Cpun002330.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Conogethes punctiferalis
Gene Symbol
-
Assembly
GCA_031163375.1
Location
CM062078.1:15715305-15724022[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 0.00023 0.018 16.1 2.3 1 23 197 219 197 219 0.99
2 29 0.00066 0.052 14.7 0.3 2 20 250 268 249 270 0.93
3 29 6.3e-05 0.0049 17.9 0.2 2 23 301 323 300 323 0.96
4 29 0.0081 0.63 11.2 0.1 1 23 412 434 412 434 0.96
5 29 7.9e-05 0.0062 17.6 2.5 2 23 476 498 475 498 0.96
6 29 0.00021 0.017 16.2 2.0 2 23 539 561 539 561 0.97
7 29 0.0012 0.097 13.8 1.5 1 23 611 634 611 634 0.96
8 29 0.00076 0.059 14.5 0.1 1 23 695 717 695 717 0.97
9 29 0.00012 0.0096 17.0 2.7 2 23 729 750 728 750 0.97
10 29 0.052 4.1 8.7 2.6 2 23 762 783 761 783 0.96
11 29 0.0045 0.35 12.0 1.7 1 23 793 815 793 815 0.98
12 29 0.0052 0.41 11.8 5.0 1 23 844 866 844 866 0.97
13 29 0.0015 0.12 13.5 2.8 1 23 877 899 877 899 0.98
14 29 8e-05 0.0063 17.5 0.3 1 23 907 929 907 929 0.97
15 29 0.0007 0.054 14.6 0.4 2 23 949 971 948 971 0.97
16 29 0.21 16 6.8 0.2 1 23 989 1011 989 1011 0.93
17 29 0.55 43 5.5 3.6 1 23 1018 1040 1018 1040 0.94
18 29 0.03 2.3 9.4 4.3 2 23 1051 1073 1050 1073 0.95
19 29 0.0013 0.1 13.7 0.3 1 23 1095 1117 1095 1117 0.97
20 29 1.3 1e+02 4.3 0.2 2 20 1121 1139 1120 1140 0.91
21 29 8 6.2e+02 1.8 4.1 2 23 1160 1182 1159 1182 0.94
22 29 0.0046 0.36 12.0 0.2 2 23 1198 1219 1197 1219 0.95
23 29 3.6 2.8e+02 2.9 4.1 5 23 1229 1247 1226 1247 0.94
24 29 0.015 1.2 10.4 0.8 2 23 1258 1280 1257 1280 0.95
25 29 0.21 16 6.8 2.8 2 23 1297 1315 1297 1315 0.89
26 29 6.9 5.4e+02 2.0 1.9 2 21 1319 1338 1319 1339 0.93
27 29 0.19 15 6.9 0.5 2 23 1388 1409 1387 1409 0.93
28 29 0.01 0.8 10.9 0.5 2 23 1420 1442 1419 1442 0.96
29 29 0.57 45 5.4 3.6 2 21 1480 1499 1479 1500 0.94

Sequence Information

Coding Sequence
