Basic Information

Insect: Conogethes punctiferalis
Gene Symbol: -
Assembly: GCA_031163375.1
Location: CM062087.1:6231395-6259962[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.0013 0.1 13.7 0.1 1 20 422 441 422 441 0.95

2 19 0.00024 0.018 16.1 4.2 1 23 440 462 440 462 0.98

3 19 3.6e-05 0.0028 18.6 5.3 1 23 468 490 468 490 0.97

4 19 5.4e-05 0.0042 18.1 8.1 1 23 496 518 496 518 0.97

5 19 7.3e-07 5.7e-05 24.0 2.9 1 23 524 546 524 546 0.97

6 19 0.0001 0.0081 17.2 6.7 1 23 552 574 552 574 0.97

7 19 0.00024 0.019 16.1 5.6 1 23 580 602 580 602 0.97

8 19 5e-07 3.9e-05 24.5 1.9 1 23 608 630 608 630 0.98

9 19 5.1e-05 0.004 18.2 7.9 1 23 636 658 636 658 0.98

10 19 1.8e-05 0.0014 19.6 7.8 1 23 664 686 664 686 0.98

11 19 2e-06 0.00016 22.6 5.1 1 23 692 714 692 714 0.98

12 19 0.048 3.7 8.8 12.5 1 20 720 739 720 748 0.92

13 19 2.9e-06 0.00023 22.1 4.4 1 23 754 776 754 776 0.98

14 19 2.5e-05 0.002 19.1 7.1 1 23 782 804 782 804 0.97

15 19 2.5e-05 0.002 19.1 6.1 1 23 810 832 810 832 0.98

16 19 6.1e-05 0.0047 17.9 7.9 1 23 838 860 838 860 0.97

17 19 3.5e-06 0.00027 21.8 1.3 1 23 866 888 866 888 0.96

18 19 0.00075 0.058 14.5 0.3 1 23 895 917 895 917 0.96

19 19 0.12 9 7.6 3.9 1 23 928 950 928 950 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.0013	0.1	13.7	0.1	1	20	422	441	422	441	0.95
2	19	0.00024	0.018	16.1	4.2	1	23	440	462	440	462	0.98
3	19	3.6e-05	0.0028	18.6	5.3	1	23	468	490	468	490	0.97
4	19	5.4e-05	0.0042	18.1	8.1	1	23	496	518	496	518	0.97
5	19	7.3e-07	5.7e-05	24.0	2.9	1	23	524	546	524	546	0.97
6	19	0.0001	0.0081	17.2	6.7	1	23	552	574	552	574	0.97
7	19	0.00024	0.019	16.1	5.6	1	23	580	602	580	602	0.97
8	19	5e-07	3.9e-05	24.5	1.9	1	23	608	630	608	630	0.98
9	19	5.1e-05	0.004	18.2	7.9	1	23	636	658	636	658	0.98
10	19	1.8e-05	0.0014	19.6	7.8	1	23	664	686	664	686	0.98
11	19	2e-06	0.00016	22.6	5.1	1	23	692	714	692	714	0.98
12	19	0.048	3.7	8.8	12.5	1	20	720	739	720	748	0.92
13	19	2.9e-06	0.00023	22.1	4.4	1	23	754	776	754	776	0.98
14	19	2.5e-05	0.002	19.1	7.1	1	23	782	804	782	804	0.97
15	19	2.5e-05	0.002	19.1	6.1	1	23	810	832	810	832	0.98
16	19	6.1e-05	0.0047	17.9	7.9	1	23	838	860	838	860	0.97
17	19	3.5e-06	0.00027	21.8	1.3	1	23	866	888	866	888	0.96
18	19	0.00075	0.058	14.5	0.3	1	23	895	917	895	917	0.96
19	19	0.12	9	7.6	3.9	1	23	928	950	928	950	0.99

