Basic Information

Insect: Conistra vaccinii
Gene Symbol: Znf784
Assembly: GCA_948150665.1
Location: OX411323.1:21347164-21352031[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.8e-06 0.00014 22.6 1.6 1 23 17 39 17 39 0.97

2 14 0.0016 0.13 13.3 4.9 1 23 60 82 60 82 0.96

3 14 0.014 1.1 10.4 0.2 1 23 105 127 105 127 0.89

4 14 0.011 0.89 10.7 1.8 1 23 248 270 248 270 0.98

5 14 4.4e-06 0.00035 21.4 2.1 1 23 276 298 276 298 0.98

6 14 0.0028 0.23 12.6 0.8 1 23 305 327 305 327 0.91

7 14 5.9e-06 0.00048 21.0 4.8 1 23 333 355 333 355 0.98

8 14 8.7e-06 0.0007 20.5 2.3 1 23 361 383 361 383 0.97

9 14 0.00012 0.0093 16.9 1.2 1 23 389 411 389 411 0.96

10 14 6.1e-07 4.9e-05 24.1 2.1 1 23 417 439 417 439 0.97

11 14 4.2e-05 0.0034 18.3 0.7 1 23 446 469 446 469 0.98

12 14 0.011 0.89 10.7 7.6 1 23 480 503 480 503 0.96

13 14 0.0053 0.42 11.7 0.5 2 20 507 525 506 527 0.93

14 14 2 1.6e+02 3.6 1.9 2 11 531 540 530 552 0.74

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.8e-06	0.00014	22.6	1.6	1	23	17	39	17	39	0.97
2	14	0.0016	0.13	13.3	4.9	1	23	60	82	60	82	0.96
3	14	0.014	1.1	10.4	0.2	1	23	105	127	105	127	0.89
4	14	0.011	0.89	10.7	1.8	1	23	248	270	248	270	0.98
5	14	4.4e-06	0.00035	21.4	2.1	1	23	276	298	276	298	0.98
6	14	0.0028	0.23	12.6	0.8	1	23	305	327	305	327	0.91
7	14	5.9e-06	0.00048	21.0	4.8	1	23	333	355	333	355	0.98
8	14	8.7e-06	0.0007	20.5	2.3	1	23	361	383	361	383	0.97
9	14	0.00012	0.0093	16.9	1.2	1	23	389	411	389	411	0.96
10	14	6.1e-07	4.9e-05	24.1	2.1	1	23	417	439	417	439	0.97
11	14	4.2e-05	0.0034	18.3	0.7	1	23	446	469	446	469	0.98
12	14	0.011	0.89	10.7	7.6	1	23	480	503	480	503	0.96
13	14	0.0053	0.42	11.7	0.5	2	20	507	525	506	527	0.93
14	14	2	1.6e+02	3.6	1.9	2	11	531	540	530	552	0.74

