Cpun005653.1
Basic Information
- Insect
- Conogethes punctiferalis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_031163375.1
- Location
- CM062081.1:16715763-16721889[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-52 1.9e-47 162.7 0.2 20 223 1 195 1 201 0.93 2 2 5.7e-13 1.6e-08 34.8 0.0 202 268 654 720 646 733 0.88
Sequence Information
- Coding Sequence
- ATGCGCGAGCTGGAGCGGCAGCAGCGCGAGCAGGAGGACCATGCCGACAAGGCGTACGACATGTACGCAGAGACGGTGGGGCGGCGCGGTGGGTCGCGGCTGGCGGCGCTCAGCCCCGCCGGCGTGCACTCGCCGCGGCGAAGCTCCGAAGACTCTGCCGACGACGGGTTCAATATTAAGGATCTCAGGCACGAGTTGAAAGAAGTGGAGGAGAAGTTCCGCAAGGCGATGATACTGAACGCGCAGCTGGACAACGATAAAGCTGCGCTCGGCTACCAGCTGGAGCTGCTCAAGGACCGGATAGAGGAGCTGCAGGAGGAGCACGCGCAGCTGACgCGCGAGCACAGGGAGAAGTGTTCGTCGCACGAGCGCCTGCGCCGCTCGCACCAGTCGCTGGAGCGCGAGCTGGGCTGCGCGCGCGACGCCGTGCGCGCGCGGGACGCCGCCGCCGACGCGGCCGGCTACGCCTTCGCCGAGGCCAAGGCGCCCGACGTGCCCGGCTTCGGCGCCGTGCCGCCGCTGGCGCTCGTGTCGCACCAGGCCGACCGCCTGCTGGGCCCGCAGGCCGACGGCACGCTGGGTGAGTACCTGCCGCGTTGTCTGCTGGGCCTGCTGCCGCCGCTACGCCTTCGCCGAGGCCAAGGCGCCCGACGTGCCCGGCTTCGGCGCCGTGCCGCCGCTGGCGCTCGTGTCGCACCAGGCCGACCGCCTGCTGGGCCCGCAGGCCGACGGCACGCTGGGCCGACCGCCTGCTGGGCCCGCAGGCCGACGGCACGCTGGGTGAGTACCTGCCGCGTTGTCTGCTGGGCCTGCTGCCGCCGCTACGCCTTCGCCGAGGCCAAGGCGCCCGACGTGCCCGGCTTCGGCGCCGTGCCGCCGCTGGCGCTCGTGTCGCACCAGGCCGACCGCCTGCTGGGCCCGCAGGCCGACGGCACGCTGGGTGAGTACCTGCCGCGTTGTCTGCTGGGCCTGCTGCCGCCGCTACGCCTTCGCCGAGGCCAAGGCGCCCGACGTGCCCGGCTTCGGCGCCGTGCCGCCGCTGGCGCTCGTGTCGCACCAGGCCGACCGCCTGCTGGGCCCGCAGGCCGACGGCACGCTGGGCCGACCGCCTGCTGGGCCCGCAGGCCGACGGCACGCTGGGTGAGTACCTGCCGCGTTGTCTGCTGGGCCTGCTGCCGCCGCTACGCCTTCGCCGAGGCCAAGGCGCCCGACGTGCCCGGCTTCGGCGCCGTGCCGCCGCTGACGCTCGTGTCGCACCAGGCCGACCGCCTGCTGGGCCCGCAGGCCGACGGCACGCTGGGTGAGTACCTGCCGCGTTGTCTGCTGGGCCTGCTGCCGCCGCTACGCCTTCGCCGAGGCCAAGGCGCCCGACGTGCCCGGCTTCGGCGCCGTGCCGCCGCTGGCGCTCGTGTCGCACCAGGCCGACCGCCTGCTGGGCCCGCAGGCCGACGGCACGCTGGGCCGACCGCCTGCTGGGCCCGCAGGCCGACGGCACGCTGGGTGAGTACCTGCCGCGTTGTCTGCTGGGCCTGCTGCCGCCGCTACGCCTTCGCCGAGGCCAAGGCGCCCGACGTGCCCGGCTTCGGCGCCGTGCCGCCGCTGGCGCTCGTGTCGCACCAGGCCGACCGCCTGCTGGGCCCGCAGGCCGACGGCACGCTGGGTGAGTACCTGCCGCGTTGTCTGCTGGGCCTGCTGCCGCCGCTACGCCTTCGCCGAGGCCAAGGCGCCCGACGTGCCCGGCTTCGGCGCCGTGCCGCCGCTGGCGCTCGTGTCGCACCAGGCCGACCGCCTGCTGGGCCCGCAGGCCGACGGCACGCTGGGCCGACCGCCTGCTGGGCCCGCAGGCCGACGGCACGCTGGGTGAGTACCTGCCGCGTTGTCTGCTGGGCCTGCTGCCGCCGCTACGCCTTCGCCGAGGCCAAGGCGCCCGACGTGCCCGGCTTCGGCACCGTGCCGCCGCTGGCGCTCGTGTCGCACCAGGCCGACCGCCTGCTGGGCCCGCAGGCTGACGGCACGCTGGACGTCCGGTTGCAGAAGCTGCTGAGCGCCAAGTCGGGCCTGGAGTCGGAGGTGCGCAAGCTGAAGCTGCAGCTGAACGACGAGCGCGCCGCGCGGCACAACGGCGTCGCCAGCCACAGCGACCACGACCTCGAGACAGAGCGTGAGTACACGGGCCTTAGTAGGGCCTGGAGTCGGAGGTGCGCAAGCTGA
- Protein Sequence
- MRELERQQREQEDHADKAYDMYAETVGRRGGSRLAALSPAGVHSPRRSSEDSADDGFNIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEHAQLTREHREKCSSHERLRRSHQSLERELGCARDAVRARDAAADAAGYAFAEAKAPDVPGFGAVPPLALVSHQADRLLGPQADGTLGEYLPRCLLGLLPPLRLRRGQGARRARLRRRAAAGARVAPGRPPAGPAGRRHAGPTACWARRPTARWVSTCRVVCWACCRRYAFAEAKAPDVPGFGAVPPLALVSHQADRLLGPQADGTLGEYLPRCLLGLLPPLRLRRGQGARRARLRRRAAAGARVAPGRPPAGPAGRRHAGPTACWARRPTARWVSTCRVVCWACCRRYAFAEAKAPDVPGFGAVPPLTLVSHQADRLLGPQADGTLGEYLPRCLLGLLPPLRLRRGQGARRARLRRRAAAGARVAPGRPPAGPAGRRHAGPTACWARRPTARWVSTCRVVCWACCRRYAFAEAKAPDVPGFGAVPPLALVSHQADRLLGPQADGTLGEYLPRCLLGLLPPLRLRRGQGARRARLRRRAAAGARVAPGRPPAGPAGRRHAGPTACWARRPTARWVSTCRVVCWACCRRYAFAEAKAPDVPGFGTVPPLALVSHQADRLLGPQADGTLDVRLQKLLSAKSGLESEVRKLKLQLNDERAARHNGVASHSDHDLETEREYTGLSRAWSRRCAS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -