Cvac019779.3
Basic Information
- Insect
- Conistra vaccinii
- Gene Symbol
- -
- Assembly
- GCA_948150665.1
- Location
- OX411342.1:8502133-8521569[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 35 0.12 9.4 7.5 3.5 1 23 242 265 242 265 0.91 2 35 1.1 85 4.5 0.2 2 23 291 313 290 313 0.95 3 35 0.51 41 5.5 0.7 1 23 378 400 378 400 0.94 4 35 0.0062 0.5 11.5 0.4 2 23 472 494 471 494 0.94 5 35 0.0088 0.7 11.0 1.7 2 23 500 522 499 522 0.94 6 35 0.017 1.3 10.1 0.8 1 23 527 550 527 550 0.96 7 35 0.71 57 5.0 0.1 2 23 553 575 552 575 0.92 8 35 0.11 9 7.5 2.2 2 21 582 601 581 602 0.93 9 35 0.017 1.3 10.1 0.3 1 23 661 684 661 684 0.91 10 35 0.13 10 7.4 0.2 3 23 713 734 711 734 0.92 11 35 0.027 2.2 9.5 0.4 2 23 757 780 756 780 0.95 12 35 1.4 1.1e+02 4.1 0.1 3 19 787 803 785 806 0.88 13 35 0.2 16 6.7 0.9 1 23 831 853 831 853 0.95 14 35 0.66 52 5.1 0.0 2 23 881 903 880 903 0.93 15 35 0.00021 0.016 16.1 0.4 2 23 924 946 923 946 0.96 16 35 0.00034 0.027 15.5 2.7 1 23 951 973 951 974 0.96 17 35 7.6e-05 0.0061 17.5 1.4 1 23 978 1001 978 1001 0.94 18 35 0.072 5.7 8.1 0.5 2 23 1004 1026 1003 1026 0.96 19 35 0.088 7.1 7.9 1.3 2 20 1032 1050 1031 1055 0.91 20 35 0.0041 0.33 12.1 2.6 2 23 1100 1122 1099 1122 0.94 21 35 3.7 3e+02 2.8 0.1 2 23 1151 1173 1150 1173 0.94 22 35 0.0059 0.47 11.6 0.0 1 23 1195 1218 1195 1218 0.91 23 35 0.00025 0.02 15.9 0.7 1 23 1223 1246 1223 1246 0.95 24 35 0.00012 0.0093 16.9 0.5 1 23 1252 1275 1252 1275 0.96 25 35 0.0041 0.33 12.1 3.2 1 23 1312 1334 1312 1334 0.96 26 35 0.022 1.8 9.7 0.3 1 23 1394 1417 1394 1417 0.92 27 35 0.029 2.3 9.4 0.3 3 23 1449 1470 1447 1470 0.94 28 35 0.018 1.5 10.0 2.3 2 23 1493 1514 1493 1515 0.95 29 35 0.0014 0.11 13.5 1.7 1 23 1520 1543 1520 1543 0.97 30 35 0.086 6.9 7.9 0.2 1 23 1548 1571 1548 1571 0.93 31 35 0.0028 0.22 12.6 0.7 2 23 1577 1599 1576 1599 0.92 32 35 0.0019 0.15 13.1 0.2 2 23 1607 1629 1606 1629 0.97 33 35 0.3 24 6.2 0.0 2 23 1636 1657 1635 1657 0.95 34 35 6.1e-06 0.00049 20.9 0.6 1 23 1663 1685 1663 1685 0.92 35 35 6.8e-06 0.00055 20.8 1.2 1 23 1691 1714 1691 1714 0.97
Sequence Information
- Coding Sequence