Sequence Information

Coding Sequence: ATGAATCTAGGACCGGAATTGCTGGTCAAGCTAGAAAAACTTAATGTACACAAATGTGAAAAATGCCCAAAAGTCTTCCCGAATACGAGTGCCCTCATGAAACATATGTCTTATCATGAGGAATACTTCTTATCACATCTGGCTAGTGCATATGTATCTGTAGAAAGGGCCAGAATATTCAAATGTGACAAATGCACCAAAAGATTTGATAATAACAGACATTTTATGCTTCATAAGCTTGCACACATACAAGAGAATGTGAAAAATGAAAGAAAAATCAGCAAATTTCAGAACTATGATATTGATAAACCCTACAAATGTCCAGATTGCGATGTTAGTTATGCTGCACAAACTACTCTTGATGAACATTCTTTCCTTCACTTGCCATTCCCCCACATCTGTGAGTGTGGCATTGGATATTATGAGAAACAGGATTTGAAATGCCACATCAAATTAGTACATGGTTCGAAAATTAAAGTAGAGGCTACTTTGCCGCAAAATTTAGATCCAGAGGAGGACCAAGTTATGCCCCAAACAAAGCCTCAAGATAAATCCCAAAGAAAGTCTAAATCTAAGTCCAAGAAGGGGACAACAATAAAAGAAACCATAAAGAAGGAAAATCCTAACAAGAAGAAGTGGAAAGTTTCGCTGAAACATAAAGGTGCTAACAGCAATAAACAAAAAACGGAATGGAATATACCAGACCCAGATATAGATTTCAGAAAGACCTCCGATAATAAATATGAATGTCCTGAATGTAAGAAATTATTAAATTGCAAAAAAAATCTTATTATACATTACCGCATTCACTCTGGTGAGCGCCCCTACACTTGCCATTTATGTCCGAAGGCGTTCAACCAGTGGATCACACTAAAAAAACATACAGAGAGGCACATGGCCACAGAGAAGATCTATGTGTGTAATCATTGCCCTAAAGCTTTTACCCTGCCGTACTATAGGGATCGTCATGAAGTAATACACAGTGCGATTAAGGCTCATGAATGTCCGTATTGTCACAAGGGATTCCACGATCCGTCCGCATTGTTACGTCACAAACGAACACACACGGGAGACAAACGATACTGCTGCACGTACTGCCCTAAAACATTCAGTGACGTCAGTGGCCTCCGTGCCCATAAGCTACGTCATGAGAACAAAAAAGAGTTTGACTGTGAAATTTGCTATAAGAAGTTTTATAATCGAACTGATGTTAAGAAGCACATGGTGGTACACACTCATAAACGATGCTATGCTTGTGACTATTGCAAAAAATCTTTCACTTATAAATCTAATTTAATGATGCATGTACAGAGGCATATGATTTTAAAGAAACATTTCGTATGTGAGGAATGTAACATGCGGTTTCTCACAAAGGAGTATCTAAAAAGGCATATAATGACCGTGCACAAAAAAAATACACACAAACGCTTACTTGAATTTGAATGTAAGGATTGCTCGAAACAGTTCTATTATAAAAATAGTTTACATAGTCACTATCTGAGTTGCCATGCAAGTATACGTTGTGATGAATGCTCGCGGTATTTTGTAAGTGAAACCCATTTCGAGAGACACAAGCTGATTGAGAGTGTACAATGTGAAATATGTGACGAGAAATTTAATTGTGGAAATATGAAAGAGAAGCATTTTAAAGTTCATCTTCCCCAAAAAGTAAAAGAGATAAAAAGTGGTACAAATAGTCTGAAAGAAGTTTCGGAAATTTAA
Protein Sequence: MNLGPELLVKLEKLNVHKCEKCPKVFPNTSALMKHMSYHEEYFLSHLASAYVSVERARIFKCDKCTKRFDNNRHFMLHKLAHIQENVKNERKISKFQNYDIDKPYKCPDCDVSYAAQTTLDEHSFLHLPFPHICECGIGYYEKQDLKCHIKLVHGSKIKVEATLPQNLDPEEDQVMPQTKPQDKSQRKSKSKSKKGTTIKETIKKENPNKKKWKVSLKHKGANSNKQKTEWNIPDPDIDFRKTSDNKYECPECKKLLNCKKNLIIHYRIHSGERPYTCHLCPKAFNQWITLKKHTERHMATEKIYVCNHCPKAFTLPYYRDRHEVIHSAIKAHECPYCHKGFHDPSALLRHKRTHTGDKRYCCTYCPKTFSDVSGLRAHKLRHENKKEFDCEICYKKFYNRTDVKKHMVVHTHKRCYACDYCKKSFTYKSNLMMHVQRHMILKKHFVCEECNMRFLTKEYLKRHIMTVHKKNTHKRLLEFECKDCSKQFYYKNSLHSHYLSCHASIRCDECSRYFVSETHFERHKLIESVQCEICDEKFNCGNMKEKHFKVHLPQKVKEIKSGTNSLKEVSEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00173458;
90% Identity: -
80% Identity: -