Cqua021023.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Conops quadrifasciatus
Gene Symbol
-
Assembly
GCA_949752815.1
Location
OX457081.1:19569864-19575255[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 7.1 7.4e+02 1.5 6.5 1 23 267 290 267 290 0.94
2 26 0.00023 0.024 15.6 0.2 1 23 300 323 300 323 0.96
3 26 7.1e-06 0.00074 20.4 0.5 3 23 329 350 328 350 0.96
4 26 7.5 7.8e+02 1.4 0.2 2 23 359 381 358 381 0.81
5 26 0.0017 0.17 12.9 1.2 2 23 405 426 404 426 0.97
6 26 7.3e-06 0.00076 20.3 2.7 1 23 432 455 432 455 0.97
7 26 0.19 20 6.5 1.3 2 23 472 492 471 492 0.97
8 26 0.0016 0.17 13.0 4.8 1 23 507 529 507 529 0.95
9 26 0.0054 0.56 11.3 0.8 1 23 538 561 538 561 0.96
10 26 7.1e-05 0.0074 17.2 1.5 1 23 566 588 566 588 0.96
11 26 2.9e-06 0.0003 21.6 0.8 3 23 595 615 593 615 0.97
12 26 0.0074 0.77 10.9 2.2 1 23 621 643 621 643 0.98
13 26 0.047 4.9 8.3 4.0 1 23 648 670 648 670 0.95
14 26 0.038 3.9 8.7 1.1 1 23 675 699 675 699 0.97
15 26 0.18 19 6.5 4.0 1 23 762 785 762 785 0.96
16 26 0.00086 0.089 13.8 0.2 1 23 792 814 792 814 0.96
17 26 1.3e-06 0.00014 22.7 2.1 2 23 820 841 819 841 0.97
18 26 0.01 1.1 10.4 2.3 1 23 847 869 847 869 0.97
19 26 0.21 22 6.3 3.9 1 23 874 896 874 896 0.97
20 26 0.52 54 5.1 0.5 1 23 901 925 901 925 0.92
21 26 0.00077 0.08 14.0 6.5 1 23 979 1002 979 1002 0.95
22 26 5e-05 0.0052 17.7 0.6 1 23 1008 1030 1008 1030 0.97
23 26 5.7e-06 0.00059 20.7 1.0 2 23 1036 1057 1035 1057 0.97
24 26 0.01 1 10.5 2.5 1 23 1063 1085 1063 1085 0.98
25 26 0.013 1.4 10.1 2.6 1 23 1090 1112 1090 1112 0.96
26 26 0.055 5.7 8.1 0.3 1 23 1117 1141 1117 1141 0.96

Sequence Information

Coding Sequence
ATGGAAACTTATGACTTTGCTGTGGAATGCCGTGCTTGCCTCAGCACCAGCTCAACCGAATACATCGATATGGATTCATCGATGGCCGGGGACTATACCATTTTCGATTGCTTCAATATGTGCACCAATTTGAGAGCAGATCATGGGGATGAACTGCCTGACACCATTTGTTCCGCCTGCTCACATAGTCTGCAAATTgcgtttgattttttgcacACAGCACGACAATCCGATGCAGTTTTGCGAGAGAATTTGACGGCACACAAAATGCAACTAAATGTGAATGGAGAGCAGGAGGAAATAGAACGATTAGAATATGTGGAAAGTATCGAAGATTTAGATACAGATAATGGCACGGAAGAGCACATACTTGAGCTACAATTGGGGGAAGATGTAGAGGATGGTACAGAGAAGAAGATTGAATATGTAGATGAAAATTGCGAGAATATGGAGCAATATACACAGGAAGAAGCACTCGACCAAATGGAAGATTCAGAAATCACAGCCCAGAATTCGACTGAGGAAAAATCGGAGATTGAGCATTTAGAATTGGAAGTTGAGCAAAATGGTCCTCAAGCAATTAAACGATATGTTAAAGGGAACAACTTAAAAGTTGTTAAACAAGAGATGCCAGAATCCTATCCAGAGGATGAAGTGGACGATGAGTACCTGCTGGAACAGAGCGAAACCTTGGAGAAAGGAGAAACGCAGGGTTGGAAATGCATCGAATGCAAACGCCTGTTGCACCCTGATGTCTCCTATGAGGGGCATTTAAatatgcataaaaatgtgaaaCCTTACAAATGCACGCAATGCCGCAGTACATTTCGCTGCAGAAACGCTTTGGAACATCATGCGAGCAAACGCCACGCTCACGAGAGAGCTACGCAGAAATGTTTCACTTGTGACATGTGCGACAAGCCATTCCGTCTGGCGACATTACTTTTGGAACATAGGAGAGCCGAGCATAAGACGCTAGAGAACTGCACTCGATGCGGCAAATCCTTCAAAACTGAGGAATTGCTGGAGGAGCATATGAAGATTTTACATCCGCCCACTAATACGACTCCTGTGCAATGCCCCTATTGCACGCAGCAGCCGATGACAAAGCCGCGCTTAGTAGAACACCTTCGTCTGCAACATCCAAGCGAGCATCGGAGACATTTGCACACTGTTGGTCGACCTTGTGACGAGAACAAAGTGACACCATGGCAATGCGAAGAATGTTTCCGTTATTATCGCACCGAAACTTTGCTTAAGGACCATCGCAACACGCACACCAACGAGCGACCACACACTTGCAGCGTATGCGAGAAACGATTCTTCACGGCAAATAATTTACGTAGCCATATGCGTTCAATACATCAGGCCGAGTACGAGAAGCGACTGGCCGAGAGTCTGGATAACGTTGTACAATGTGgagtatgcaaaaaaaaactattgcaaaaaaatttcgataagCACATGCTCACCCATGAACGCAGGGAAAAGCGGGCGACGGAAGAAGCGACAGCAAAATACCTTTGCGCCTATTGCCCGCGCGAATGCAAGAGTCAAAAGACCCTCAATCACCACATGAAACTGCACCAGTCCGAAGAGTCCGGAGTTATATATGAATGTGCAGAATGCGAGCGTCAGTACGCAACGGACCAGCATTTAGAGCAACACCGTAAACAAGCACACAAGGAACGTGATCACTTTTGTCCCATCTGTGGCAATGCATTCAAGCTCAAGAACCAACTGATGAATCATATGAAGCTGCATTTGGAAAAGAACATAGCGTGTCCTCATTGCGACAAGAAGTACGCACGCCAGTTCGACCTGAATGTGCATCTCCGCAGCCACACTGGCGAGCTGCCATACGCCTGCCACTTGTGCGAGAAGCGTTTCGCCATTAAAGTACGACTTACCTACCATTTGCAAAAGCACTTGGGCATCAAACATCGTTGCAAGGAGTGCAGAGCCGAATTCAATTCGAGACAGAAGCTGAAAGCTCATTCCTACAAGCACACCGGCATGCCATACCGATGCGAGATATGTGATAACCATGGTTTTGCCAATAGGGATGTGTTCAAACGTCACCTGTTGAGAGTGCACAAATCGACGATGTCAGATGAGGATTTGGTGGAAATGTTTCAACGAAACACGGGCAAAACGACGGTTATACGACCAATTGAGAAGGTATCTATGGTGGCTGCAGCATTGCCCGGAGCCAGAGTCGCAGAAATGGAAGCCAAACTGTACAAACACGAAGAGGTGCACAACCCCGAACGGAAGCGTGACCATGCGTGTGACTACTGTGCATCGAAGTTCTACAATCAGTATGACAAAATGCATCACATCCGGCGTGTCCACGAGTCAAACGAAAGAGCCTTTATATGTGCCGTCTGCGGCAATGCGTACAAGGAAAAGTCGCAGCTGCGTAACCACTATATTCTGCATACGCAAAAGAATATTCAGTGTCACCTCTGTGATAAGAAATACGCTCGCCAGACCGACTTGCGCGTGCACATGCGCAGCCACACGGGCGAGTTGCCGTTCGCCTGCCATTTGTGCGAGAAGCGATTCGCCATCAAGGTGCGCCTCACTTACCATCTGCAAAAACATTTGGGCGTGAAGCATACGTGTAACGAATGTGGTGCCATGCACAATAGCCGCGGCAAGCTGCGCATGCACATGTTTAAGCACAGCGGTATGCCGTACCGTTGCGAAATTTGCCCAGAGGCTCAGTTTTCCAAGCGCGAACGTTTCCGTCTGCACATAACGCGTGTGCATAATCGTACTCCGAGTGAGGCAGAGTTAACTGCAAATTTTGAACGCAACACGGGCCGGGCCATACGCGTTAAGGATCTACACACGCAAGAATTTACCAAGCAGAAGAACCTTGCGATGCATGAGGAAGGTGCCCATCTGCTCAAGCAGCAGGATCCACAACATACTTGCCCACAATGTTCCAAAAAGTTCTTTCAACATAAACATCTGCAGGCACACATGGGTCGCGTGCACACACAAGTGCGCAAACACGTGTGCAACATGTGCGGCAACGCATTCAAAGGACGTTCACAGCTCTCGGCTCATATAAAGTTGCACATGGAAAAGAATCTCAGTTGCCCGCACTGTGAAAAGAAATATGCCCGCACCGCTGATCTGACTGTGCACATGCGCAGTCACACCGGCGAGTTGCCGTACGCTTGTCACCTGTGCAGTAAGCGCTTTGCCATTAAGGTGCGACTCACTTACCACCTGCAGCGGCATGACGGCGTCAAGCATCCGTGTGCACACTGCGAAGCTGTCTACGACAACCGAAATAAACTGAAGGAGCACATGTTTAAGCACACCGGCATGCCATATCGTTGTGAAGAATGTCCGGGTGTGGAGTTCTCCCGCCGAGTGCGttttatcaACCATATGTTACGCACACACGAACGTCAAATGAGCGACGAGGAACTGGCTCAAATGTTTGCCAAGAACACCGGTAAAGTAATTCGATTCAAACAGCTGGACGGTAATAATTTGGTAAACTCCGACTTTTGTGATGATTCGCAAGAAGACAAGTTTCCGCGGATACATCATATTGATGATTGCGATAATGCAGACGAAACGTAA
Protein Sequence
METYDFAVECRACLSTSSTEYIDMDSSMAGDYTIFDCFNMCTNLRADHGDELPDTICSACSHSLQIAFDFLHTARQSDAVLRENLTAHKMQLNVNGEQEEIERLEYVESIEDLDTDNGTEEHILELQLGEDVEDGTEKKIEYVDENCENMEQYTQEEALDQMEDSEITAQNSTEEKSEIEHLELEVEQNGPQAIKRYVKGNNLKVVKQEMPESYPEDEVDDEYLLEQSETLEKGETQGWKCIECKRLLHPDVSYEGHLNMHKNVKPYKCTQCRSTFRCRNALEHHASKRHAHERATQKCFTCDMCDKPFRLATLLLEHRRAEHKTLENCTRCGKSFKTEELLEEHMKILHPPTNTTPVQCPYCTQQPMTKPRLVEHLRLQHPSEHRRHLHTVGRPCDENKVTPWQCEECFRYYRTETLLKDHRNTHTNERPHTCSVCEKRFFTANNLRSHMRSIHQAEYEKRLAESLDNVVQCGVCKKKLLQKNFDKHMLTHERREKRATEEATAKYLCAYCPRECKSQKTLNHHMKLHQSEESGVIYECAECERQYATDQHLEQHRKQAHKERDHFCPICGNAFKLKNQLMNHMKLHLEKNIACPHCDKKYARQFDLNVHLRSHTGELPYACHLCEKRFAIKVRLTYHLQKHLGIKHRCKECRAEFNSRQKLKAHSYKHTGMPYRCEICDNHGFANRDVFKRHLLRVHKSTMSDEDLVEMFQRNTGKTTVIRPIEKVSMVAAALPGARVAEMEAKLYKHEEVHNPERKRDHACDYCASKFYNQYDKMHHIRRVHESNERAFICAVCGNAYKEKSQLRNHYILHTQKNIQCHLCDKKYARQTDLRVHMRSHTGELPFACHLCEKRFAIKVRLTYHLQKHLGVKHTCNECGAMHNSRGKLRMHMFKHSGMPYRCEICPEAQFSKRERFRLHITRVHNRTPSEAELTANFERNTGRAIRVKDLHTQEFTKQKNLAMHEEGAHLLKQQDPQHTCPQCSKKFFQHKHLQAHMGRVHTQVRKHVCNMCGNAFKGRSQLSAHIKLHMEKNLSCPHCEKKYARTADLTVHMRSHTGELPYACHLCSKRFAIKVRLTYHLQRHDGVKHPCAHCEAVYDNRNKLKEHMFKHTGMPYRCEECPGVEFSRRVRFINHMLRTHERQMSDEELAQMFAKNTGKVIRFKQLDGNNLVNSDFCDDSQEDKFPRIHHIDDCDNADET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01201044;
90% Identity
-
80% Identity
-