Cqua017533.1
Basic Information
- Insect
- Conops quadrifasciatus
- Gene Symbol
- Hr39
- Assembly
- GCA_949752815.1
- Location
- OX457080.1:23793099-23797651[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.24 3.2e+03 -2.2 1.0 81 170 65 91 12 125 0.47 2 4 0.34 4.5e+03 -2.8 3.1 105 158 356 408 276 448 0.47 3 4 1e-15 1.4e-11 45.1 0.5 1 150 615 758 615 770 0.63 4 4 2.3e-81 3e-77 261.3 0.5 200 408 772 973 760 973 0.95
Sequence Information
- Coding Sequence
- ATGTCGACAGCGAAGGCGGAAAGCGCACCACCACCGGCTGGTGCGATTGTAAGCACCGAAAACGCAGCAAATACTATGATGCCTTTCAATGCCGGCatttgcagcaacagcaataatagTTGTTCCTTTCAATTGGCCGCTAATATgagccacagcagcagcagcggcgctTGCCACGATAGCGGTTCGAATAGCAACAGCAATCATGTTGCCTCATCCTCATCGTCATCGTCCTGCATGCCATCGCCGCGATCAGCGACAACCACACGCAATAACATTTCCGTGACGAATATCAAATGCGAAGCCGACGACCTGAGAATGTGTACCGCAAACGGCACAACgaacacagcagcagcaacaacgctCAATGGCAATTTGGTCCCAGTGATAGCAACAGTCGCGGCCAGCAGTTACTTCACCGAGGGCAGGGGGAATGGTCCCCCTACCGGTACTGGTGGCGGGGGCTGCGGCGGTTTGCGGCGTATACCAATATCCAAGGCTGACGATTCCGACTCAGAGGCTGAATTAACTAATATCGAAAATCTTAAAGTAACCCGCAGGACGAGTGTTGCTGGTTGTGTGGGAGGAGGGGAAGGGGCAGGGGCTGGGGCTGGAGGAGTCGGAGGAGAAAGTGTTGGACTTATTGGTGGTGTTATTACAGCCTCTGGTAGCGCCGCCCTGGTTAATCACAATAAGAATGGACCGCGTCCGATGTCTTGGGAGGGTGAGCTCTCCGAGTCGGAGGCGGCGGAAGCGAATCTCATGGAGACGGAGAACTCCGTAAGCAATGATAAGCAATACGGAGACGCCGGTGGATTGACGGTTATCAAAAGCGAGGTCACAACTACGACGTCCGCTACCGCAGTGCCACCGCTACCGCAACAACTCGGGCAACATCTCGGCATTAAGGCCGAGTTGGAACCAATATCCGTCGAACTCATTTCGCCCTATGCCAAGATCAATCTGGCACAGCCGCAAAGCGACCCAATTAATCTGAAATACGAGCCCGGTCCCGACAATAGCACAGCGCAGACGGTCTCCCTGAATTCACCGCTTTTGGTGCGCAACAAATCCGCGGGCAACCTGCTGCCCGCAAACCCCTCCCCCGATTCGGCCATACATTCCGTCTACACGCACAGTTCGCCCAGCCAGTCGCCGCTGACGTCGCGACACGCGCCCTACACGCCTTCGCTCAGTCGCAACAACAGTGACGCTTCGCACAGCTCCTGCTACTCGTACAGTTCCGAGTTCAGTCCGACGCATTCGCCCATTCAGGGGCGACACTCAGCAGTTGCGGTTGCGGCAGCGGCCGCTGCAGCAGCGTACGGTAACGCTTTCAACGGTGCAGCGCTGCATCATTCGGTGTTGTACCGACCGATTACGCTGGATGCCGGTAGCGGCAATGGCTGCGGTAGCACCAGCAGCGCTGCACCACCCGGACCCGGTGCTCCGATTGGATCAACCATGAACAGCAACGATCTGCCGCACAATCTCAGCAATAATGCGCGTTCGCGTTCCACAGTGCATGAGGAGATGCAGCTGGATGGGAACAGTAGCGGCAGCGTAGGTACCGGTACCAGCTCGGAACCCATTCCATCGCCGGGCATCTCGCGTCAGCAATTGATCAATTCGCCGTGCCCCATTTGCGGCGACAAGATATCCGGCTTTCATTACGGCATCTTCTCGTGCGAATCCTGCAAGGGGTTCTTCAAACGTACCGTCCAGAATCGTAAAAACTACGTGTGTGTGCGGGGCGGACCTTGCCCCGTTAGCATCTCAACGCGCAAGAAGTGCCCCGCCTGCCGCTTCGAGAAGTGCCTGCAGAAGGGCATGAAATTGGAGGCTATACGAGAAGATCGCACGCGTGGCGGCAGGTCCACGTATCAGTGCTCGTATACGTTGCCCAATTCGATGCTGAGCCCGTTGCTCAACAACAGTTCGGAGCAGCAGGGCGTGGCAACGGTGGGCGGCGGCGGTATTGGCAGTCAACAAGCACAGCAGCGCACTGCAATGCTTAGCACAAAGTGTAACAATGCGTATGTCGCCAGCATTAAATCGGAGCACAGCGAATATTCGTGTGTCCTGAATGGAAACTCGTCGGCACGATCAGCTGGCAGTGTTCCGGTCCTACTGCAGGAAATTATGGATGTTGAACATCTGTGGCAATACAATGAAGCGGAGCTGGCCCGGCTTAACCAACCGCTCGCTTCTGTCTCTTCATCATCTTCCTCGTCCTCGTCCTCCTCTACCGCCGTCCCCTCCGGTGCCAATTCAATCTCTACAAATCCACTGCTGGCCAGTGCGGGCCTTTCGTCGAATAGCGAGAACGCGAATCCGGATCTGATTGCCCACCTCTGCAACGTGGCCGATCATCGTCTCTACAAGATTGTCAAGTGGTGTAAGAGTTTGCcacttttcaaaaacatttcgATCGACGATCAAATCTGCCTGCTGATTAATTCGTGGTGTGAACTCTTGCTCTTCTCTTGCTGTTTTCGGTCTGTCGATACGCCgggagaaataaaaatgtcgcagggtaaaaaaatttccttggCTCAAGCAAAATCAAGCGGTTTGCAGGCCTGCATCGAACGCATGCTGAACCTGGCAGATCATCTGAGACGTTTGCGTGTCGATCGTTATGAATATGTTGCCATGAAAGTGATAGTGCTGTTGCAATCTGATACATCAGAGTTGCAGGAACCGGTAAAAGTGCGTGAATGTCAGGAAAAAGCGCTACAGAGTCTTCAGGCCTACACGCTGGCACACTACCCCGATGCACCATCGAAATTCGGCGAGCTGTTATTACGCATACCTGATTTGCAACGGACGTGTCAACTTGGCAAAGAAATGCTGACAATTAAATCGCGCGATGGTGGCGATTTTAATTTACTAATGGAATTATTGCGCGGAGAACATTGA
- Protein Sequence
- MSTAKAESAPPPAGAIVSTENAANTMMPFNAGICSNSNNSCSFQLAANMSHSSSSGACHDSGSNSNSNHVASSSSSSSCMPSPRSATTTRNNISVTNIKCEADDLRMCTANGTTNTAAATTLNGNLVPVIATVAASSYFTEGRGNGPPTGTGGGGCGGLRRIPISKADDSDSEAELTNIENLKVTRRTSVAGCVGGGEGAGAGAGGVGGESVGLIGGVITASGSAALVNHNKNGPRPMSWEGELSESEAAEANLMETENSVSNDKQYGDAGGLTVIKSEVTTTTSATAVPPLPQQLGQHLGIKAELEPISVELISPYAKINLAQPQSDPINLKYEPGPDNSTAQTVSLNSPLLVRNKSAGNLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHSAVAVAAAAAAAAYGNAFNGAALHHSVLYRPITLDAGSGNGCGSTSSAAPPGPGAPIGSTMNSNDLPHNLSNNARSRSTVHEEMQLDGNSSGSVGTGTSSEPIPSPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCPVSISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLLNNSSEQQGVATVGGGGIGSQQAQQRTAMLSTKCNNAYVASIKSEHSEYSCVLNGNSSARSAGSVPVLLQEIMDVEHLWQYNEAELARLNQPLASVSSSSSSSSSSSTAVPSGANSISTNPLLASAGLSSNSENANPDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSVDTPGEIKMSQGKKISLAQAKSSGLQACIERMLNLADHLRRLRVDRYEYVAMKVIVLLQSDTSELQEPVKVRECQEKALQSLQAYTLAHYPDAPSKFGELLLRIPDLQRTCQLGKEMLTIKSRDGGDFNLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00366559;
- 90% Identity
- iTF_00366559;
- 80% Identity
- iTF_00366559;