Basic Information

Insect: Conops quadrifasciatus
Gene Symbol: -
Assembly: GCA_949752815.1
Location: OX457080.1:33017959-33026159[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.6e-05 0.0027 18.6 2.1 1 23 378 400 378 400 0.97

2 18 1.1e-05 0.0011 19.8 0.4 1 23 406 428 406 428 0.97

3 18 0.00053 0.055 14.5 0.5 1 23 434 456 434 456 0.96

4 18 1.8e-05 0.0019 19.1 3.1 1 23 462 484 462 484 0.97

5 18 4.1e-05 0.0042 18.0 4.7 1 23 490 512 490 512 0.99

6 18 7.4e-05 0.0077 17.2 5.7 1 23 518 540 518 540 0.97

7 18 3.5e-07 3.6e-05 24.5 4.3 1 23 546 568 546 568 0.98

8 18 1.3e-07 1.4e-05 25.8 2.4 1 23 574 596 574 596 0.97

9 18 7.6e-05 0.0079 17.1 6.7 1 23 602 624 602 624 0.97

10 18 2.2e-05 0.0023 18.9 6.5 1 23 630 652 630 652 0.98

11 18 3.7e-06 0.00038 21.3 4.5 1 23 658 680 658 680 0.98

12 18 4.4e-05 0.0046 17.9 8.3 1 23 686 708 686 708 0.98

13 18 2.2e-06 0.00023 22.0 7.7 1 23 714 736 714 736 0.98

14 18 7.8e-07 8.1e-05 23.4 7.7 1 23 742 764 742 764 0.98

15 18 0.00024 0.025 15.6 9.5 1 23 770 793 770 793 0.95

16 18 0.0002 0.021 15.8 0.5 1 23 799 821 799 821 0.97

17 18 0.00021 0.022 15.7 4.7 1 23 831 853 831 853 0.98

18 18 1.1e-05 0.0011 19.8 1.6 1 23 859 882 859 882 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.6e-05	0.0027	18.6	2.1	1	23	378	400	378	400	0.97
2	18	1.1e-05	0.0011	19.8	0.4	1	23	406	428	406	428	0.97
3	18	0.00053	0.055	14.5	0.5	1	23	434	456	434	456	0.96
4	18	1.8e-05	0.0019	19.1	3.1	1	23	462	484	462	484	0.97
5	18	4.1e-05	0.0042	18.0	4.7	1	23	490	512	490	512	0.99
6	18	7.4e-05	0.0077	17.2	5.7	1	23	518	540	518	540	0.97
7	18	3.5e-07	3.6e-05	24.5	4.3	1	23	546	568	546	568	0.98
8	18	1.3e-07	1.4e-05	25.8	2.4	1	23	574	596	574	596	0.97
9	18	7.6e-05	0.0079	17.1	6.7	1	23	602	624	602	624	0.97
10	18	2.2e-05	0.0023	18.9	6.5	1	23	630	652	630	652	0.98
11	18	3.7e-06	0.00038	21.3	4.5	1	23	658	680	658	680	0.98
12	18	4.4e-05	0.0046	17.9	8.3	1	23	686	708	686	708	0.98
13	18	2.2e-06	0.00023	22.0	7.7	1	23	714	736	714	736	0.98
14	18	7.8e-07	8.1e-05	23.4	7.7	1	23	742	764	742	764	0.98
15	18	0.00024	0.025	15.6	9.5	1	23	770	793	770	793	0.95
16	18	0.0002	0.021	15.8	0.5	1	23	799	821	799	821	0.97
17	18	0.00021	0.022	15.7	4.7	1	23	831	853	831	853	0.98
18	18	1.1e-05	0.0011	19.8	1.6	1	23	859	882	859	882	0.96