ATGGCCCTCAAGCTGGGCAAATGCAGGCTCTGCCTGAAGCTCGGCGACTTTTATTCCATCTTCGCGGTGGACAATGCCGTCCAACTCGCCGAGATGGTTATGGAATGCGCGCGGGTTAAGATATATGAAGGCGACGGCTTACCAGACAAGATCTGCTCGGAGTGCGTGCAGAAGCTGAGCAGTGCTTACATATTCAAGCAGCAGTGCGAACGCTGCGACCAGGAGCTACGGCGCAACTATGTGCCGCCGCCAGGTTTCAGCATCACCCCACCACCGCCGAACAGACAAAGCAGTGACTCGGCTTTCTCCACGCACACCGACGTCTCGAACCAGACCAAGCCGTCGTCGTCCAAGGAGTCgtacgcgccgcccgcgcacgccacgccgcgcacgcgcaaGCGCAGCCGCGAGAGCGACGCCGCCAGCGACCGCTCGCACGACTACGCGCCCAGCGCCAAGCGCGTCTCCGAACTACGCGCAAAAAAGCGCCCCACCACATACGAAGCAGACTCCGACTATGAAGAAGACACCAGCTTCTCCCCCTACTCCGGCGGTACCGACTCAGACGAACCCCTCATCAAAAACAAGTTCCAGTGCAAACAGTGCGACAGATCCTTCCCCACCATGAAGAGCCGCAACTCACATATGAAAGTCCACTCGAAAACCCAGAACTTAGGCAAGAATGAGGTCGTCAACATACCGAAGAAGTCCATCAATGAGGACGCGACCGATTCCGAGGAGAAACTATCCTGCGACAAATGCGGGAAGACATTCAAGCTGAACATAATGCTGAAGCGCCACTACGATCTCTGCGGCGTGCAAGTGGAGATATCTCCGCAGAAGGAGCTGATGATTGCGCTGGAGCCGATAGACGCGGTGCCGCCAAAGGTCAACAAAATCGAGTGCGACATTTGCACGGCCAAGTTTAAGACTGTTGAGAATCTCCAGAAGCATTTGAGGGTGGTGCACGCCGCGGCGCTCAAGCAGGAGTCGTCGCCGGTCAAGAAAGGTGTATCGGTCCCTTGCATATACTGTCGGAAGTCCTTCGACGAATACTACGTATACACGGCTCACTTCAACAGCTGTAGTAAGAAGCGTGATTTGGAAAGTCTTGAGTGTCCGGTGTGTATGAGGGTGATGGGCAAGCGGGCGGCGTACTTCGTGCACGTTAAGAACATGCACTTCGAGCCGCGGACGCCGAAGGCGGAGGCGTCCGAGAGCCGCAAGGAGTCGTTCGAGTGCCGGATGTGCAGCAAGATGCTGCCGTCGCAGGCGCAGCTCATCACGCACCTCGCCGCGCACATGTCCAAGATAGAGAATGTTCCCGACgaaatggctgatgatgactcaagATCCAGTACGGTGGGCGACACGGCTTCAATAGGCTCCGATTACAACTCCCCCTACGTCTCGTCGGGGCCGCTAAAGTGCAACTTATGCGACAAAAGCTTCAAATACAAGAAGGCGTTCGAAACTCACCAGCTAAAGTCGCATTCTGCGACAGAAATCTCCGTGAAAGTGGAGCCGCCTGATAAAAACTCGAGTTTGCTGAGCGAGACGCAGGAGCCAGGCCCGTCGGAGTCCGAATCTAGTCAGGAGGAAGGGGACGACAATACCTGTGATATATGCGAGAAGCAGTTCTCTTACAAGCGACTGCTGATACAACATAAACGGACGAAGCATAACATGAGCTCGGGCCATAAGCGAGCGAAGATAAATCTGAAAGATTGCTTGGTTCGCTGCCTGATATGCGATTTGGAGATGAAAGTGAGTGCGATAAACGAGCACAATCAGAAGCACATCTCGATCAATATAAAGCCGAGGAATGTGTACACCTGTGCGGACTGCGGAGACAAGTTCAAGAGCTGCAGTTCGCTCGCCAGCCACATTAAGTTTGTGCATCGCCTGAAGCAGCCTCGCGCGGCCAAGGCTCCGCGGGCGCTGGAGGGCGGCTCGGAGCTGGCGGATTTTTGTGAGGTCGTTGTGACTAAAGCGGAGCCCCTGGACGAAGTCCAGAGTCACAACGACTTTGGTGCGACCCCTGGAGGTTCCGCGGGGACGGCGGTGGTCAACGTGGGCGGCTTCACGTGCCCCCTCTGCGGGAAGACCATGCCGACTCTGATATCGCTTAAGAGACACGTCAACTGGCACGAGAACGTTGGCAACAATTTGGAGAAGAAGATCGAGTGTTTTGTTTGCAACGAGACGTTCCGTTTCCAAGGGCACTTCAAGCTGCACATGCGCTCCCACTACCACGACCCCAATCTGGACCCCAAACACTTGACCTGCCCCATCTGCCACCGGCGCAGCAAGCACCTACGCGCCGCACAGGCCCATATGAACTTCCACAAGCAAACCCGCTTCAAGAACAAAGACTACGAATGCTCCATCTGCAAGCGCGTCTTCCAACACAGAAAAGTCTACCTATCCCACATGGCGATACACTTCAAGCGAGGTGAGAGCGTACAAAACACTATTGTTGGCAGCGAGATCCCCCAAACAGCTGACCGGACCATATTCGACGGGACACACACCTGCTCCCTCTGCGGTAAGGTGTGCGACTCGGAGAACTCGCTGAAACACCACGAACGGTGGCACAAGTCCAAGACTTCGCTCTACGGAGCGCGACACGAGTGCTACGTATGCCAACTCGTGTTCACCAACAAGAGACGGTTGGAACTCCACACGAGAACGCACTTCGAGGACGATAATGGACCCTTCAAGTGCACCATATGCGGCAAGGGGTATATAGACGAGGGTTACTACCGCCGCCACGTCAAAGGACACAACTTTGACAACCAGGTGCATAAGGACAGAATAGCCAGGTTGAGAAAGGATAAGGTGAAATGTCCAATTTGTGCTCGCTTCTACCCAGATCTGATCCATCTGATCCGCCACTTGAGAAGGACTCACCCGGAGAGCAAGATGATAAAAACCGACCCGGACGCGCCACCTCCCAATTATTACAACTGCAAACTGTGCGCCAAGGTGTTCTTAGACCCAACAAGGTTGCAGAAGCACGAAGAAGCCCATATGAGGAAACCATTGTTCTACAAATGCAAGTTCTGCGGTAAGAACACCACGTCTTTAAAGGTGCATAACGTTCATATTAAGTCGCATTTGTGCCAGAAATACTTGGACGATCCTCTGAAGTGCGAGCACTGTGACGAGAAGTTCTACAAGGGTTACGCGTTGCATCACCACCTGCGGGATGCCCATCAGATCAACGAGACGTGGATAGCGGAGCGGACGGAGGTCACGCACAACGGACCGCTCAAGGAGTTCCAGTGTTCCGTGTGCTTGAAGGTGCTCGCCAGCAAAGGCAATTACGAGAGACACATTGACTACCACAACACAGTACGGTGTAACTACTGCTTCGTCTACTTTAGCACTCTCCGGTTTTTGGAGGGCCATCTGGCGTTCGGCTGCGAAAAGAAAAACCTCATCGGCGATACAGAGATATATCCGAAGAAAATCAAATGCCAGGAGTGCTACAAAGCGTTCCACTTGCAAGTCAAGTTGGATTGCCACCTGCGGACGCAGCACGGCATAAAGGTGAACAAAGAGGCGTCTTCTGGTAAGACGGAGACTGTCTGCGATTATTGCTTCAGAGTGTTCGAGAATGAGGAGGCTTTGAATTCGCACAAGATCTACCACCGCACCGTAGGCTACTACGGCTGTATATACTGTAAGCGGAAGTTTAACACGATCACGCTGTACAGGAAACACAAGAATCACCACTTCTCTCAGCTGAACGTGGATAATCCGACGAAGTGTGAGCATTGCGATGAGACGTTTGTCGCTTTCCGCGAGATGATATACCACATGAGAGATGTACACGGCGACGATAAGGAGTGGATCGTGATGCCGAAGGACTCTATAGAGGAGACCTGCCCCATATGCAACAAGACTTTCTTCAATCTGCATAGACATTTGGACTACCACGAGGAGAATAGATGCAAGAAATGTGCCGAGTACTTCTTTTCCAGAGCTGACTTTGACAACCATTTATGCTCTATAGAGAGTGATGACGAGAGCATCCAGAATAATGAGAACAGTCTCAAACGGGTGTACGAGGAATGCCCGTTCTGCTTCAAGCAGATGACGAATATAAGCTCGAGAGCAAAGCACGACGGTATACACAAGGGGTCTGGGTCTATATCCTGCCGGTTCTGCCCCCTCAAGTTCAAGACTATGGACGCGTTCAATATACATGCTTTCTCGCATAGAAGCAGAAAGTACAACAAGAGACCGATAAAGTGTCGCATTTGCCGCGAAAAGTTCGTGAAATACGGACCGTTTATGAGGCACATGAAGATTGTGCACAAGTCACAGAAGAAAGTGCATTATAGGGCGCAGGTGAAGCCCGAACGTTGTGTAGTTTGTGGAGACGAATTCCCCAACTTGCACAACCATTATCGAGCCCATTTGCAAAACCAGTGCCAGCAGTGCTCCAAATATTTCACGTCGTCCAGAGTGTTTTCCAAACACCAGTGCGACAAAGAAGATTCAGATCCCAGTAAGGTGTTTGAGTGCGACGAGAATCTCTTGACACTTATAAATTCGTATGTGCCAAAAGATTTGAAAGACGACGAGAAGTTTTACGGGCACAGCGATGAGGAAGACGAAGAGCCAGTGGTGAACGGTGTAGCTGCTCCGGAGCCGGATGTCATTGATCTGAAACCTAACATTGTTCACGATGAGGACAGTCAGAGCCAGCCGGAAGATCGAGGGGAGTCGATGACTTTCTCAGAAGACGAGAAGAATCTGCACTTGATGGTCTCGTCTCCGATAATATCTGACGTGTTGTCGTTGTACCAGCAAAAGGAAGACGACAAGAACAGCGACAACGATGTGGTCATTCTGACCGATGATGATTCTATGGACATTGCTATGAACATACCAGTTATTACTATTGATTAG
Protein Sequence
MALKLGKCRLCLKLGDFYSIFAVDNAVQLAEMVMECARVKIYEGDGLPDKICSECVQKLSSAYIFKQQCERCDQELRRNYVPPPGFSITPPPPNRQSSDSAFSTHTDVSNQTKPSSSKESYAPPAHATPRTRKRSRESDAASDRSHDYAPSAKRVSELRAKKRPTTYEADSDYEEDTSFSPYSGGTDSDEPLIKNKFQCKQCDRSFPTMKSRNSHMKVHSKTQNLGKNEVVNIPKKSINEDATDSEEKLSCDKCGKTFKLNIMLKRHYDLCGVQVEISPQKELMIALEPIDAVPPKVNKIECDICTAKFKTVENLQKHLRVVHAAALKQESSPVKKGVSVPCIYCRKSFDEYYVYTAHFNSCSKKRDLESLECPVCMRVMGKRAAYFVHVKNMHFEPRTPKAEASESRKESFECRMCSKMLPSQAQLITHLAAHMSKIENVPDEMADDDSRSSTVGDTASIGSDYNSPYVSSGPLKCNLCDKSFKYKKAFETHQLKSHSATEISVKVEPPDKNSSLLSETQEPGPSESESSQEEGDDNTCDICEKQFSYKRLLIQHKRTKHNMSSGHKRAKINLKDCLVRCLICDLEMKVSAINEHNQKHISINIKPRNVYTCADCGDKFKSCSSLASHIKFVHRLKQPRAAKAPRALEGGSELADFCEVVVTKAEPLDEVQSHNDFGATPGGSAGTAVVNVGGFTCPLCGKTMPTLISLKRHVNWHENVGNNLEKKIECFVCNETFRFQGHFKLHMRSHYHDPNLDPKHLTCPICHRRSKHLRAAQAHMNFHKQTRFKNKDYECSICKRVFQHRKVYLSHMAIHFKRGESVQNTIVGSEIPQTADRTIFDGTHTCSLCGKVCDSENSLKHHERWHKSKTSLYGARHECYVCQLVFTNKRRLELHTRTHFEDDNGPFKCTICGKGYIDEGYYRRHVKGHNFDNQVHKDRIARLRKDKVKCPICARFYPDLIHLIRHLRRTHPESKMIKTDPDAPPPNYYNCKLCAKVFLDPTRLQKHEEAHMRKPLFYKCKFCGKNTTSLKVHNVHIKSHLCQKYLDDPLKCEHCDEKFYKGYALHHHLRDAHQINETWIAERTEVTHNGPLKEFQCSVCLKVLASKGNYERHIDYHNTVRCNYCFVYFSTLRFLEGHLAFGCEKKNLIGDTEIYPKKIKCQECYKAFHLQVKLDCHLRTQHGIKVNKEASSGKTETVCDYCFRVFENEEALNSHKIYHRTVGYYGCIYCKRKFNTITLYRKHKNHHFSQLNVDNPTKCEHCDETFVAFREMIYHMRDVHGDDKEWIVMPKDSIEETCPICNKTFFNLHRHLDYHEENRCKKCAEYFFSRADFDNHLCSIESDDESIQNNENSLKRVYEECPFCFKQMTNISSRAKHDGIHKGSGSISCRFCPLKFKTMDAFNIHAFSHRSRKYNKRPIKCRICREKFVKYGPFMRHMKIVHKSQKKVHYRAQVKPERCVVCGDEFPNLHNHYRAHLQNQCQQCSKYFTSSRVFSKHQCDKEDSDPSKVFECDENLLTLINSYVPKDLKDDEKFYGHSDEEDEEPVVNGVAAPEPDVIDLKPNIVHDEDSQSQPEDRGESMTFSEDEKNLHLMVSSPIISDVLSLYQQKEDDKNSDNDVVILTDDDSMDIAMNIPVITID*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01071809;
90% Identity
-
80% Identity
-