Cnas001641.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Contarinia nasturtii
Gene Symbol
dl
Assembly
GCA_009176525.2
Location
NW:149748-159608[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-71 2.9e-68 228.7 0.0 1 169 87 257 87 257 0.98
2 2 2.3 4.6e+03 -2.9 0.2 91 133 486 533 469 565 0.53

Sequence Information

Coding Sequence
ATGGATCAAAATGACATAGcCAATCAATCAGTGAGTGAGTCGGATAAATCGTTGAACATCAGTGACGTCATTAACGCAATCCGAGACACAGATCCCTGTGCAACGGGTATTTTTAATAGTGGATCCGCATCAACAGCTGAAGTTAATTCGCAGCAATCACCAAATACTCACACGAATACCGGAAGAACAACAGCAATGACAGGCAGAAGCAATCATCACAGTTCACGTGCTCCTCAAAGCCCATATCCGAATGCATATGTTAAAATAATAGAGCAACCTGCACCAAAAGCTTTACGATTTCGTTACGAATGTGAAGGTAGGTCAGCTGGTTCTATTCCGGGAGCAAACTCTACACCTGATAACAAAGCATATCCAGGAATTCAGGTAGTTAATTATCGTGGTCGTGCTGTTGTTGTCGTATCATGtgtcacaaaagaaaaaccttatcgCGCTCATCCCCACAAATTGGTGGGAAAGGATATTTGCAGTAAAGGAGTTTGCACACTTGAAATTAACAATGACAATATGACCGCTACGTTCGCAAATTTGGGGATCCAATGTGTTAAAAAGAAGGACATTGATGATTCGTTgaaagaacgagaaaaaatcCGTGTTGATCCCTTCAGAAAGGGATTTGGACATGCTTCTCAGCCATCAAGCATCGATTTGAATGCAGTTCGATTGTGTTTTCAGGTATTTCTCAAAGATCCAGAAGGTCATAACTTTAATATTCCGCTCGAACCAGTTGTCTCCGAaccaatttttgacaaaaaagcCATGTCAGACCTCGTGATTTGTAAACTAAGCAAGCCAAGTTGCACTGTGGATGGTGGAGAAGAgataattttattgtgtgaGAAGGTATCAAAGGAAGATATACAGGTGcgattttatgaagaaaatcaaGGCGTAATCcTATGGGAAGGCTTCGGTGAATTTCAACACACAAATGTCCATAAACAAgttgcaatttcatttcgaaccccgcaatataaaacaattgatATCTCACAACCTGTCAAGTGCTTCATACAATTGCGTAGACCATCCGATAGTGCGACTAGCGATTCTTTGCCGTTCGAGTATATTCCATCAGataaaagAAAACGCAAGCGTTTATCCCctggaaatttatttgacCTACCACCGCATGACGGTCgATGGATGCAACAACCACCAACAGCTTTTTTGCTGATGCCAGATGTGAAACAAGAACCAGTATCACCGAAGTATGTTGAcagcacaacaacaacaacaacaccaccaccacctcATCGTTATACACCGTCACCGAATCCATTGAATCCATCACTTTCGCCAAACATTCCGGGTGATATGATGGGCTACATTCCATCGGTATCACCtttgcaaaatgcaaacattctCAATCCACAACAATATCAGACTCAATCGAAtcacaatcaattcaatattccGAATACATCTATGGTTACAGCAACCATAAACTTTCTCACAAATAAtcaaactgaacaaaaaaatgttacaaacaTTCTgccaaataataatttagaTAATCTAAATCAATTGGACAACAGAATAAATCAATTGGACACCGCgcagaatgaaaataatgaaaatattctaGATAATGTCAGCGGAATGAATATCAGCAGTTTTCTCGATTTAGATAGTCAACagcaaataaatacaaacgaTTTGGACATGATAAGTGATTTATTGAGCTTTGGTAATGGCACCGAAACTGCAGCGAATCAAAGCAACACTCCAATGACGATCAATGCAATACAATCGAATACATTTGGTGATGAAGAGGAAAACATGACCGATAGTTTTAAGCAATTCTCACTCCAagaatga
Protein Sequence
MDQNDIANQSVSESDKSLNISDVINAIRDTDPCATGIFNSGSASTAEVNSQQSPNTHTNTGRTTAMTGRSNHHSSRAPQSPYPNAYVKIIEQPAPKALRFRYECEGRSAGSIPGANSTPDNKAYPGIQVVNYRGRAVVVVSCVTKEKPYRAHPHKLVGKDICSKGVCTLEINNDNMTATFANLGIQCVKKKDIDDSLKEREKIRVDPFRKGFGHASQPSSIDLNAVRLCFQVFLKDPEGHNFNIPLEPVVSEPIFDKKAMSDLVICKLSKPSCTVDGGEEIILLCEKVSKEDIQVRFYEENQGVILWEGFGEFQHTNVHKQVAISFRTPQYKTIDISQPVKCFIQLRRPSDSATSDSLPFEYIPSDKRKRKRLSPGNLFDLPPHDGRWMQQPPTAFLLMPDVKQEPVSPKYVDSTTTTTTPPPPHRYTPSPNPLNPSLSPNIPGDMMGYIPSVSPLQNANILNPQQYQTQSNHNQFNIPNTSMVTATINFLTNNQTEQKNVTNILPNNNLDNLNQLDNRINQLDTAQNENNENILDNVSGMNISSFLDLDSQQQINTNDLDMISDLLSFGNGTETAANQSNTPMTINAIQSNTFGDEEENMTDSFKQFSLQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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