGTTACCGTTACAACTGTGCCAGTCACAACGACCAACGGCAACAGCAACATCAATGTGAATCGCAACCAATCATCGAATACAAACGTTAAGGAAAATGTGGTAACCACCgctcaaaataaaacaacaacaatcgcaTCATCAGCAGTAGCGGTGACAGTGGCAACGGTAAAAAAGTCCAGGCCGAAAACATCATCACCAACACGACACGGACCTCAACAATGCCAAGTATGCAGCAAAGTGTTCGGTAATGCGTCTGCTTTGGCAAAACATAAGCTTACTCATAGCGATGAACGAAAGTATGTGTGTGGCATGTGTTCAAAAGCATTTAAACGACAAGACCATTTaaaTGGTCATATGCTGACTCATCGTAATAAAAAGCCGTACGAATGTAAGGCAGAAGGTTGTGGTAAATCCTATTGCGATGCACGATCGTTAAGACGACACACTGAAAATCATCACAATACGGTGGCAACGGCTCCAACTACGccaaatcaatcgatttcatCAACAGGACCTCTGGGTGGCTTGAGTTTGTCGCCAGCAACCGCAAGCGGTGATGCAAGCTCTCCGCATGGTTCtaattgtttgcaatttaatGGTAATGGAGTAGGAGGAGATGGATCGAAATCACCGAGCTTACCAGCTGCTACTAGTAATGAAGGGCTGTCACGTCAACAGCTTGAGCTCATTAGTCAGATTatgcaacaaacaaaaccaaacgTGAGTCTCACTTCAGCCAACCAacaaaatggtcaaaaatcCATTCCGCGCCCAAGAACCTGGAACattcagACTCAACTGCAACAAACCCAAACGAAATCTGAAGTTGAAACGATAAACACAACATCAAACGCAACTACAACACTACAATCAACGGCCAATGGGAATACGGTGAAGACGGAACAAAAACCCGTTGAATGCAATTTATGCCATCGAAAGTTTAAAAATATACCAGCTCTTAATGGTCATATGCGTTTGCATGGTGGATATTTCAAGAAAGATGCCGAAgcgaaaaaatgtgataaaaaagaGACACCTGGGCCACCGTTGCAAACAGCAAGCGTTGGCATTCGGGCTCTCATCGAGGAAAAAATCATAAGCAAGCGAGGAAAAGACATACTCAAAaatTCATTTGCAGTACCTGCACCGCCAACATTATCACGTCGTTTAATCGATGCGGATAATTTTGTGGCACCAAAAACATTGACTACAACGAACGTTGTGACGCCGAGCCAAATATCAAATGCCATCACGTCGATTCCAGTGTGCCAAACAACAACCATGACAAATGTGACCCCAACGACAATTGCCAAGAATATTCAGTTGAGCacgaatttaaataaacagaATTCTATTGAAACAAAAGATGCAACACTCATTGAATTACTAAAACGCGGTACAAAAGTGGCGGTCAAATGTAATTCAAATGATACGAATGGTAGTACGCtgacatttaaatcaaatgcaacacaacagacaacaacaacaggagcagcaacaacaacggtTCTATTGCCAACAAATGTGACCGTATCCAGTCCGGTTACGCCAACTACAAGTCCATTGGGCATATCATTGTCAAATAATTCCGTGAAAAACACTCCACTTGCACTAACCATttcacaaaatgcaaatggaTCAAGCGACGTGTACACGTTAGCCTATTCAACTGATGCGACATCGACAttcttcaatgaaaatgatgtgtaTAATGTACCAGATACAGCGATGCTTTTGCAAGCAGTCGATTCCATTCAACTCTTACAAAATTCCAGTGGTTCGTCGCAGCTTGGTGACATTTCAACTATTGGCGAATATGCATTGGCCGATGGCGGTGATCTGAACGATACAAATATTCTATCACAATATACACCATCGCGACAAATTCAGGCTGTGCTAAATTCACCGTTACCGGAAAGTTTGGCCGAATTTAGCACACTTCATTCCAAAGATTTTGTGCTCTATGGCACCgaaagtgaaaatgatgattcaCCAACGGCACACACATCGAATTCATCGTTGCCCACATCACCGCTATCTTATCCAACACCGCCAGCCAGCCATGAAGGAATTACACAATCGTCACCGTTCCTTGATGATACTCATCATTTTGGCGATGCCAATTCTATATTTGAtgataagaaaaatattagcTTCCTCGATGAAAATGGATTATTCAAAGACATTAAAGACACACGACTCAGCGATTGtgagcaaattttaaaattaaaacatgaGCTTTTCAACGACACCAAAGTTGTGATGGACGATACATTGTATTTTAAgagtgaaattaaaaatgaatataattccAAGAGCGATTTAGCCAATGCAAATAATCACACCGAAAATATCGACGAGTTTAATCAAAACCTATCGTTTCTTGATGAATCACGAAATTTCCTTGTCGACAGCCGCAATCCATCGTCACCATTGTCGGCTGCATTTTTTACCAGCACCATGTCAAGCGCTGAAGAAGTAAAAGAAGCACTCCAAGAAGTGTTGCCTAACGAAAGTATTGCATGTGAACAGAATAACGACATTGATTTGTATTACTTACCATCGGCCGCATTTCAGTCACAAATGATGCTCAACTCTGACGATCCATTGTTATCATCATCGCCAAAGGATTTTATCATTAAACATCCCATAAATCGGTTCGAATTCGAATCGGGATCCAGtgcaaaaaagcaaaaacttGATGGTGGCGGTTGTGTtaatatagaaaaaagtaaaatactCATTACAAATCAAACGGAAAAAATGCACACCGAGACCTTTTTGAGCCCGTCCAATTTACCGATAAATGCACCAACAACCGTTGCAAATTCAACCACTAACAGCACTACAACTGAATTCACACAGCCCGCACATCAAgttaaagaaaatattcaatgctATGCAAAGAGTTCACAGATGAATGTTCGACGAAATATCGCatataaatcgattttacGAAAAGCATCGGCTCCATACTATACACCATCACCCATTCTTGATCCAAAACGAATTGCGCCCGGTTTGTATGCAGAAGTATCGAAGGATACATCCGAAGAtatgattgattttgaatttgccGAAAGTGCATGTGTTCCGGAGTTTACCAGAAAGTTTAAAGTAAACATTGGTTCGGATTTTCAAGCCATAATTCCATCAACGGAAACAGCAAAATCAGCTTATGAAAACGACAAATCGGAGAGAGAGCTGCCGTTGTGGAAGCCAAATGTGTTACAAAACGAAAAGCAAATTCAGCGTTTCGTTGAATTGGCCAAATCGAGTGCAGTTCCATTAGCGTGTCATTCGGAAGAGATGGCATTAAAAGCGTTGCTCAATGCAAACGGTGATATTccaaatgcaattttgaaaatgttacatGAACCACCATCGTCTATTCATAATCGTTGGCAACCGCAAGAAGTTGAAACTTTTCTTAATGGCCTTGAAACGCACGGAAAGAACTTTTACAAAATTTCCAAAGAGATTCCATCGAAAACGACTGGCGACTGTGTACAATTTTACTACTTTTGGAAAAAGCTTTGCGTTCATTATAAAAGCACTCACTTGAGTTCCGAACTATTCAATTCGGCGGATGGAAATTCGATAAATGCCACAAATCAACAAGAAGCTCGTCCGCATGTTTGTGAAATGCCAGATTGTTCAGCAaGCTTCACATCGAAAGCAGCGCTGCACGGTCACACACGAATTCATTGCATTGGACGGGGAAACACATTTCCATCTAGCACGGTCAACGGACAAAGTTTGTCAGGTACTTCAATTGCTTTAATCACACAGGAAGATATACCCTGCAAAGTGTTTCCCTGTAAGGTTTGCGGAAAgGTATTTAATAAAGTAAAGAGCCGTAGCGCACACATGAAATCACATCGAGCACAAGAGATGGAAGCGAGCACCAATTGA
- Protein Sequence
- MAAVNSVQGGLRLPLAGIASPRLLMCSASMGAEGSVTLQLREAVEAPDSSGQSDTTALTIGYPETDLLADIQGSIQATVGSVVSKNSVQSNGTVTVTTVPVTTTNGNSNINVNRNQSSNTNVKENVVTTAQNKTTTIASSAVAVTVATVKKSRPKTSSPTRHGPQQCQVCSKVFGNASALAKHKLTHSDERKYVCGMCSKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHNTVATAPTTPNQSISSTGPLGGLSLSPATASGDASSPHGSNCLQFNGNGVGGDGSKSPSLPAATSNEGLSRQQLELISQIMQQTKPNVSLTSANQQNGQKSIPRPRTWNIQTQLQQTQTKSEVETINTTSNATTTLQSTANGNTVKTEQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAEAKKCDKKETPGPPLQTASVGIRALIEEKIISKRGKDILKNSFAVPAPPTLSRRLIDADNFVAPKTLTTTNVVTPSQISNAITSIPVCQTTTMTNVTPTTIAKNIQLSTNLNKQNSIETKDATLIELLKRGTKVAVKCNSNDTNGSTLTFKSNATQQTTTTGAATTTVLLPTNVTVSSPVTPTTSPLGISLSNNSVKNTPLALTISQNANGSSDVYTLAYSTDATSTFFNENDVYNVPDTAMLLQAVDSIQLLQNSSGSSQLGDISTIGEYALADGGDLNDTNILSQYTPSRQIQAVLNSPLPESLAEFSTLHSKDFVLYGTESENDDSPTAHTSNSSLPTSPLSYPTPPASHEGITQSSPFLDDTHHFGDANSIFDDKKNISFLDENGLFKDIKDTRLSDCEQILKLKHELFNDTKVVMDDTLYFKSEIKNEYNSKSDLANANNHTENIDEFNQNLSFLDESRNFLVDSRNPSSPLSAAFFTSTMSSAEEVKEALQEVLPNESIACEQNNDIDLYYLPSAAFQSQMMLNSDDPLLSSSPKDFIIKHPINRFEFESGSSAKKQKLDGGGCVNIEKSKILITNQTEKMHTETFLSPSNLPINAPTTVANSTTNSTTTEFTQPAHQVKENIQCYAKSSQMNVRRNIAYKSILRKASAPYYTPSPILDPKRIAPGLYAEVSKDTSEDMIDFEFAESACVPEFTRKFKVNIGSDFQAIIPSTETAKSAYENDKSERELPLWKPNVLQNEKQIQRFVELAKSSAVPLACHSEEMALKALLNANGDIPNAILKMLHEPPSSIHNRWQPQEVETFLNGLETHGKNFYKISKEIPSKTTGDCVQFYYFWKKLCVHYKSTHLSSELFNSADGNSINATNQQEARPHVCEMPDCSASFTSKAALHGHTRIHCIGRGNTFPSSTVNGQSLSGTSIALITQEDIPCKVFPCKVCGKVFNKVKSRSAHMKSHRAQEMEASTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01351156;
- 90% Identity
- iTF_00367600;
- 80% Identity
- iTF_00367600;