Basic Information

Insect: Conops quadrifasciatus
Gene Symbol: -
Assembly: GCA_949752815.1
Location: OX457079.1:18060527-18068642[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00067 0.069 14.2 5.5 1 23 84 106 84 106 0.97

2 11 5.7e-06 0.0006 20.7 0.4 1 23 112 134 112 134 0.99

3 11 0.00021 0.022 15.7 4.3 1 23 140 163 140 163 0.95

4 11 0.004 0.42 11.7 4.0 1 21 169 189 169 191 0.95

5 11 2e-05 0.0021 19.0 2.9 1 23 197 219 197 219 0.99

6 11 3e-05 0.0032 18.4 1.3 1 23 225 247 225 247 0.98

7 11 0.00035 0.037 15.0 3.6 1 23 255 278 255 279 0.97

8 11 1.4e-06 0.00015 22.6 1.0 3 23 286 306 284 306 0.97

9 11 0.00039 0.041 14.9 0.6 1 23 312 334 312 334 0.98

10 11 3.7e-06 0.00038 21.3 1.6 1 23 340 363 340 363 0.96

11 11 1.5e-06 0.00015 22.5 5.8 1 23 377 399 377 399 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00067	0.069	14.2	5.5	1	23	84	106	84	106	0.97
2	11	5.7e-06	0.0006	20.7	0.4	1	23	112	134	112	134	0.99
3	11	0.00021	0.022	15.7	4.3	1	23	140	163	140	163	0.95
4	11	0.004	0.42	11.7	4.0	1	21	169	189	169	191	0.95
5	11	2e-05	0.0021	19.0	2.9	1	23	197	219	197	219	0.99
6	11	3e-05	0.0032	18.4	1.3	1	23	225	247	225	247	0.98
7	11	0.00035	0.037	15.0	3.6	1	23	255	278	255	279	0.97
8	11	1.4e-06	0.00015	22.6	1.0	3	23	286	306	284	306	0.97
9	11	0.00039	0.041	14.9	0.6	1	23	312	334	312	334	0.98
10	11	3.7e-06	0.00038	21.3	1.6	1	23	340	363	340	363	0.96
11	11	1.5e-06	0.00015	22.5	5.8	1	23	377	399	377	399	0.96

Sequence Information

Coding Sequence: ATGATTTCTGTGAGTACAGATGAAAGCAATGGTGATAAAAGTGATGAAGATATGGATTATATCCTCATATTGGATAATGTCAGCGATAAAGATATTGAGTCCAAATTACTAAATGGAGATCATTCGGAGAAGGAGATTTATGTCTTCAATGAAAATGAGACGAATGATAACCAGCAAAATGATGACTTCGCTGTTCCTTCAAATACTGTACGTCTGAAATCCGGCTCTTCGGATGCTGGCGCAATAACCCATAGCTGCAGTCATTGCGACTACACGACTAGTaaacgatatttgctatcacGGCATCTTCGGGCGCACTCTGATGATCGTCCGTACAGGTGTTCAGTATGTGAGCGTGGTTTCAAATCCAACGCTTCTTTGCTTAACCACGTAAACACACATTTAGGCAACAAACCGCATCACTGCAAAAATTGCGAAATGACTTTCACAACTTCGGGGGAACTAGTACGCCACGTGCGTTACAAGCACACCATGGAAAAGCCTCACAAATGTACTGAGTGTGACTATGCTAGCGTAGAACTTAGTAAACTGAAGCGCCACATGCGCTGTCATACAGGTGAACGTCCTTATCAATGTCCGCATTGTACTTATGCTTCGCCAGATACATTTAAGCTAAAACGCCACATGCGCACACACACGGGTGAGAAGCCATACGAGTGTGACATTTGCCACGCCCGGTTTACACAGTCCAATTCTATGAAGGCTCATCGCATGATTCACAGCGTTGGTGAAAAACCTGTTTTTCAGTGCTCGCTCTGCCCAACGACCTGTGGACGAAAAACAGATCTTCGCATTCATATTCAGAAGCTGCATCATTCAGATGAACCGATTAATTGTAAACGTTGCGGTAAAAGCTTTCCTGACCGCTACTCTTATAAGGTGCACATAAAGACTCATGAAGGCGAAAAATGCTTTAGATGTACCCTTTGCCCCTACGCTTCAATATCATTACGTCATTTGGAAAGTCATATGCTAATACACACTGATCAGAAACCTTTTACATGTGAAATTTGTACGTTATCATTTCGGCAGAAGCAATTGCTAAAACGCCATATAAATCTGTACCACAACAAACTTTACGTACCACCAAAGCCATTAGAAAAACGACATATGTGTCCACACTGTCAGCGTTCCTTCTCTCACAAGGGTAATCTCATGCGTCATATGGAGTTACATGATCCAGATTCCAatctaaaacaacaaaagcttaaattaaaattaggaCGCAAAACACGAGTGAACGATGAATGTTCCATTGAAGTGCTGGACTGCGAAAATGAAATGATGTTTCAGAAGTATTATGAAGAGGATGCAGATTATTATGAACGCACAGAAGAATTTGAAATCATTGAGACGGTAGATAATGAAGACATGGGCCAGAAAGCTGTTATACGGCAGAagttgaaaaaagaaactgaCTTATCCAAAAATTGGGTTGATGAACCCCCGTCAGACATTAAAACTATGTCTATAAAGAGGGAAGCTAATGGTAAAGAGTTCGTAGCCGTCGAAGATATTAATGGACAGCAGTATGTCGTCGTTGAAGTTATTCACTGTTCAAATGAAGAGGGAGATACGGAAGAGGAATCTCTCACTAGTGAGAACATGAACCCAAatatttcagtcattAACTCGAACACGGACGAGAACAATGACGATGCAAATTTCGAAGAGAACGATGATGATTCCGACAATAAGGAAACTATCCAGTTGCTGGAAATTATAGATGATGATTAA
Protein Sequence: MISVSTDESNGDKSDEDMDYILILDNVSDKDIESKLLNGDHSEKEIYVFNENETNDNQQNDDFAVPSNTVRLKSGSSDAGAITHSCSHCDYTTSKRYLLSRHLRAHSDDRPYRCSVCERGFKSNASLLNHVNTHLGNKPHHCKNCEMTFTTSGELVRHVRYKHTMEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHMRTHTGEKPYECDICHARFTQSNSMKAHRMIHSVGEKPVFQCSLCPTTCGRKTDLRIHIQKLHHSDEPINCKRCGKSFPDRYSYKVHIKTHEGEKCFRCTLCPYASISLRHLESHMLIHTDQKPFTCEICTLSFRQKQLLKRHINLYHNKLYVPPKPLEKRHMCPHCQRSFSHKGNLMRHMELHDPDSNLKQQKLKLKLGRKTRVNDECSIEVLDCENEMMFQKYYEEDADYYERTEEFEIIETVDNEDMGQKAVIRQKLKKETDLSKNWVDEPPSDIKTMSIKREANGKEFVAVEDINGQQYVVVEVIHCSNEEGDTEEESLTSENMNPNISVINSNTDENNDDANFEENDDDSDNKETIQLLEIIDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01201059;
90% Identity: -
80% Identity: -