Basic Information

Gene Symbol
SMARCC2
Assembly
GCA_948455865.1
Location
OX418219.1:51619238-51637495[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-14 5.1e-11 44.9 0.2 3 44 481 522 479 524 0.95

Sequence Information

Coding Sequence
ATGGACCGCAACGTTGAGATGTTGATGAGTGTTGAGAAGGCGCTTGTACAAAATAAGTGCTTGACACTGCCATCTGTATTTATACGCTCGGAAGTGGACAAAGCTACAGCAACCAAAGTTAAAGATGCAATCAAAAGGCACCAGGGCACTGTAGCAGATAACGAGGAAGACGCAACACACGTGATTTATCCAGCTTCGGATCCACTTGATGAGGAGTACGCAAGGCCGTCGTTCAAACGCGATCGCATGGTGATGATGCACTGGTACTATTTCCCCGATTCCTACGACTCGTGGGTGGCCGTCGATCTTCCCGTCGATCCACCCGATTCTCCTGTACAACACTCCTCACAATGGAAGGTTTCAGCGTCTTGGGCTTTGGACCTGGATCAGTACAACGAGTGGATGAATGAAGAGGACTATGAAGTTGATGAAAGTGGAAGGAAAAAAGTGCACAGGTTGAGGCTAACAGTGGACGATCTCATGAGTACATCTGATCCTGATAGAACGAAAAAGAAACAAAAGAGAAAGCGATCTCCATCTCCACCTGTCAAAATGGGGAAGAGGAAAAGGTGTGTAAAAAATTGTGCATTAATAAGTGGTCTGCTTCGGATTTTGGTGAAGAGCGAGGAGGAGGCTGATGACCTCACCAAGGACATGGACGAGCCAACTCCTGAGCCAAATGTACAGGAGGTCACTGTGCCCAAGCCAGGCTCTTCAACTTCTTCGAAAAAAGATAGTGATACCCAGCCTATTAAGAGTGGCACTGTCGCTGATTTAGATGAAGAAATGGACAAAGGAGAAGATAGCCAAACTGGAAAAATGTCTGATACTAACACTCAGGACGTAACAATGAAAGATGACAGTCAGGAAGATAATGTCACTGAGCAGACTCACCACATCGTGATTCCCAGTTATTCGGCTTGGTTCGATTACAATTCAATTCACACAATTGAAAAGAGAGCGATGCCGGAGTTCTTCAATGGCAAGAACAAATCGAAAACTCCCGAAATCTATTTGGCATACAGGAACTTCATGATTGACACCTATCGTTTGAATCCGACCGAATACATAACTAGCACTGCGGCTAGAAGGAATTTGGCTGGAGATGTGTGTGCCATTATGAGAGTTCATGCTTTTCTCGAGCAGTGGGGACTTATCAACTATCAGGTTGATGCGGACAGTAGGCCTACGCCAATGGGTCCTCCTCCCACCTCCCATTTCCATGTGCTATCAGATACGCCCTCTGGACTGCAGCCAGTTAATCCACCCAAGACGCCGCAGCCCTCCGCTGCCAAGACACTGCTCGACATGGACAAGAAAAACGATCTCACGCCCAAGAAGAGTGAAATCGAGCCGGGAACCAACTTCGGCCTTAAACTTGATCAATACAGCAGGAAACCAGCTGCTCTTAGGAATAAAACGGCGGCAAGTATGACAAGAGACTGGACAGAGCAGGAGACCCTGCTGCTACTGGAAGGTCTCGAACTGTACAAAGACGACTGGAACAAGGTGTGCGAACACGTCGGCACTCGGACACAGGACGAGTGCATTCTCCACTTTCTCAGGCTGCCAATCGAGGACCCTTATCTGGAGGATCACGAAGCAGGTGGTGGTGCACTGGGACCTCTTGCCTATCAGCCAATACCATTCAGCAAAGCTGGAAATCCTATAATGTCGACTGTCGCATTCCTGGCTTCGGTCGTAGACCCAAGAGTAGCTGCTTCAGCTGCTAAAGCAGCCATGGAAGAATTCGCCAGCATCAAAGATGAAGTACCAGCTGCTCTGATGGATGCGCATATAAAGAATGTTGAAGCCAACACTGCTGCTGATGGCAAATTTGATCCTGCAGCTGGACTGATTCAGAGTGGAATCGCTGGCACAGTTCCTGAGAAGGATGAAGAAAGTGAGAAAGAGAAAAAAGATAGTGAAAGTTCGAAAGAAGAAGCGAAAGAAGGTGCAGGTAAAGAAGCTGCAGCGCCAGGTAAAGAAGCAAGTGCTGCAGCACCAGCTTCAGGCGACGGAGAAGTAGTTGTGAAGAAGGAAGCAATAGAAAAGGAATCACCAGAACCGGGAAGTGAAGCAATGGACGTGGATAAGAAGCAAGAAAGCACCGAAGGAAGTGGCGAGGTGAAGGAAGAAACCGAACGAGATCGACTCGTGAAAGATGCTCAGCTGCAGTCAGCAGCTGCTGCAGCTCTTGCAGCCGCTGCTGTCAAAGCTAAACACCTGGCAGCTGTTGAGGAGCGTAAAATCAAATCTCTGGTAGCATTACTGGTCGAAACACAAATGAAGAAGCTGGAAATCAAGTTGAGGCATTTTGAAGAGTTGGAAACAACAATGGAGCGTGAGAGAGAGGGTCTCGAGTACCAGAGACAGCAACTCATTCAAGAGAGACAGCAGTTCCATTTGGAGCAATTAAAAGCGGCCGAATTTAGAGCGAGACAACAGGCTCATCAGAGGCTAGCTGCTGAACAACAAGGACAACAAACCACACCTTCAACCACCCCCACTCCACCCTCTCCTCAGGCTGTTCCCACCCCTCAGCAGGCTGCCACTTCCCCTTCTCCAGCGTAA
Protein Sequence
MDRNVEMLMSVEKALVQNKCLTLPSVFIRSEVDKATATKVKDAIKRHQGTVADNEEDATHVIYPASDPLDEEYARPSFKRDRMVMMHWYYFPDSYDSWVAVDLPVDPPDSPVQHSSQWKVSASWALDLDQYNEWMNEEDYEVDESGRKKVHRLRLTVDDLMSTSDPDRTKKKQKRKRSPSPPVKMGKRKRCVKNCALISGLLRILVKSEEEADDLTKDMDEPTPEPNVQEVTVPKPGSSTSSKKDSDTQPIKSGTVADLDEEMDKGEDSQTGKMSDTNTQDVTMKDDSQEDNVTEQTHHIVIPSYSAWFDYNSIHTIEKRAMPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTAARRNLAGDVCAIMRVHAFLEQWGLINYQVDADSRPTPMGPPPTSHFHVLSDTPSGLQPVNPPKTPQPSAAKTLLDMDKKNDLTPKKSEIEPGTNFGLKLDQYSRKPAALRNKTAASMTRDWTEQETLLLLEGLELYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDHEAGGGALGPLAYQPIPFSKAGNPIMSTVAFLASVVDPRVAASAAKAAMEEFASIKDEVPAALMDAHIKNVEANTAADGKFDPAAGLIQSGIAGTVPEKDEESEKEKKDSESSKEEAKEGAGKEAAAPGKEASAAAPASGDGEVVVKKEAIEKESPEPGSEAMDVDKKQESTEGSGEVKEETERDRLVKDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHQRLAAEQQGQQTTPSTTPTPPSPQAVPTPQQAATSPSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00283488;
90% Identity
-
80% Identity
-