Basic Information

Insect: Agrochola lota
Gene Symbol: -
Assembly: GCA_947364205.1
Location: OX376247.1:6154342-6174758[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 34 0.11 8.5 7.5 3.5 1 23 243 266 243 266 0.91

2 34 1.9 1.4e+02 3.7 0.2 2 23 292 314 291 314 0.94

3 34 0.037 2.8 9.0 0.9 1 23 336 358 336 358 0.97

4 34 0.49 37 5.5 0.7 1 23 398 420 398 420 0.94

5 34 0.0059 0.45 11.5 0.4 2 23 492 514 491 514 0.94

6 34 0.0081 0.61 11.1 1.7 2 23 520 542 519 542 0.94

7 34 0.016 1.2 10.2 0.8 1 23 547 570 547 570 0.96

8 34 0.67 51 5.1 0.1 2 23 573 595 572 595 0.92

9 34 0.11 8.1 7.6 2.2 2 21 602 621 601 622 0.93

10 34 0.016 1.2 10.2 0.3 1 23 681 704 681 704 0.91

11 34 0.056 4.2 8.5 0.2 3 23 733 754 731 754 0.92

12 34 0.19 15 6.8 0.9 1 23 819 841 819 841 0.95

13 34 0.31 23 6.1 0.1 2 23 869 891 868 892 0.93

14 34 0.00023 0.018 16.0 0.7 2 23 912 934 911 934 0.96

15 34 0.00032 0.024 15.5 2.7 1 23 939 961 939 962 0.96

16 34 0.00043 0.033 15.1 2.3 1 23 966 989 966 989 0.94

17 34 0.11 8.1 7.6 0.6 2 23 992 1014 991 1014 0.96

18 34 0.047 3.6 8.7 0.1 2 19 1020 1037 1019 1040 0.94

19 34 0.0039 0.3 12.1 2.6 2 23 1088 1110 1087 1110 0.94

20 34 10 7.6e+02 1.4 0.1 2 23 1139 1161 1138 1161 0.93

21 34 0.0056 0.43 11.6 0.1 1 23 1183 1206 1183 1206 0.91

22 34 4.6e-05 0.0035 18.2 0.9 1 23 1211 1234 1211 1234 0.95

23 34 0.00042 0.032 15.2 0.2 1 22 1240 1261 1240 1263 0.90

24 34 0.00024 0.019 15.9 1.0 2 23 1269 1291 1268 1291 0.97

25 34 0.0028 0.21 12.6 0.5 1 23 1337 1360 1337 1360 0.93

26 34 0.027 2.1 9.5 0.3 3 23 1392 1413 1390 1413 0.94

27 34 0.018 1.3 10.1 2.3 2 23 1436 1457 1436 1458 0.95

28 34 0.0014 0.1 13.6 1.7 1 23 1463 1486 1463 1486 0.97

29 34 0.082 6.2 7.9 0.2 1 23 1491 1514 1491 1514 0.93

30 34 0.0027 0.2 12.6 0.7 2 23 1520 1542 1519 1542 0.92

31 34 0.0018 0.14 13.1 0.2 2 23 1550 1572 1549 1572 0.97

32 34 0.28 21 6.3 0.0 2 23 1579 1600 1578 1600 0.95

33 34 5.8e-06 0.00044 21.0 0.6 1 23 1606 1628 1606 1628 0.92

