Canc009571.1
Basic Information
- Insect
- Conomelus anceps
- Gene Symbol
- -
- Assembly
- GCA_948455865.1
- Location
- OX418224.1:46118188-46124292[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 4.3e-05 0.021 17.6 2.0 1 23 91 113 91 113 0.97 2 28 2.1e-05 0.01 18.6 3.0 1 23 123 145 123 145 0.98 3 28 0.0014 0.66 12.9 0.7 1 23 168 191 168 191 0.95 4 28 0.0016 0.77 12.7 1.2 2 23 198 220 197 220 0.95 5 28 0.19 92 6.2 0.2 2 23 316 338 315 338 0.91 6 28 0.0016 0.79 12.7 0.8 1 23 369 392 369 392 0.95 7 28 0.2 97 6.1 1.3 3 23 400 421 398 421 0.93 8 28 0.00044 0.21 14.5 0.6 1 23 433 455 433 455 0.98 9 28 0.0011 0.54 13.2 0.2 2 23 509 531 508 531 0.94 10 28 2.1 1e+03 2.9 3.4 1 23 550 573 550 573 0.95 11 28 0.01 5.1 10.1 0.8 3 23 581 603 580 604 0.91 12 28 0.011 5.5 10.0 0.1 2 23 613 635 613 635 0.96 13 28 0.0071 3.5 10.6 0.2 1 23 641 664 641 664 0.95 14 28 8.2e-05 0.04 16.7 2.6 1 23 672 694 672 694 0.98 15 28 0.00012 0.058 16.2 0.5 2 23 756 778 755 778 0.95 16 28 0.014 6.9 9.7 2.5 2 23 785 806 784 807 0.94 17 28 0.032 16 8.6 5.2 1 21 829 849 829 850 0.94 18 28 8.2e-05 0.04 16.7 0.4 2 23 864 886 863 886 0.95 19 28 3.7 1.8e+03 2.1 1.2 2 23 920 943 919 943 0.92 20 28 0.019 9.5 9.3 1.3 2 23 951 973 951 973 0.97 21 28 0.71 3.5e+02 4.4 1.6 3 23 981 1002 979 1002 0.94 22 28 0.00022 0.11 15.4 0.2 3 23 1012 1032 1011 1032 0.98 23 28 0.015 7.3 9.6 0.7 1 23 1037 1059 1037 1059 0.92 24 28 0.0042 2.1 11.4 1.6 6 23 1182 1200 1177 1200 0.91 25 28 0.014 6.7 9.7 5.7 2 23 1300 1322 1299 1322 0.95 26 28 0.41 2e+02 5.1 0.6 2 23 1329 1351 1328 1351 0.95 27 28 0.75 3.6e+02 4.3 2.0 1 23 1362 1384 1362 1384 0.93 28 28 0.00051 0.25 14.2 0.3 1 23 1396 1419 1396 1419 0.95
Sequence Information
- Coding Sequence
- ATGTTTTTTGATGATGCCTACATGAGTTTTGAGACTTGTGCCAGGTATCTGTTTAGTCAGATAAAGATAAACCACGAACTTCTGGGCCCTCTTTGTAAGGGTGACCGATTGGATTGGCCAGCAAAAACACTGTTCTTGCTGTATAATCACTTCCCGGTGGTTGGAGAATCGGTTGGCAATGGCGTGCAAACTGACATCAGAGAGGGAATGTCGGCCATTGTGGTCGACTATGACTGCCTGCCGCAGCGCGTCGCGACGCCGCCCGACGACTTCAGGTGTCAGACGTGCGGTCGAACGTTCAACTCGAGAGGCGCTCTCACACAGCACTCGAAATATCACACTGGAGAATCCGATCAAACGCAGGTCTTCACCTGTCATGTCTGCGAAAAGGCTTTCTCAAGCAAAGGACACCTTGCGTCTCACTCAAAAGTACATATTGGGGACATAGCAGACCGACCAACACCCGTAGAAACTCCTTCATCCATCGGAGCACTCCGACCATTCAAATGCGACCTCTGCGAAAAGTCCTACTCAATGGCGAAACACCTCTGGGGCCATGTCAGTGTCAGTCACAAGGGTGACCCGAAAGTAACGTGCCAGTTTTGTAGTCGAACATTCTCAACCATTGCCAACCTTGAAGATCACAAAAAGTATAAACACAACATAGAAACAGAAACCGATAAGAAAGATAAAGTTGATGTCAAGGTTGAAGCGAGAGATGATGAAGATAGCATCAAAGTTGAGGAGAATTCCAGTCAGTCTGTTGTCGAGGAGCAAGGTGGTAGTAGAAGGAAGAGTTCAAAGCCGAGGAAAATCAAAAGGGAAGTTGTTAATCATTCCGAATCAGAAGTTAAAGATGAACCACTCGATTTAGCTACGACTAGCTCCACAGCGGCTATAACTGAGGAGGAGTCATCAAGGAGTGAAACAACAGAAAAATCTCTATCTTGTCTGTTTTGTGAAAGTGTTTTCCCAACCCGCCCTCTCCTCAACCAGCACCTACTTGACAAGCATGAAATCAATCCAGAAGACATCACAACATCTCCAGGACCTCATGAAGAAGATATAAAAATGGCTGAAAATATGTTGGAAGCTGAAACCGTTTTCTGTTGTGAGATTTGTGTGCGAGATTTCAATGATAGAGCGAGCTTATGGTTGCATATGTTGTATTCCCATCGTGAAGAAGCAGCAACAGCTTGTGGGATATGCCTACGTGTGTGTTCAGATAATGTGAGTCTCATGGAGCATGTGTACAGTTGTCATCCAAAAGACAGTTTAACTGCTGATCAGAAACGGTACAGTTGTCAGATATGTGGACGACAGCTCGATTCGAAAAAGAAGTTGTTGACACATGTTAGGATTCATAATCTTTACGATGATACGGGACAAATTTTGGATCCGGAATCTGTGATTGTGCTAAACAATAAAAATCGTCAAATGCCACCCGCAAACAGTCAGATAAAAGAGAATAGTCAGTTTGATATCCAACATGAAGTGTTCACCGAGGAAGGTCAGTTGATTATGAGCTGTGAAATTTGTTACAAGGTGTTCCCAAATGAGGAAAAACTAGTCAAGCACAAACAAAACGCTCACAGGAACTCACAAGGCCCCAACAGTATTAATAGTTCTACAACTTATTTCTTGTATTTCTCATGTGAACTGTGTGGATTGGCGCACTCGACTAGAACGGAAAGATGGCGGCACATGTACTCCTGTCATGCAGATGAGCCTACATTGCTTTGTGACCAGGAAAAATGCGGCAAAGTGTTTCCAACAAGAGCATTGAGGACTGAACATGTTTCCACACATCACAACCTCCAAGGAGACACACCCAACACATGTGAGATATGTGGAAAATTGTGGGCTACACGAGTTAACTACTGGAAGCACATGATGAGTGTGCATTCGGATTGTTTGCCGTTCATTTGTGGAGTTTGTTTGAAGGTATTCTGCTCAGTGCCTGATTTGTCTGCTCATGTGAGAGAAAAGCATTGGCCTCTGTCGGGTGGGGATTACTGCTGTGACATTTGCGGCCGGCCTTACCCCAACAAATCAAAAATGTTCCGCCACAGAAAAATCCATGTCCTCCCTGAATCTGAAGGAGGCCTACCAGCTGGCCACGAATTAGAAAGTATCCCAGTTGGAACCGAAGCTCGCCCCTCTTTAGAAGTTTATGATCAACTTACCTGTAGTCTTTGTCCCGACGAAGAATTCCAATGTTTAGAGGATTTATCCAAACATCGTAAATCAGCTCACAATCTTGTGCCTTGCGACCTATGTCCGAAATTCTATGGCCGCTCTTCTCACTTGTGGAAGCATGTTAATAAAATACACAAAAATCATCCCGACATCACATGCAGTGTATGTTTTCGTACATCTGCTTCACGGAATCACCTCGCGAATCACATTGCTAAACATCATCGTCACGAAGTGCTCTGTCAGAATTATGTAGATATTTGTGAGCTGTCCAACGAAGAGGCTGTTCATAATTGTGTAAAATGTAATAAGGTGTTTAGGAAGCATATTTTGATGAAAAAACATATGAAACATTGTACCGGGCCTCCCAACCAGTCAGGCCCTATGCCGTCGCCTTGTGAAAGGTGCTCGAAAGTTTTCGATTCTCCAATTCAACTTCGTAAACATCTTAGGAACTCACATCTGTTATTTAGGTGTGAACTATGTGAGGATGTTGCTCACGACTCACGTATTGAACTCATGGATCACATAAAGGAAGCCCATGCTGGCCATCCTAGTTTGTCATGCGATTATAAAGGCTGTGGAATGATGTTGCGTTGTAAGTCTGATGTAGCTAAGCATAGAAGGGAACACAGACAGGGTAGGCCGCCTCCCACGTGTAGTTTTTGTGGAGAATTGACTCCAAATAAAATGAAGTTGAGAAATCATTTAAAAACGCAACACCCTCTATTAACTAAGCATCTGTGTTCGGTATGTTTGATTACTATGAAAGATTTTGAAGAGCTTAGAAAACACGTTCGTTCAAAACATAAATCTACCCTAGGCAAAACAAACATTTGTCCGATTTGTGTACGAACCTATTCAAACAAAAGTAAAGTTCTTGTCCATATTCGTTCTCATGGCGACGGTTTTTTCCCATGTGAAATATGTGTGAAAGTGTTCAGAGACCCAGAAAAGCACAAACGACATACTGACGCACATTTCGATGAGAACTCTGAAGAATTGGAAGCCGAAGAAGTGGAGGAAGAAGAAGTGGAAGATGCAGCTAACCAAGAGGAGGAGGAAGGGGAGGATGAAGAGGAGACGGTAGAAGAAAGTAAGAAGAGTGTGCCGAAAAAGAAAACAGATGATGATGAAGAGGAGGAGGATGAGGAGGAGGAAGAAGAAGAGGATGAAGAGACAAAGACTGAAGATGTTGAAAGTGTGATAACAAAAAGGACATCCGATGATGAGGAGGCGGATGAAAAGGAAGACGAAGTAAGCAGTAGTCAAATTGAAATAGAGGACGATGATACCAATGAGACGGTACCTGTGAAACGGCAGAGGCGAACGCATCCGTGTATAGCTTGTTCAAAAACATTCACAAATTCCACCAGCTTCCTAAGGCACATGAAAGCTGATCATACGGAACTGATTTGCGCGTGTGGCAAAATGAGCGAGAACATTCAGTCGCACAACAATCATCTAAAGAAGTGCATCACAGGGAAAAAGAAGGAAAGTGGTAAAATACAGGTGGAAGAAAAGAGAACGCCTAACAGGAGAAGTTTGGAAAGAAAGTTTTTGAATTCAGATAGTAAAGGATTGACGAATGCAGCTGCAGCTAAAGATAACAACAAATCGACTGAAAGTAATTCGGTTCCGAATACTAGTAGTGGGAAACGTGAGGTAAGACGAGTTTATAAATCGGATGATGGACTGTGCTCGTGTGAACTGTGCAAGAAGCAGTTTGAAGCTAAACGACATCTCTGGCAACATTTGAGAAGATTCCACCTCAAAGAAGCTGCAACATCGTGTGGTGTTTGTTTGAAAGTGTGCAAGGATTATTTGTCATTGGATTCTCATCTCGCAACTGAACACAAGAATAATTTTGAAGGCGAAGGTAAAAATTTCACGTGTCGTGTTTGTGGTCGATATCACAACTCCAGATCGAAATTGGAACAGCATTCTGTTATACATCCGGGACAAGAGATGAGAACTCACGCAGCGTTACATGCGTGTCCCTTGTGTCCAACAGTATTCAATTCGGCAGCCTCTCTTTCCACGCACAAGTCGACCGATCATAAAGAGAAATCTAAAGAGGTGGGCGGCGAGAAAGCGAtggaagtagtagatgtccatgatcatgacgaggatagtagaagtagcacgtctagcagtagtagcgcaaatagtagttgttcttctagtagcgggagcagttctagtagcagtggaagtagcagtagcagttcttctagtagcagttcgtcttcaagcggtagcagttccagtagcagtaacagttccgaggagggcgacgataaagatacgaagGATACAAAATCGAAAGAATCAAAGGTGAGTAAATTGTCTCCGTTGTTGAAGCAGGCGCAAAGACGACCGGAGAAAAGTGCGTGGTCCAGTATTCACAAAGAAGCTGTCAACAGATCCAGCGAACGAAACCGTAATTTATCCAACAATTTCAAAAGTAGCTCCCCCAATACAAACAAATCTAACGACATCAAATACAACAAACTACAAAATAATAAACAAGGGAATAAAATGTTCAGCTCCTCtggtggaaataacaattgtgttcagagtgttaatgatgatgatgacgacgatgatgatgatgtgattgtgctgagtgatgaaaataatgcaaatagtggtgctttcaatagtagtgatgcgaaatttgttgaggataaTGTGAATCTTTCCGAGGACAGTTCGGCGTCCTCAGATGAAGATGAGGATGACGAAGCTATGCGATCTGTTGCGGATCTCGAGAAAGATATGTCTGCTACCGCTGAGGTGTAA
- Protein Sequence
- MFFDDAYMSFETCARYLFSQIKINHELLGPLCKGDRLDWPAKTLFLLYNHFPVVGESVGNGVQTDIREGMSAIVVDYDCLPQRVATPPDDFRCQTCGRTFNSRGALTQHSKYHTGESDQTQVFTCHVCEKAFSSKGHLASHSKVHIGDIADRPTPVETPSSIGALRPFKCDLCEKSYSMAKHLWGHVSVSHKGDPKVTCQFCSRTFSTIANLEDHKKYKHNIETETDKKDKVDVKVEARDDEDSIKVEENSSQSVVEEQGGSRRKSSKPRKIKREVVNHSESEVKDEPLDLATTSSTAAITEEESSRSETTEKSLSCLFCESVFPTRPLLNQHLLDKHEINPEDITTSPGPHEEDIKMAENMLEAETVFCCEICVRDFNDRASLWLHMLYSHREEAATACGICLRVCSDNVSLMEHVYSCHPKDSLTADQKRYSCQICGRQLDSKKKLLTHVRIHNLYDDTGQILDPESVIVLNNKNRQMPPANSQIKENSQFDIQHEVFTEEGQLIMSCEICYKVFPNEEKLVKHKQNAHRNSQGPNSINSSTTYFLYFSCELCGLAHSTRTERWRHMYSCHADEPTLLCDQEKCGKVFPTRALRTEHVSTHHNLQGDTPNTCEICGKLWATRVNYWKHMMSVHSDCLPFICGVCLKVFCSVPDLSAHVREKHWPLSGGDYCCDICGRPYPNKSKMFRHRKIHVLPESEGGLPAGHELESIPVGTEARPSLEVYDQLTCSLCPDEEFQCLEDLSKHRKSAHNLVPCDLCPKFYGRSSHLWKHVNKIHKNHPDITCSVCFRTSASRNHLANHIAKHHRHEVLCQNYVDICELSNEEAVHNCVKCNKVFRKHILMKKHMKHCTGPPNQSGPMPSPCERCSKVFDSPIQLRKHLRNSHLLFRCELCEDVAHDSRIELMDHIKEAHAGHPSLSCDYKGCGMMLRCKSDVAKHRREHRQGRPPPTCSFCGELTPNKMKLRNHLKTQHPLLTKHLCSVCLITMKDFEELRKHVRSKHKSTLGKTNICPICVRTYSNKSKVLVHIRSHGDGFFPCEICVKVFRDPEKHKRHTDAHFDENSEELEAEEVEEEEVEDAANQEEEEGEDEEETVEESKKSVPKKKTDDDEEEEDEEEEEEEDEETKTEDVESVITKRTSDDEEADEKEDEVSSSQIEIEDDDTNETVPVKRQRRTHPCIACSKTFTNSTSFLRHMKADHTELICACGKMSENIQSHNNHLKKCITGKKKESGKIQVEEKRTPNRRSLERKFLNSDSKGLTNAAAAKDNNKSTESNSVPNTSSGKREVRRVYKSDDGLCSCELCKKQFEAKRHLWQHLRRFHLKEAATSCGVCLKVCKDYLSLDSHLATEHKNNFEGEGKNFTCRVCGRYHNSRSKLEQHSVIHPGQEMRTHAALHACPLCPTVFNSAASLSTHKSTDHKEKSKEVGGEKAMEVVDVHDHDEDSRSSTSSSSSANSSCSSSSGSSSSSSGSSSSSSSSSSSSSSGSSSSSSNSSEEGDDKDTKDTKSKESKVSKLSPLLKQAQRRPEKSAWSSIHKEAVNRSSERNRNLSNNFKSSSPNTNKSNDIKYNKLQNNKQGNKMFSSSGGNNNCVQSVNDDDDDDDDDVIVLSDENNANSGAFNSSDAKFVEDNVNLSEDSSASSDEDEDDEAMRSVADLEKDMSATAEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00857884;
- 90% Identity
- -
- 80% Identity
- -