Basic Information

Insect: Conistra vaccinii
Gene Symbol: L_1
Assembly: GCA_948150665.1
Location: OX411316.1:13337179-13358877[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.5e-06 0.00012 22.9 1.7 1 23 63 85 63 85 0.99

2 16 0.62 50 5.2 5.8 1 23 91 113 91 113 0.97

3 16 8.3e-06 0.00067 20.5 4.1 1 23 119 141 119 141 0.99

4 16 2.6e-05 0.0021 19.0 0.1 1 23 147 169 147 169 0.98

5 16 0.0012 0.095 13.8 0.0 2 23 185 207 184 207 0.94

6 16 5.9 4.7e+02 2.1 0.1 9 23 238 253 234 253 0.93

7 16 0.3 24 6.2 0.0 3 23 305 325 304 325 0.97

8 16 0.16 13 7.0 0.0 3 23 339 359 338 359 0.91

9 16 0.00054 0.043 14.8 0.3 1 23 367 390 367 390 0.95

10 16 0.096 7.7 7.7 0.0 1 23 395 418 395 418 0.92

11 16 0.013 1.1 10.4 0.1 1 23 479 503 479 504 0.94

12 16 0.0002 0.016 16.2 0.1 2 23 567 588 566 588 0.96

13 16 0.057 4.6 8.5 0.0 1 23 596 618 596 618 0.97

14 16 0.86 69 4.8 0.3 1 23 722 744 722 744 0.94

15 16 0.0034 0.27 12.3 0.1 1 20 752 771 752 774 0.95

16 16 0.15 12 7.1 0.3 1 23 781 803 781 803 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.5e-06	0.00012	22.9	1.7	1	23	63	85	63	85	0.99
2	16	0.62	50	5.2	5.8	1	23	91	113	91	113	0.97
3	16	8.3e-06	0.00067	20.5	4.1	1	23	119	141	119	141	0.99
4	16	2.6e-05	0.0021	19.0	0.1	1	23	147	169	147	169	0.98
5	16	0.0012	0.095	13.8	0.0	2	23	185	207	184	207	0.94
6	16	5.9	4.7e+02	2.1	0.1	9	23	238	253	234	253	0.93
7	16	0.3	24	6.2	0.0	3	23	305	325	304	325	0.97
8	16	0.16	13	7.0	0.0	3	23	339	359	338	359	0.91
9	16	0.00054	0.043	14.8	0.3	1	23	367	390	367	390	0.95
10	16	0.096	7.7	7.7	0.0	1	23	395	418	395	418	0.92
11	16	0.013	1.1	10.4	0.1	1	23	479	503	479	504	0.94
12	16	0.0002	0.016	16.2	0.1	2	23	567	588	566	588	0.96
13	16	0.057	4.6	8.5	0.0	1	23	596	618	596	618	0.97
14	16	0.86	69	4.8	0.3	1	23	722	744	722	744	0.94
15	16	0.0034	0.27	12.3	0.1	1	20	752	771	752	774	0.95
16	16	0.15	12	7.1	0.3	1	23	781	803	781	803	0.94