Sequence Information

Coding Sequence: atgaatACAGAACATGCATCTGCAACTCCTGGTGAGTCCGCAACAAATCAGCAACAAAATGATTCCAATCAGCCGCAAAATCAGCATTCTCCACAGGAACAAGCTGAACATTTAAGAAATTCTCAATTAAACCAGGGGTCTGGGCAAGCGTCTTACAATATTGACGTAACTTCATCCACTGCAACAGTTCCCTCATTTATGCCCCCTTTGGCAACGCATGTGAATATAAATCAGGCAACCAATCCGTCACTTTCTAAAGCGAATCATTTGCCCTTGCCCCCATCAAGGAACGTAGTAGGAAACGATTCTTCCGGTAACAACGAGAGCAGTGTTCCTGCACTCCCAATACCACAAGCAATGCTGGCCAATGCATCAATTGCACAACAATTACCGAACGGTACAATTATAACACAGCGTCATCCCTCTGTTgagcagcatcagcaacaattACACGTTCATGCGGCGATGTCATCCACAGATGATAATAGACAGCATGttccacagcagcagcaacagcagcacgtTGCAGTGCAGCAACAACCTCACCAACAAGACAATTCCAAAGAGGAGAAGTCATATGCAGCCAACGGAAAAGTTAACCAACAAATGATTATTCAACAAGTGACAACAACTACGACTCCGACAACCTCTTCAGCAGGTGGAAGCACAATAACTCTAGGGACTTCAAAGTCTGACAATAAAGACCAACAACAAGATCAGCAGTTGGGCAAACCGCCCCCCGGCATTGAAATGTACAAAGTTAATATTGAAGACATTTCACAATTATTCACTTACCATGAAGTTTTTGGGAAAATCCATGGTGAAGTAATGAATCATCAAATGTCCACGCACTCTGTGGCAAATCCCAACGGAGCTAGCGTTACAACGTCCAGCAATTCTATGGCTACTATTTCAACAACTAACACCACAACGGGATCTGGAATCACTCCACCTTCGACGACGTCGAATCTAACGACAACAATCGCTAGTGGAACGACAACTGTTACAACTACAGGCACCGCAGGCGCATCTGGTGAACTGCTTATGCCTAAAATGGAAGGCGGGATCGGTGTCGATCAGGCCACAACGCTGACCTTGGCACCTGATGGCACCCCAATCGCCACAGGGAATCACGTCTGCGACATATGCggaaaaatgtttcaatttcgCTACCAACTGATTGTACATCGCCGCTACCACAGCGAAAGGAAGCCCTTCAATTGTCAGGTGTGCGGCCAGGGCTTTACGACATCTCAAGATTTGACGCGTCACGGCAAGATCCATATCGGAGGACCAATGTTCACATGCATTATATGTTTCAATGTCTTTGCTAATAACGCAAGTCTTGAGCGCCACATGAAACGACATTCGACTGACAAACCATTCGCGTGCACCATTTGCCAAAAGACTTTTGCACGGAAGGAGCATTTGGATAATCACTTTAGGTCACATACCGGTGAAACCCCTTTCCGTTGTCAGTATTGTGCAAAGACTTTTACTCGCAAGGAGCATATGGTTAATCATGTTCGCAAGCACACCGGAGAGACCCCACATCGTTGCGACATTTGCAAGAAGTCATTCACACGCAAGGAGCACTACGTCAACCACTATATGTGGCATACTGgacAAACGCCCCATCAGTGCGAAGTTTGTGGTAAGAAGTATACAAGGAAGGAACATCTGGCTAACCATATGCGGTCTCACACTAATGACACACCTTTCCGTTGTGAGATCTGCGGTAAGAGTTTTAGCCGAAAAGAACACTTCACCAATCACATTCTGTGGCATACAGGGGAGACCCCTCACCGCTGTGACTTCTGCTCAAAAACCTTCACGCGTAAGGAACACTTACTGAATCATGTTCGACAACATACTGGAGAGTCGCCACATCGGTGTACATATTGCTTAAAGACCTTCACACGAAAGGAACACCTCGTAAATCATATACGTCAACATACTGGTGAGACACCCTTCAAATGTACCTACTGTACCAAAGCGTTCACTCGCAAAGATCACATGGTTAACCACATACGTCAACATACAGGCGAGTCACCACACAAGTGCACTTTTTGCACTAAAACCTTCACCCGTAAGGAACACCTAACAAACCACGTGCGGCAGCATACCGGCGAATCGCCGCATCGTTGCAGCTACTGCAAGAAAACCTTTACGCGAAAGGAGCATCTAACCAACCACATTCGCCTGCATACTGGCGACTCCCCTCACAAATGCGAATATTGTCAAAAGACATTCACACGCAAGGAGCATCTCAACAATCACATGCGTCAACACTCAAGTGACAACCCACATTGCTGCAACGTATGTAACAAGCCGTTCACTCGCAAGGAACATCTGATCAACCATATGTCCCGATGTCACACTGGCGATCGCCCGTTTGCATGTGAAACTTGTGGCAAATCGTTTCCACTTAAGGGAAATCTACTCTTTCATCAGCGAAGTCACACTAAAGGACAAGATTGCGAACGCCCCTTTACCTGTGAAAAATGTCCTAAGACTTTTATCTGCAAAGGTCACCTCGTTTCCCATATGCGCTCACATTCAGGAGAAAAACCGCATGCATGCACTTTGTGCAGTAAAGCATTTGTCGAGCGCGGTAATTTAAAGCGTCATATGAAAATGAATCATCCGGACGCAGTCATGCCACCGCCCCCAGTGCCGCATCCACAAATACCAGCTGGAATTCTAACAGCCATAAAGCAGGAAATAAATCCGATCATAATTCCTCACCAAGCGCCAACAATGCACACAATACAACAGATCACAGGTGGTGCGCCTGGTGCTGCGGCTCCCAATACTATTCAATTGACGCCGGGCCTGGTACCCCTtgttgcaacaacaataacttcaCATAACGGCCAAaaacagcatcaacagcaacatcagcagcagcagcaacaacaacaagtgcaaCAACATCACCAGCAgttgcaacagcaacagcagcagttgcTGCAGCTGTCTATACAGCAGGCAGCTcatcaccaacaccaacagcagcagcagcaacaacagcaacaacaacaagaacagcatcgtcaacatcagcagcagcagcagcaacaacaacagtcgcaccatcagcaacaacaggcGGCTCAACAACAAGCCCATCAGCAACCACAGCCGCCTCCAGTGCCGATCGCTTTGATACAGACCGATCCCAGCGCATTAGCCCGCGCGGCTATGCAACTTCAGCATCTACCAGGAAGCGTTGAGCAGCATCCGGTAGtttattaa
Protein Sequence: MNTEHASATPGESATNQQQNDSNQPQNQHSPQEQAEHLRNSQLNQGSGQASYNIDVTSSTATVPSFMPPLATHVNINQATNPSLSKANHLPLPPSRNVVGNDSSGNNESSVPALPIPQAMLANASIAQQLPNGTIITQRHPSVEQHQQQLHVHAAMSSTDDNRQHVPQQQQQQHVAVQQQPHQQDNSKEEKSYAANGKVNQQMIIQQVTTTTTPTTSSAGGSTITLGTSKSDNKDQQQDQQLGKPPPGIEMYKVNIEDISQLFTYHEVFGKIHGEVMNHQMSTHSVANPNGASVTTSSNSMATISTTNTTTGSGITPPSTTSNLTTTIASGTTTVTTTGTAGASGELLMPKMEGGIGVDQATTLTLAPDGTPIATGNHVCDICGKMFQFRYQLIVHRRYHSERKPFNCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIICFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTFCTKTFTRKEHLTNHVRQHTGESPHRCSYCKKTFTRKEHLTNHIRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQDCERPFTCEKCPKTFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAVMPPPPVPHPQIPAGILTAIKQEINPIIIPHQAPTMHTIQQITGGAPGAAAPNTIQLTPGLVPLVATTITSHNGQKQHQQQHQQQQQQQQVQQHHQQLQQQQQQLLQLSIQQAAHHQHQQQQQQQQQQQQEQHRQHQQQQQQQQQSHHQQQQAAQQQAHQQPQPPPVPIALIQTDPSALARAAMQLQHLPGSVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01181322;
90% Identity: iTF_01201043;
80% Identity: -