34 34 1.2e-05 0.00089 20.0 1.2 1 23 1634 1657 1634 1657 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	34	0.11	8.5	7.5	3.5	1	23	243	266	243	266	0.91
2	34	1.9	1.4e+02	3.7	0.2	2	23	292	314	291	314	0.94
3	34	0.037	2.8	9.0	0.9	1	23	336	358	336	358	0.97
4	34	0.49	37	5.5	0.7	1	23	398	420	398	420	0.94
5	34	0.0059	0.45	11.5	0.4	2	23	492	514	491	514	0.94
6	34	0.0081	0.61	11.1	1.7	2	23	520	542	519	542	0.94
7	34	0.016	1.2	10.2	0.8	1	23	547	570	547	570	0.96
8	34	0.67	51	5.1	0.1	2	23	573	595	572	595	0.92
9	34	0.11	8.1	7.6	2.2	2	21	602	621	601	622	0.93
10	34	0.016	1.2	10.2	0.3	1	23	681	704	681	704	0.91
11	34	0.056	4.2	8.5	0.2	3	23	733	754	731	754	0.92
12	34	0.19	15	6.8	0.9	1	23	819	841	819	841	0.95
13	34	0.31	23	6.1	0.1	2	23	869	891	868	892	0.93
14	34	0.00023	0.018	16.0	0.7	2	23	912	934	911	934	0.96
15	34	0.00032	0.024	15.5	2.7	1	23	939	961	939	962	0.96
16	34	0.00043	0.033	15.1	2.3	1	23	966	989	966	989	0.94
17	34	0.11	8.1	7.6	0.6	2	23	992	1014	991	1014	0.96
18	34	0.047	3.6	8.7	0.1	2	19	1020	1037	1019	1040	0.94
19	34	0.0039	0.3	12.1	2.6	2	23	1088	1110	1087	1110	0.94
20	34	10	7.6e+02	1.4	0.1	2	23	1139	1161	1138	1161	0.93
21	34	0.0056	0.43	11.6	0.1	1	23	1183	1206	1183	1206	0.91
22	34	4.6e-05	0.0035	18.2	0.9	1	23	1211	1234	1211	1234	0.95
23	34	0.00042	0.032	15.2	0.2	1	22	1240	1261	1240	1263	0.90
24	34	0.00024	0.019	15.9	1.0	2	23	1269	1291	1268	1291	0.97
25	34	0.0028	0.21	12.6	0.5	1	23	1337	1360	1337	1360	0.93
26	34	0.027	2.1	9.5	0.3	3	23	1392	1413	1390	1413	0.94
27	34	0.018	1.3	10.1	2.3	2	23	1436	1457	1436	1458	0.95
28	34	0.0014	0.1	13.6	1.7	1	23	1463	1486	1463	1486	0.97
29	34	0.082	6.2	7.9	0.2	1	23	1491	1514	1491	1514	0.93
30	34	0.0027	0.2	12.6	0.7	2	23	1520	1542	1519	1542	0.92
31	34	0.0018	0.14	13.1	0.2	2	23	1550	1572	1549	1572	0.97
32	34	0.28	21	6.3	0.0	2	23	1579	1600	1578	1600	0.95
33	34	5.8e-06	0.00044	21.0	0.6	1	23	1606	1628	1606	1628	0.92
34	34	1.2e-05	0.00089	20.0	1.2	1	23	1634	1657	1634	1657	0.97

