Canc093340.1
Basic Information
- Insect
- Conomelus anceps
- Gene Symbol
- -
- Assembly
- GCA_948455865.1
- Location
- OX418223.1:8979773-8984108[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-12 2.3e-09 39.2 0.0 3 42 89 127 87 129 0.92 2 2 6.3 3.4e+03 0.2 0.0 2 18 548 565 547 567 0.73
Sequence Information
- Coding Sequence
- ATGGAAAACGGAATAAAAACACTTACAGTACATTATAGTAATACATTTGTTGTAAGTAAAAGGCAATTTTCTTTCAAGAATGGTGCGCCCCTCAGAGCCTTGCGCCCTGGAGCGACTGCTCCACTCGCTCCATTATCGAGTGATTCAAGACACGACATCGAAGATATTTCACAGGATTTTGAGCATAAAATCAACAGATTAGCCAAGCAGATTGAAGTTATGGAACCTGCAAAGAAGAAGAAGAAGTATCAAGACTACAGTCAAGATCTCCTGAACAAGGCATTAGCTGAAGTGAAAAAAGGAATGTCTTTTCGAAAAGCAGCAGAAAAGTTTGGAGTGTCAAAATCAACATTGAATCGGGCTGTGAATGAAAAAAATATGGGAAAAGTGGGGCGCCCTTTTGTTTTTGATGAAGAAACTGAAAAAGTTTTAGTAGAATGTATAGCTCTAGCTGGTGATTGGGGGTTTCCTCTAATTCTTCATGATATTCGACTGATAGTAAAATCATTCCTTGACAGAAAAGGTGTTAATGAAGTTCGATTTAGAAATAATATGCCAGGTCGGGATTGGGCAAGTTCTTTTGTGAAAAGACATTCAGATCTCTTAACAAAAAGACTTTGCCAAAATATCAAAAGATCAAGAGCTGCAGTCAGTGTCGAAACTCTAAATGCTTACTTCGATGAGCTACAAACCACATTGAAGGATGTAGAGCCTCATCTCATCATCAATTATGATGAGACCAATCTAACAGATGATCCTGGGAGAAAGAATGTTATAGTTCGACGTGGAACTCGTCATCCTGAAAGAATTTTGGACTCCTCGAAATCCAGTAATTCTGTGATGTTTTCTGGCACAGCTGCTGGAAACATGTTGCCTCCCTACATAGTTTACAGAGCTGAGAATCTATACAGTTCATGGTGTGAAAATGGGCCCAAAGGAACAATCTATAATCGGTCGAAAAATGGATGGTTCACAATGGAAATATTTGAGGACTATTTCAGAAACATTATAGTCCCCTACTTTAAACATTATAAAGAAGAACCCAAAGTACTAATTGGAGACAATTTGGCTAGCCATGTCTCACCATGGGTCATTCAATACTGCGTTGAAAATAATATCAGATTTGTTCTGCTCCCCCCAAATAGCACTGGCCTTTGCCAGCCACTTGATGTTGCTGTGTTTAAACCTCTAAAAGTCAAGTGGAGGGAGACTTTGGAGGAGTGGAAGAATAAGAATCGTGGTTCCATTTCCAAAGATGTCTTTCCTCGGCTTCTCAACAAATGCCTAGGTTTGATTGGTGAGGAAGCTGCTGAAAAAAACTTGAAATCAGGATTCAAGGCAGCAGGAATTTTTCCACTGGATAGAGAGCAGGTTATGAAGAGACTGCCAAAAAAAAAAGGCAATACCAGTGATACTGGTAATGACGACAGTGCACTAATAGTGGAAAGTTTTGAGGAGTATTTAGAAGAAGCTAGAAAAAAAGACACTGCCCCTCTAAAACAGCGGAAGAAAAAGCTCAATATAACTCCTGGGCAAAGTGTAACACAAGACAGCCTCAAGCATAGTGAGCCAGTACCAGTTCAGAAAAAGGTCAGATCTTCAAGAAAGAAGGTCAATGAAAAAGAAGATTCTGATTCCCTCCCTGAGGAATTTGATGAGGCTATCAGTAGTTCAAGTGAAGAGGAAGCAGTGAGTCAGCCTGAACCCAGCAGCAGTGGTGCTTCAAAAATAGTGAAAAATATAGTTGTTGACTCTTTTGTTGTTGTAGAGGTGTTGTACGATAAGGGAACCAAGAAAGAAAGTTTGAAGAAATTCATTGGAAAAGTGCTTTCAATTAATGGAGAGGACATTGAGGTGGGTTCCGAACCACCGGGAAGTGATTTTACAGCAGAGAAAAGTGTCTTTATGGTGGCCAATCTAATCGGTCACCCTTACAAAGAGTTCCCAGGAGAAAGTTAA
- Protein Sequence
- MENGIKTLTVHYSNTFVVSKRQFSFKNGAPLRALRPGATAPLAPLSSDSRHDIEDISQDFEHKINRLAKQIEVMEPAKKKKKYQDYSQDLLNKALAEVKKGMSFRKAAEKFGVSKSTLNRAVNEKNMGKVGRPFVFDEETEKVLVECIALAGDWGFPLILHDIRLIVKSFLDRKGVNEVRFRNNMPGRDWASSFVKRHSDLLTKRLCQNIKRSRAAVSVETLNAYFDELQTTLKDVEPHLIINYDETNLTDDPGRKNVIVRRGTRHPERILDSSKSSNSVMFSGTAAGNMLPPYIVYRAENLYSSWCENGPKGTIYNRSKNGWFTMEIFEDYFRNIIVPYFKHYKEEPKVLIGDNLASHVSPWVIQYCVENNIRFVLLPPNSTGLCQPLDVAVFKPLKVKWRETLEEWKNKNRGSISKDVFPRLLNKCLGLIGEEAAEKNLKSGFKAAGIFPLDREQVMKRLPKKKGNTSDTGNDDSALIVESFEEYLEEARKKDTAPLKQRKKKLNITPGQSVTQDSLKHSEPVPVQKKVRSSRKKVNEKEDSDSLPEEFDEAISSSSEEEAVSQPEPSSSGASKIVKNIVVDSFVVVEVLYDKGTKKESLKKFIGKVLSINGEDIEVGSEPPGSDFTAEKSVFMVANLIGHPYKEFPGES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00365573;
- 90% Identity
- -
- 80% Identity
- -