Sequence Information

Coding Sequence: ATGAAATTGTATCCACAACAGTTTAAGCTAGAGGCACTGGGCAGCGTGGGCAGCACGGCCGGCAGCTCTTGGCCATCCTCGACGCCGGAGCCGTCGCCGTCGCCGGCGTCCACGCCGACCTCGGCCGACGCCGCTGACGCCGAGGCCGAGCCGCCCTTCACGCTCGGCGCCACCGAGCACACCCCTTACCAGTGCCAGTTCTGCGATAAAGCCTTCCCCAGGCTCTCTTATCTCAAGAAACATGAACAGACGCATTCGGATCAGATGCCGTTTAGGTGTGAGTTCTGCTCGCGCCTGTTCAAGCACAAGCGATCTCGCGACCGCCACGTCAAGCTGCACACCGGAGACCGCAAGTACCGCTGCGCACATTGTGAATCTGCTTTCTCCAGGAGTGACCACTTGAAGATCCACATGAAGACGCACGACAATCAGAAGCCTTTCCAGTGTACCGTGTGCAACCGAGGGTACAACACTGCAGCCGCTTTGACTTCACACATGCAGGGACATAAGAGAGACCGCGAGGGTCGCGAGCCGGACAGGCGCAGGGCACTGCGCTGTCTGCGATGTGGAGATGCCTTCCGACGACCAGACCTGTTGCAGGCCCACATGGTGAGCGCACACGGCGTCGACACAGCAGCTATGACTCCCCCGCGACGCGTCGCTTCTCAGCCGCCGCCCACACTACTCGCTTGCATCTACTGTACTCGCGACACCTTCACCAGCATGGAACAGTTACAACTCCACGTGCGAGCAGCACACTCAGCGCTGCTAAATGGCGAAGGGCCAGTTCAAGTTGATCAGCCTTTGCCCACCGATCTAAGCCGACGGGCACCTGACGAAGTGCCTCCAGTCAAACGTCCTCGCTCCGGATCTGGCACGCCACAAACAACCTTATCCCCGAGCACACTTCTCTGCAATCAATGTGATGCTGCGCTCCCAGATTTTGAAGCATTTCGGGCTCATTTGAAAGGGCATATTGAAGAAGGAGGGGAGCTACGATCAAGTCCTGCGCCTTGCGTTCACTGTGGAGCTACGTTTGCGGATGCTGCGGCGTCTGAGCGTCACCTGACGGCACATTACTTGGCAGTGTCCTGCGAGTACACCTGCCACAGTTGCGCTCGAAGCTTCGCTGCTCCTGATGACTTACAGAAACATCTTCTTGAACTACACGCGCATCACTTGTATAGATGCGCTCTTTGTAAGGAGATTTTTGATTCAAAAGTTGCAATTCAGGTTCACTTCGCGGTAGCACATAGTGGTGAAAACAAAGTCTGGGTGTGTCGTTCTTGCGGAGCGGGTGCGGGCGCTCTGCGTTCGGAGGCTGAGGGCGCCGCTCACGTGCGTTCTCGACACGCGGCCGCAGCCCCACGATGTGCTTGCGGAGCCCTACTCGGCAGTGGGGTTGCTGCGAGGACCCCTCGACCACATCGCGCGTATCGGTGTCCCGTGCCTGCCTGCAATGATGCATTTGCTGTGCAGTACTTGCTCGAAAGACACATGCAGGCTCATCATGCAATGCAACAACAGGTTCTAAACGGAGAATTACCAAGAACAAAACGAATGGACTCCACCAACGGGGGCGAGGGCGGTGATGACGCACGATCTCCGTGTACCCCTGGCGCAGACAGTGCCGGCGTCACCACGGCCGTGGTCGCCGCGAGCGAGGAGCGCCGGCGGAAGAACGGGGCCGTCGCCTTGCAGTGTGCTTACTGTGGGGAGCGGACGCGGAGTCGGGCAGAGCTAGAGGCTCACACTCGAGCTCATTCAGGCGCCGCGGCTGCGAGACACAAGTGTCTCATCTGTGATGAGGTGCTGCCGTCTGCTGCAGTGTTGGCAGAGCATAAGCTCACACATTGCAAGGTGGTGTCAGGCGACACGTGCTCCCGCTGCCGCGCGCGCCTGCTGTCGGAGGAGTCGTTCCTGGCGCACATGGCGCGCCACCAGCCCGCGCTGCCGGCGCCCTGCGTGGTGTGCCGCCAGACGCTGGCGTCCGAGGCCGAGGCGCGCCTGCACGCGCGCTTCCACCTGCGGCCCGGGGAGGACGAGCAGAGATGCGCCATATGTCTCCGAGCGCTACCAGAGGGTGAGGCCGGCTCGGGCGCACGCGCGTGTTCGGCGTGCTACGCGCGCCACGCGGCCCCGCGCGCGCCTCCACCCGCGGACCACGACTGCCGCCTGTGTCGCCGCGCGCTCGGCTCGCCCACGCGCCTGCAGGCGCACCTCATCGAGCACACGTTCGCGGGCATCGGCGCCTTCACGTGCTACCTGTGTTCCGCCGTGTTCACGAGCGCCGCCGGCCTGCAGCGCCACCTGCCGGAGCACGCGGCTGCGCCGCGACCTTACGACTGTGCGAGATGCGGACTCAAGTTCTTCTTCCGAGCTGAGCTTGATAACCACGCCTTCGTGCATCTTGAAGAGGCAGAGATTGCGCAACGAGCTTTCTATGAGGCGTACGCTCGCGGTGCTGCGTCGGCGTGGGCCGCTCTGGCACCTCCGGAGCCTCGAACGAGTCCACCGCAAGCCGAAGTCAAGCGTGAGCCGGAGATCAAAGAGGAGCGAGGAACTGACGAGTATATAGAAGTGTCGTCCCCTCCCCCGGTGCCCCCTCCGCCCGCTCCCCCCGCCCCGCCCTCGCCCGCTCCTGTCGTGAAACAAGAGAAGCCTGACGAGGAGTAA
Protein Sequence: MKLYPQQFKLEALGSVGSTAGSSWPSSTPEPSPSPASTPTSADAADAEAEPPFTLGATEHTPYQCQFCDKAFPRLSYLKKHEQTHSDQMPFRCEFCSRLFKHKRSRDRHVKLHTGDRKYRCAHCESAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQGHKRDREGREPDRRRALRCLRCGDAFRRPDLLQAHMVSAHGVDTAAMTPPRRVASQPPPTLLACIYCTRDTFTSMEQLQLHVRAAHSALLNGEGPVQVDQPLPTDLSRRAPDEVPPVKRPRSGSGTPQTTLSPSTLLCNQCDAALPDFEAFRAHLKGHIEEGGELRSSPAPCVHCGATFADAAASERHLTAHYLAVSCEYTCHSCARSFAAPDDLQKHLLELHAHHLYRCALCKEIFDSKVAIQVHFAVAHSGENKVWVCRSCGAGAGALRSEAEGAAHVRSRHAAAAPRCACGALLGSGVAARTPRPHRAYRCPVPACNDAFAVQYLLERHMQAHHAMQQQVLNGELPRTKRMDSTNGGEGGDDARSPCTPGADSAGVTTAVVAASEERRRKNGAVALQCAYCGERTRSRAELEAHTRAHSGAAAARHKCLICDEVLPSAAVLAEHKLTHCKVVSGDTCSRCRARLLSEESFLAHMARHQPALPAPCVVCRQTLASEAEARLHARFHLRPGEDEQRCAICLRALPEGEAGSGARACSACYARHAAPRAPPPADHDCRLCRRALGSPTRLQAHLIEHTFAGIGAFTCYLCSAVFTSAAGLQRHLPEHAAAPRPYDCARCGLKFFFRAELDNHAFVHLEEAEIAQRAFYEAYARGAASAWAALAPPEPRTSPPQAEVKREPEIKEERGTDEYIEVSSPPPVPPPPAPPAPPSPAPVVKQEKPDEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00635642;
90% Identity: iTF_00822228;
80% Identity: -