- ATGGAGTTCGACGAGATTGTGGTGAAGGAGAGCCCCGGGCTGTGCCGGTGCTGTCTCTCCGAAGGATGCTACAAGGATTTGGGCACCGAATATACTTGGATGAATGAAACCGAGGTTTATGCAGATATGCTGCTCGAATGCTTCGATATTAGTATAACCCAACACAATGAAGGTCCAAATGGTCCAAACCGGCTCATCTGTGAGGTATGCATCACTAGGCTGCGGGACGCTTGCAACTTCAAGAAACAAGTTATGGACTCGGAGAAGAAATTCATTGATATGATGGGCAGGGGAGAATTTAGACCTAAAATGCTTATCTACCAGACACAGCTGAAGTGTGAGGGTCCATCTGCGGTGGAGGACCCTGATGATGCAGACGTTGAATATCTTGAAGATGATCTTGATTTCGGTGAGGTAGACCTCAAAGACGAATTGGTACAGCCTTCAGTATCGGATGTCACCGTATCCACGCTGCCGGTCAAAGGCAAGCGCGGTCGTCCTCGCAAGAACACACCAGTGAAGCCCGATAAGAGGGCCAAAGTGGCTAAAGTCGACGATAAGACCAAGACGAGAGCTGTTGCTAAAGGTGAGAAACGGCGCACCACAGAGGCGTCGAGTAAGTCCTCAATGACGTCCACAAGACGCAACAAACTAATGAAGACTAACGCTATTATAGTTCTAGAAACATCCACCGTCATCCCCTTCAAATGGCATAGACAAAATTACCTCTGTTTCTTCTGCCATCTGACTTTCAAAGACACTGATTTACTCAAAGAACATACTACAAATCAGCATAAGAAATCAAATGTCAAAGCTGCTGTTTCATATTTGAGAAGAGACGAGAAAGTTAAAATTGACGTCTCCGTGTTAGAATGTCGTTCTTGCAATGATAAATTCGACGATCTAAACGCTCTCATAGAACATTTAAAGAGTACACATAACCTTAAATTCACAGAAGAATGTGGTTACGGACTCATACCGTACTTCCTACAAAACGAGGTCTATAATTGCGCTGTTTGTAAAAAACCGAGGAAATACAAGGGCACAGAGTCTTCCTCGATGAGAAGGCGACGGAATCTACAAATTCTATTCAACAATACATCTATTATTCCCTTTAAATGGCGTGGGAAGTACTTGTGTTTCTATTGCAGCAAAGATATTGCCGAGTATACAGAGTTAAGGAAACATACGAAAGCACATGGCAGCTGTTCCATAAAAGACCATTCTCTCAAAGTCCTAAAAGGAGGACAGAACATGGAAATAAAAGTAGACATATCATTGATTAATTGTGAAGTGTGCGCAGAAACATTACCGTCTTTCGATGAAATAATCGCTCATTTGTTTGACAAACATGAACTTGAGTACGATAAAGGAGTAGAAATGGCTATAGAGGAGTATAAACTTGCTGATCTCAGTTGCACCGGATGCGATGAAAAGTTCACGTATTTCGGCTACCTAGTGTCTCACGTCAATAATACCCACCCGAAAAATTGCCTCATTTGCGATAACTGCAACCAAAAATTCAACAAAAGGAGAGATTTGTTTTCACACGTTAAAAATTACCATCGAGAAGGAGGATATCAATGCGAAATGTGCCCTCAAATCTTCAACTCATTGAATATCCTAAGAAAACATCGAAATAATAGGCATTTGACTCGATGCAATATTTGCAATTTAAAACTGCCGTCAGCTGCTTTGAGACAAAAACATATCGACTTAGAACATCCCGACGACGGGTCTTTGCAGTGCGATACCTGCTTCAAAGAGTTCCACACGAAACAGGGCCTAAAAATGCATTCAAGAAAATGTAAAGGAGAAGAAATTTTCGGAATCGCCATCAAAGAAGAAAATATTGCCATGGACTTAGATCTCAACTACGAGGATCAAGCCAAAAAACCTTGCGTCAAACAAATACGAGAAAATATAGTTATAGTCATAAACATGTCTACGGCAATACCCTTTAACTTTTATAAGAATAAGTTCAACTGCTTTTACTGCTCCAAAGATTTCGCCGATTCTGATTTGATGAGAGAACACGCGGTTATGGAACATCCTGTTTGCGATGTTAAAGAAAAGTGTATTAGGAAATGTAGGGAGTCAGTCGCTTGCGTCAAAATCGATATTTCTTCACTCGCTTGCAAAGTCTGCTTCGAGTCATTGAATGACTTGGATCATTTAATCGATCACCTAATCGCGAAACACGATGCGAAATACGACAAATCGATAACAACGTGTCTACAGCCCTACAGGCTGGTGAAAGACAACATGGTCTGTCCTCACTGTCCAGGCGAAGTATTCCGCTTCTTCGGAACACTTCTTAAACATATGAACATCAAACATACCAACAACAATATCATTTGCGTTTACTGCGGCCAAACATTCCATTTGGAAACAGAGGTGACAAAGCACAGTGCTAGTTATCTAAGGAGGAGAAATCTACAAATATTACTCAACAATACAACATTGATACCTTTTAAATGGCGAGGCAAATACCTCTGCTTTTATTGCGGTGACGATACGAAGACGCCCGATCGTCTCCGGAAACACACGAAAGGCCACGGTCCTTGCAGTGATAGCGACAGAGCTATAAGACTAGTTAAATCAGCTGATATAGAAATCAAAATAGACGTTTCCGATGTCTCCTGCGAGATTTGTTCAGAAAGGTTCCCATTTTTAAACGAAATTATTGATCATTTGATAGTTAAACATCAACTGCCTTATGCGAAAGATGTGGAGATGCTGTTATCAGCCTACAGGCTGTTAGATCTTCAGTGTCTCCTTTGCGATAAAACCTTCAATTACTTACGTAAATTAATCAGCCATATGAACGTCGTTCATCCAAATAACAGCTTTGAGTGTGCCGAATGTAAAAAGAACTTTAATAAAAAGAGAGATTTGGATTCGCACATAAGATTACATCACAAGAAGTACCATTCTTGTACTAAATGCGATGAAACGTTCCCAACTAACTCCGAGTTACAGATGCATAGGTCTAACGCTCATTCGTCGACGTGTAACATCTGCTTCCAAGTATTTGCGTCAGACAGCAAGCGGTTAGCTCATCAGAAATCTGACCATGATTCTAATCAGAGCCAATGTGGATTTTGCAACAAAGTTTTGACAACAAAACAAGCCTTTATAAGACATGCTGCAAATTGCGAACATAAACCTCAAGAAGAAATTGTCATAATAGATGACGAAGACAAAAAAGTATCCGTTAAAGAAATAAGAAAAAGTTTAGCATGCATCTTTAACATGACTACCGCACTACCTTTCAAATTCTTTATGAATAGGTTACGATGTTTTTATTGCACGAAAGACTTCACCTCATGCGAAGATTTAAAAGAACATACGTCGATAGAACACCCTCACTGCGATATATCCTTTAAGTCTATGAGGTTAAGGAACAGATATGACGGTGTCCAAATCAAAGTTGATACTTCTTCTTTGTCTTGTAGACTATGCCAAGTCACCTTGCAGGATTTGAACGACTTGATTGATCATTTGAGCAAAGAGCATAAGGTGAAATGCGACTTTTCTGTCGAGAGTAATCTGCAACCGTTCAAACTGATTAAAGACAACTACCCCTGCCCTATTTGCGGGGAAGTCTACAGATATTTTGGCGTCTTACTCAAGCACGTCAGTGCGTCTCATAGCGGCAATAAACATATATGCATGTACTGCGGTACAGCGTTCAGAACTGACCCTAATCTTAGAGCTCATATTTCAAGACGTCATAAAATCGCTGACAACCACAAGTGCGGTAATTGCGATCTAGTATTTGGGACTAATAGTGCGTTAAGAAATCATCAAGGCACCGTTCACGATGGTCTGCCAGGGCCGTACGAAGGCTGTACCTCTGAGAGACGACGGAAAAACTTGAAAATACTGTTCAACAACACTACGATCATGCCATTTAAATGGCGGGGCAAATACCTGTGCTTTTACTGCGGAAAAAACTATACAGAATACACAGAATTTAGAAAGCATACAAAATCCCACGGTCTGTGCACCACAAAAGATTACTCTCTTAAACTAATCAAAGGTTCAAAATTCAATACAGTGGAGGACAAATATAAGAAAATGGAAGTCGCCCGTAAGCTATTGATAAAACGGCGGAATGTCGAGTATGTTTTACAGTATAGCAACGTCACACCTTTCATGTGGCATAAGGGGAAATATAAATGCTTTTACTGCAACGAAACTACTAAAGACCCAGTCGTTCTACGAGAGCATACAACCGCAGCTCATCAATTCGCGAATCTCGAACTCGTTGTGTTTGACAGAACCAAAAATAACCGAAATAAAGACGCTGCTGTCAAAATTGACGTTACTAATATATGTTGCAAGCTTTGTCCACAAGCTGTGACTAATTTAGAAGAGCTGATCCACCATTTAATCATTGCACATGACGCAGAATACGATGTAAGCGTCCCAAATTGCCTGCTACCCTTTAAATTAGACAAGGACCAGCCCACGTGTCCAACATGCAACATGAAATTCGTCTTCTTCGAATATCTGTTGCGCCACGCGAACAAACATCACCTATCCCACCATTACATTTGCGATGTCTGTGGCACCAGTTTTCAAGGAGAGAACCATTTGAAAATGCACTATAGGTACTATCATAGAGAGGGTGGTTACACTTGCGAATACTGTGGTATCAGTCTTGCTACTCTATCTAAAAAGATTCTACACGAAAAGAACGTGCATTTAGTCAACTTATCGACCTGCCCACATTGTCCGGAAACTTTCAAAAGTCCTTACTTAAAGAAACTTCATTTGGCGAATGTCCATGAGGTCGAAGAGCTCAAAATTAAGTGCCCATTTTGCCCAAAAGTTTATCCGCAGGAATCTATCATGTCGCGTCATATGAGGAGAGTGCATCTGAGAGAGAAGAATGTAGAATGCGAAGTCTGTGGGGACAAATTCTTCGGTCCTTACGATGTTAAACTACATATGGTAAAACATAATGGCGAAAAAAAATTCGTCTGCTCTGTTTGCGGGAAAAAATTCTCCAAGCGAAGTAATTTGAACTCCCATGCCGTATTACATACAAAAGAAAAGGACTACGTATGTGTCGTTTGCAATAAGGCATTTGCGCACCAAACGAATTTGCGTATGCATATCCGCAATAGACATAGTCGGTTTGACCTAGCACCTATCGTTGATGAAATCGATGAAAGCGATATGGTTCAAATGGAAATCATTCAAGAGGAATTAGAAGGCGAAGTGGCGGGACAATACATTCAATGA
- Protein Sequence
- MEFDEIVVKESPGLCRCCLSEGCYKDLGTEYTWMNETEVYADMLLECFDISITQHNEGPNGPNRLICEVCITRLRDACNFKKQVMDSEKKFIDMMGRGEFRPKMLIYQTQLKCEGPSAVEDPDDADVEYLEDDLDFGEVDLKDELVQPSVSDVTVSTLPVKGKRGRPRKNTPVKPDKRAKVAKVDDKTKTRAVAKGEKRRTTEASSKSSMTSTRRNKLMKTNAIIVLETSTVIPFKWHRQNYLCFFCHLTFKDTDLLKEHTTNQHKKSNVKAAVSYLRRDEKVKIDVSVLECRSCNDKFDDLNALIEHLKSTHNLKFTEECGYGLIPYFLQNEVYNCAVCKKPRKYKGTESSSMRRRRNLQILFNNTSIIPFKWRGKYLCFYCSKDIAEYTELRKHTKAHGSCSIKDHSLKVLKGGQNMEIKVDISLINCEVCAETLPSFDEIIAHLFDKHELEYDKGVEMAIEEYKLADLSCTGCDEKFTYFGYLVSHVNNTHPKNCLICDNCNQKFNKRRDLFSHVKNYHREGGYQCEMCPQIFNSLNILRKHRNNRHLTRCNICNLKLPSAALRQKHIDLEHPDDGSLQCDTCFKEFHTKQGLKMHSRKCKGEEIFGIAIKEENIAMDLDLNYEDQAKKPCVKQIRENIVIVINMSTAIPFNFYKNKFNCFYCSKDFADSDLMREHAVMEHPVCDVKEKCIRKCRESVACVKIDISSLACKVCFESLNDLDHLIDHLIAKHDAKYDKSITTCLQPYRLVKDNMVCPHCPGEVFRFFGTLLKHMNIKHTNNNIICVYCGQTFHLETEVTKHSASYLRRRNLQILLNNTTLIPFKWRGKYLCFYCGDDTKTPDRLRKHTKGHGPCSDSDRAIRLVKSADIEIKIDVSDVSCEICSERFPFLNEIIDHLIVKHQLPYAKDVEMLLSAYRLLDLQCLLCDKTFNYLRKLISHMNVVHPNNSFECAECKKNFNKKRDLDSHIRLHHKKYHSCTKCDETFPTNSELQMHRSNAHSSTCNICFQVFASDSKRLAHQKSDHDSNQSQCGFCNKVLTTKQAFIRHAANCEHKPQEEIVIIDDEDKKVSVKEIRKSLACIFNMTTALPFKFFMNRLRCFYCTKDFTSCEDLKEHTSIEHPHCDISFKSMRLRNRYDGVQIKVDTSSLSCRLCQVTLQDLNDLIDHLSKEHKVKCDFSVESNLQPFKLIKDNYPCPICGEVYRYFGVLLKHVSASHSGNKHICMYCGTAFRTDPNLRAHISRRHKIADNHKCGNCDLVFGTNSALRNHQGTVHDGLPGPYEGCTSERRRKNLKILFNNTTIMPFKWRGKYLCFYCGKNYTEYTEFRKHTKSHGLCTTKDYSLKLIKGSKFNTVEDKYKKMEVARKLLIKRRNVEYVLQYSNVTPFMWHKGKYKCFYCNETTKDPVVLREHTTAAHQFANLELVVFDRTKNNRNKDAAVKIDVTNICCKLCPQAVTNLEELIHHLIIAHDAEYDVSVPNCLLPFKLDKDQPTCPTCNMKFVFFEYLLRHANKHHLSHHYICDVCGTSFQGENHLKMHYRYYHREGGYTCEYCGISLATLSKKILHEKNVHLVNLSTCPHCPETFKSPYLKKLHLANVHEVEELKIKCPFCPKVYPQESIMSRHMRRVHLREKNVECEVCGDKFFGPYDVKLHMVKHNGEKKFVCSVCGKKFSKRSNLNSHAVLHTKEKDYVCVVCNKAFAHQTNLRMHIRNRHSRFDLAPIVDEIDESDMVQMEIIQEELEGEVAGQYIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00038040;
- 90% Identity
- iTF_00038040;
- 80% Identity
- -