Sequence Information

Coding Sequence: ATGAATCCTGAACACCATAATATGAATACGGGTGGTGGCCAACCTCCTGGAAGTTCGGAGTCTCAGAACCAGAGAGTTCAATCTGCGCAGCAACAACAGCAGGCTGCTAATTTGCCTGCTACCACCTCTGCAACCGATCTTAGAGTAAATTCGGCAGCAGTGAATGTTGCTTTGTCTAGTGTCGCCAAGTACTGGGTGTTTACAAATTTGTTTCCCGGTCCGATACCACAAGTATCTGTATACGGATTACCCACAGGAGCAAGAATTGAGAATGGAAAACCTGTACAGGATCTCGGACAAACACATGCAAGCATACTTAATGGTGACCCCAACATTATATTGGGACATCATGGAGGTCAACCGCAAGTTACGGTATCAGCAGCAGGAACACAGCAAATCCCTGTGTCGCAAATCATTGCCACACAATCAGGACAACCACATGAGGCATTGGTGGCTCACAATCAACAACAGGAGCTTGCAGCCCAGCAAGCCTCACAAGGCACAGCCCAGGTCACAGTTAGTGCGGGCCAGCCCTCTCACCAGCAGGTACCCAATAACCGGGTCGAGTTTGTACAACACCATAACATTGATATGGGGCATCATTCACAACAGCACTTAATGCAGCAGCAACTTATGACCAGTGCCCGTCCGGAACACTCAAATCAGCAGATTCAGTTGACAGTAAGTGAAGATGGCATCGTGACAGTGGTCGAGCCGGGCGGTGGCAAGCTGGTGGACAAAGAAGAGCTACATGAAGCCATCAAGATGCCTACTGACCATCAGACTCTTACTGTACACCAGTTGCAACAGATTGTTGGTCAACAGgtAATAGACAGTGTGGTCCGTATAGAACAAGCGACTGGAGAACCAGCTAACATCCTTGTGACCCACAATCCCGACGGCACCACGTCGATAGAAGCCAGCGCCGGTGAGCAACTCATCGTCAAAGACGAGAAGAGTGCAACAGGCAAGATCGAAACTGCGCAGTTTGCTGAAATAAAGGATATGAAAGGAATTGACTTGAAGAATGTCGGCACGCTTGGCATGGAAGGAGCGGTGGTGAAAATTTCCGGAGCCTCCGAACATGACCTCCACGCCATGTACAAAGTCAATGTAGAAGACTTATCACAATTGTTGGCCTACCATGAAGTGTTTGGGAAGCTGAATGCGGATGGACAGCCACAAGCGAAGGTTATAAGTGAAGTAGAAGTGGAAGCAGGTACCAGCACTGCGATGGCGGCTGACGACTCTTCGCCCGGACACCACTCCTGCGACATTTGCGGGAAGATATTCCAATTCCGATACCAATTAATCGTCCATAGATGCGAGTTCTGCGCAAAGACTTTCACGCGCAAGGAACACATGGTGAACCACGTGCGGAAACACACGGGCGAGACGCCGCACCGCTGCGAGATCTGCAAGAAGAGCTTCACCAGGAAGGAGCACTTCATGAACCACGTCATGTGGCACACCGGTGAAACTCCACACCATTGCCAATTATGCGGCAAGAAGTATACTAGGAAGGAGCATTTATTGAACCATATGAGATCGCACACACTCGATACGGCGTTCCGATGCGAACTGTGCGGCAAGTCGTTCACCAGAAAGGAACACTTCACCAATCACATATTGTGGCATACCGGTGAGACGCCGCACCGCTGCGACTTCTGTTCGAAAACGTTCACCAGGAAAGAGCATTTACTCAACCACGTGAGACAGCACACCGGCGAGTCGCCGCACCGCTGCAACTTctgcgcaaagtcgtttacGAGGCGCGAGCATCTCGTCAACCACGTCAGGCAACACACGGGGGAGACGCCCTTCCAGTGCGGATATTGTCCCAAGGCGTTCACTAGGAAGGACCACCTCGTGAACCACGTTCGGCAGCACACGGGCGAGTCACCGCACAAGTGTTCGTTTTGCACGAAGTCTTTCACGCGCAAGGAACACCTCACCAACCACGTGCGTCAACACACGGGCGAATCGCCGCACCGATGCACGTTCTGCTCCAAGTCATTCACCAGGAAGGAGCATCTGACCAATCATATACGACAGCACACGGGTGAAACGCCACACAAGTGCACGCTCTGCCCGCGCGCGTTCTCGCGCAAGGAGCACCTCAACAACCACATGCGGCAGCACACCGGGGACATGCCATACTCCTGCACTTACTGCAGCAAGAGCTTCACGAGAAAGGAGCATCTCGTCAACCACGAGCATCTCAACAACCACATGCGGCAGCACACCGGGGACATGCCATACTCCTGCACTTACTGCAGCAAGAGCTTCACGAGAAAGGAGCATCTCGTCAACCATGTGCGACAACACACGGGCGAGACGCCGTTCAAGTGTTCTTACTGCACCAAGTCGTTCTCGAGGAAGGAGCACCTGACGAACCACGTGCACCTGCACACCGGCGAGACACCGCATAAGTGCGCGTTTTGCACCAAGACCTTCTCCAGGAAAGAGCATTTAACCAACCATGTCAGAATTCACACGGGCGAATCGCCACACCGTTGCGACTTCTGCCAAAAGACGTTTACGCGCAAGGAGCACCTTACGAATCATTTGAAGCAGCACACGGGAGACAAAACGCATGCGTGTAAGGTGTGCTCCAAGCCATTCCCGAGGAAGGAGCAGCTCGTCACGCATATGAGGTCACACAGTTGCGGCGACCGGCCGTTCAGCTGCGGCGAGTGCGGCAAGTCGTTCCCGCTGAAGGGTAACCTGCTCTTCCACGAGCGGTCGCACAACaagggcgcgggcggcgcggcgcggcagTACCGGTGCGACGTGTGCTCCAAGGAGTTCCTGTGTAAAGCTCACTTAGTTGCGCACAGACGTACGCACTCCGAAGGTACGGATAACTCTGGTAGCGTCGACGCATCATCAGAGATCGACGACTGTTCCGAATGCACAAGCAAGTGTGAAAAGAGCGAAGCGGAACGACCAGAAAGGAAACACGAAATAAGAGCATCCACTGAAAATAGGCCAACGGAAAATAATGTCGCACAAACGAATGCAGCTGTTATGCAAATAACTAATCAGGTGCGGAGCGCGCCGGCGCCGGGCGCGACGGCCGCCGCGGCCGCGCCCGCCTTCCCGCACCCCGCGCCGCACCACCCCGCCGCCGCCATCGCGCACCACCCCGTCACCGTCAACTACTAG
Protein Sequence: MNPEHHNMNTGGGQPPGSSESQNQRVQSAQQQQQAANLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGARIENGKPVQDLGQTHASILNGDPNIILGHHGGQPQVTVSAAGTQQIPVSQIIATQSGQPHEALVAHNQQQELAAQQASQGTAQVTVSAGQPSHQQVPNNRVEFVQHHNIDMGHHSQQHLMQQQLMTSARPEHSNQQIQLTVSEDGIVTVVEPGGGKLVDKEELHEAIKMPTDHQTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAGEQLIVKDEKSATGKIETAQFAEIKDMKGIDLKNVGTLGMEGAVVKISGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNADGQPQAKVISEVEVEAGTSTAMAADDSSPGHHSCDICGKIFQFRYQLIVHRCEFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQLCGKKYTRKEHLLNHMRSHTLDTAFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTFCSKSFTRKEHLTNHIRQHTGETPHKCTLCPRAFSRKEHLNNHMRQHTGDMPYSCTYCSKSFTRKEHLVNHEHLNNHMRQHTGDMPYSCTYCSKSFTRKEHLVNHVRQHTGETPFKCSYCTKSFSRKEHLTNHVHLHTGETPHKCAFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHLKQHTGDKTHACKVCSKPFPRKEQLVTHMRSHSCGDRPFSCGECGKSFPLKGNLLFHERSHNKGAGGAARQYRCDVCSKEFLCKAHLVAHRRTHSEGTDNSGSVDASSEIDDCSECTSKCEKSEAERPERKHEIRASTENRPTENNVAQTNAAVMQITNQVRSAPAPGATAAAAAPAFPHPAPHHPAAAIAHHPVTVNY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01071806;
90% Identity: -
80% Identity: -