Cqua014314.1
Basic Information
- Insect
- Conops quadrifasciatus
- Gene Symbol
- bab2
- Assembly
- GCA_949752815.1
- Location
- OX457079.1:31674437-31676183[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.5e-18 1.5e-14 54.0 0.0 1 43 57 100 57 102 0.95 2 3 5.8 1.6e+04 -3.7 0.8 18 24 184 190 183 190 0.89 3 3 2.1 5.6e+03 -2.3 3.1 2 22 245 265 244 268 0.81
Sequence Information
- Coding Sequence
- ATGATCGAAGGAGGCGGACATCCTTGGATGAGCGGTGCCTCTACCTCTTCCGTGGCTGACAGCTACCAGTATCAGCTGCAGTCCATGTGGCAGAAGTGCTGGAACACCAATCAACAGAACCTGGTGCAGCAGTTGCGGTTCCGTGAGCGCGGCCCATTAAAATCGTGGCGCCCGGAAGCCATGGCCGAGGCCATCTTCAGCGTCCTGAAGGAGGGGCTCTCACTGTCGCAGGCGGCCCGCAAGTACGACATACCTTACCCCACGTTCGTCCTGTACGCCAATCGGGTGCACAACATGCTCGGCCCGTCGCTGGATGGTGGCGCCGATCCGCGTCCGAAGGCCCGAGGGCGGCCGCAGCGCATCCTGCTCGGCATGTGGCCCGAGGAACTGATACGCTCGGTCATAAAGGCGGTGGTCTTCAGGGACTATCGAGAGATCAAAGAGGAGCTGGCCGGGCATCAGTATCCCAACGGAGGGGCCGCAGCGCATGCGTCTCCGTATGGAGCGCCTTCGGCTGCCAATGGCTATCACAACGCCTCCAAATTGGCCAGCATGCAGCAGGCGGCCCAGAGCGCCACTCTAGCGCCGCCGCCCGACACCACCAGCCCGCTCTCGACCATGACCGAGACCCTGCGGCGTCAAATCATgtcgcagcaacaacaacaacaatcgcctTCGGCTCAGTCGATCAACATGTACAAGTCGCCCGCTTACCTGCAGCGCTCCGAGATCGAGGACCAGATGTCTGCCGCGGCTGCTGCGGCGGCCAAGCAGCAGGCGAGCGGCAGCCGTGCCGGCGCCGAAAACCTGCCCGACCTGAGCGCTTTGGGTCTCATGGGCATCCCCGGCCTGAATGTGATTCCGACGCAAGCGCAGCGCGGCAACCAGCTACATCCGAACGCAGTGGCAGCGGCCGCGTACTCGCGGGAGAGAGAACGCGAAAGAGAGCGTGAACGAGAGCGTGAACGAGAGTTGAAAGAAGCCATGCAAGCTCGCCAATACGGTAACCAGTCACGCGGCTCGGCCTCCAACCAGAAACATTCCGCCGCCGCGTCGGCCGGCCatgccgcagccgcagccgcagccggaGCTCGCAGTGGCGCCGCCTCACCGTTCGGCCAATACAAGAGCAAGGAGCACCCGAGCTACGCGTACAATAAACGCTTCTTGGAGAGTCTGCCGCCCGGCATCGACTTCGAGGCCATCGCCAATGGGTTGCTGCAGAAGTCGGTGACCAAGAGTCCGCGCTTCGAGGACTTCTTCCCCGGCCAGGACATGAGTGAGCTCTTCGCGAATGCGGAGGGTGCAGCGGGCGCGGCCTACCCGCCGGTGCGAGAGTCACCGCTGATGAAGATCAAACTGGAGCAGCAGAGCGCCGAGGTACCGCATGAAGATTAG
- Protein Sequence
- MIEGGGHPWMSGASTSSVADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGADPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEELAGHQYPNGGAAAHASPYGAPSAANGYHNASKLASMQQAAQSATLAPPPDTTSPLSTMTETLRRQIMSQQQQQQSPSAQSINMYKSPAYLQRSEIEDQMSAAAAAAAKQQASGSRAGAENLPDLSALGLMGIPGLNVIPTQAQRGNQLHPNAVAAAAYSRERERERERERERERELKEAMQARQYGNQSRGSASNQKHSAAASAGHAAAAAAAGARSGAASPFGQYKSKEHPSYAYNKRFLESLPPGIDFEAIANGLLQKSVTKSPRFEDFFPGQDMSELFANAEGAAGAAYPPVRESPLMKIKLEQQSAEVPHED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01200835; iTF_01414887; iTF_01181076; iTF_00972112; iTF_01486095; iTF_00624664;
- 90% Identity
- -
- 80% Identity
- -