Sequence Information

Coding Sequence: ATGGAGTTCGACGAGATTGTGGTGAAGGAGAGCCCCGGGCTTTGCCGGTGCTGTCTCTCTGAAGGATGCTACAAGGATTTGGGTACCGAATATACCTGGATGAATGAAACCGAGGTTTACGCTGATATGCTGCTCGAATGCTTCGATATTAGTATAACCCAACACAATGAAGGTCCAAATGGTCCTAACCGGCTCATCTGTGAGGTCTGCATTACTCGTCTGCGGGACGCTTGCAACTTCAAGAAACAAGTCATGGACTCGGAGAAGAAATTCATTGATATGATGGGCAGGGGAGAATTTAGACCTAAGATGCTTATCTACCAGGCACAGCTGAAGTGTGAGGGTCCATCTGCGGTGGAGGAGCCTGATGATGCAGATGTTGAATATCTTGAAGATGATCTTGATTTTGGTGAAGTCGACCTCAAAGACGAATTAATACAGCCTTCAGTATCGGACGTCACCGTAACTACTCTGCCGGTCAAAGGCAAGCGCGGTCGTCCTCGCAAGAACACACCAGTGAAGCCGGATAAGAGGGCCAAAGTGGCTAAAGTCGACGATAAGGCCAAGACATCGAAAGCTGTGGCTAAAGGTGAGAAACGGCGCACCACAGAGGCGTCGAGTAAGTCCTCAATGACGTCCACAAGACACAACAAATTAATGAAGACTAACGCTATTATAGTTCTAGAAACTTCCACCGTCATCCCCTTTAAATGGCATAGACAAAATTACCTCTGCTTCTTCTGCCATCTGACTTTCAAAGACACTGATTTACTCAAAGAACATACTACAAACCAGCACAAGAAATCTAATATCAAAGCTGCTGTTTCATACTTAAGAAGAGACGAGAAAGTTAAAATTGACGTCTCCGTGTTAGAATGTCGGTCTTGCAATGATAAATTCGACGATCTCAACGCTCTCATAGAACATCTAAAATATACACATAACATTAAATTTACAGAAGAATGTGGTTATGGTCTCATACCGTACTTCCTACAAAACGAGGTCTACAATTGCGCTGTTTGCAAAgaagaattccaatactttatgaaattgaatcagcacatgaatgaacactacgGTAAAAAACCGAGGAAATACAAGGGCACAGAGTCTTCCTCGATGAGAAGGCGACGGAACCTACAAATTCTATTCAACAATACATCTATTATTCCTTTTAAATGGCGTGGGAAGTACCTGTGTTTCTACTGCAGTAAAGATATTGCCGAGTATACAGAGTTAAGGAAACATACGAAAGCACATGGCAGTTGTTCCATAAAAGACCATTCTCTCAAAGTCCTAAAAGGAGGACAGAACATGGAAATTAAAGTAGACATATCATTGATTAATTGCCAGGTGTGTGCGGAAACATTACCGTCTTTCGAGGAAATAGTCGCTCATTTGTTTGACAAACATGAACTTGAATACGATAAAGGAGTAGAAATGGCTATAGAAGAGTATAAACTTGCTGATCTGAGCTGCACGGGATGCGATGAAAAGTTCACGTATTTCGGCTATCTAGTATCTCACGTCAATAATACCCACCCGAAGAACTGCCTCATTTGCGAGAACTGCAACCAAAAATTCAATAAAAGGAGAGATCTGTTTTCTCACGTGAAAAATTACCATCGAGAAGGAGGGTACCAATGCGAAATGTGCCCTCAAATCTTCAACTCATTGAATATCCTAAGAAAACATCGAAATAACAGGCATTTGACACGATGCAACATTTGCAATTTGAAACTGCCATCAGCTGCTTTGAGACAAAAACATATCGACTTGGAACATCCGGACGACGGCTCTTTGCAATGCGATACCTGCTTCAAAGAGTTCCACACGAAGCAAGGCCTAAAAATGCATTCAAGAAAATGTAAAGGAGAAGAAATTTTCGGAATCGCCATCAAAGAAGAAAATATTGCCATGGACTTAGATCTCAACTACGAGGATCAAGCCAAAAAACCTTGCGTCAAACAAATCAGAGAAAATATAGTTATAGTCATAAACATGTCTACGGCAATACCGTTTAATTTTTATAAGAACAAGTTCAACTGCTTTTACTGCTCCAAAGATTTTGCCGATTCAGATTTAATGAGGGAACACGCGGTTATGGAACATCCGGTGTGCGATGTTAAAGAAAAGTGTATTAGGAAATGTAGGGAGTCTGTCGCTTGCGTCAAAATCGATATTTCTTCACTCGCTTGCAAAGTCTGCTTCGAGTCATTGACTGACTTGGACCATTTGATCGATCACTTAATCGCAAAACACGATGCGAAATACGACAAATCGATAACGACGTGTTTACAACCTTATAGGCTGATCAAAGACAACATGGTCTGTCCACACTGCCCAGATTTGGAAACAGAGGTGACAAAGCACAGTGCTAGTTATCTAAGGAGGAGAAATCTGCAAATATTGCTCAACAATACAACATTGATACCTTTTAAATGGCGCGGCAAATACCTCTGCTTTTATTGCGGGGACGATACCAAGACGCCCGATCGTCTCCGGAAACACACGAAAGGCCACGGTCCTTGCAGTGAAAGCGACAGAGCTATCAGACTAGTTAAATCAGCTGATATAGAAATCAAAATAGACGTTTCCGATGTCTCCTGCGAGATTTGTTCAGAAAGTTTCCCATTTTTAAACGAAATTATTGACCATTTGATAATTAAACACCATCTGCCTTATGCGAAAGATGTAGAGATGCTGTTATCAGCCTACAGGCTGTTAGATCTTCAGTGTCTCCTTTGCGATAAAACCTTCAATTACTTACGTAAATTAATCAGCCACATGAACGTTTCTCATCCAAATAACAGCTTTGAGTGTGCCGAATGTAAAAAGAACTTTAATAAAAAGAGAGATTTGGACTCTCACATAAGATTACATCATAAGAAGAACCATTCTTGTACCAAATGCGATGAAACGTTCCCAACTAACTCTGCGTTACACATTCATAGGTCTAACGCTCATTCGTCGACGTGTAACATCTGCTTCCAAGTATTTGCGTCAGACAGCAAGCGATTAGTTCATCAAAAATCTGACCATGATTCTAATCATAGCCAATGTGGATTTTGCAATAAAGTTCTAACAACAAAACAAGCCTTTATAAGACATGCTGCAAATTGCGAACAAAAACCTCAGGAAGAAATTGTCATAATAGATGACGAAGACAAAAAAGTATCCGTTAAAGAAATAAGAAAAAGTTTAGCATGTATCTTTAACATGACTACCGCACTACCTTTCAAATTCTTTATGAATAGATTACGTTGTTTCTATTGCACGAAAGACTTCACCTCATGCGAAGATTTAAAAGAACATACGTCGATAGAACATCCTTACTGCGATATATCCTTTAAATCTATGAGGTTAAGGAACAGATATGACGGTGTCCAAATCAAAGTCGATACATCTTCTTTGTCTTGTAGACTATGCCAAGTCCCCTTGCAGGATTTGAACGATTTGATTGACCATTTGAGCAAAGAGCATAAGGTGAAATGCGACTTTTCTGTCGAGAGTAATCTGCAGCCGTTCAAACTGATTAAAGACAACTACCCTTGCCCTATTTGCGGGGAAGTTTACAGATATTTTGGCGTCTTACTCAAGCACGTCAGTGCGTTTCATAGCGGCAATAAACATATATGCATGTATTGCGGCAAAGCGTTCAGAACTGACCCTAATCTTAGAGCTCATATATCAAGACGTCATAAAATCGCTGATAATCACAAGTGCGGAAATTGTGATCTAGTTTTTGGGACCAATAGTGCGTTAAGAAATCATCAAGGCGCCGTTCACGGTACAAAATTAGTTCAATGCTTCGAATGCTCAGAAAAATTCACCTCACAATATTCAATGCAACGCCACTTGATCACGTCTCACGGTTCAAAATTCAATACTGTGGAGGACAAATATAAGAAAATGGAAGTCGCCCGTAAGCTATTGATAAAACGGCGGAATGTCGAGTATGTTTTACAATATAGCAATGTCACACCTTTCATGTGGCATAAGGGGAAATATAAATGCTTTTACTGCAACGAAACTACAAAAGACCCAGTTCTTCTACGAGAGCATACGACCGAAGCTCATCAATTCGCGAACCTCGAACTCGTTGTATTCGACAGAACCAAAAATAACAGAAATAAAGACGCCGCAGTCAAAATTGACGTCACTAATATATGTTGCAAGCTTTGTCCGCAAGCTGTGACTAACTTAGAAGAGCTGATACATCATTTAATCATCGCACATGACGCAGAATACGATGTAAGCGTTCCAAATTGCCTGCTACCCTTTAAATTAGACAAGGACCAGCCCACATGTCCAACATGCAACATGAAATTCGTCTTCTTCGAATATCTGTTGCGCCACGCGAACAAACATCATCTTTCCCACCATTACATCTGCGATGTTTGTGGCACCAGTTTCCAAGGAGAGAACCATTTGAAAATGCATTATAGGTACTATCATAGAGAGGGTGGTTACACTTGCGAATACTGTGGTATCAGTCTTGCTACTTTATCTAAAAAGATTCTACACGAAAAGAACGTGCACTTAGTCAACTTATCGACCTGTCCACATTGTCCGGAAACTTTCAAAAGTCCTTACTTAAAGAAACTTCATTTGGCGAACGTTCACGAGGTCGAAGAGCTCAAAATTAAGTGCCCATTTTGCCCAAAAGTGTATCCACAGGAATCTATCATGTCGCGTcatatgaggagagtgcatctaagagagaagaatgtagaatgtgaagtctgtggggacaaattcttcggtccttacgatgttaaacttcatatggtaaaacataatggcgaaaagaaattcgtctgctccgtttgtgggaagAAATTCTCCAAGCGAAGTAACTTGAACTCCCACGCCGTATTACATACGAAAGAGAAGGACTATATATGCGTAGTCTGCAATAAGGCATTTGCGCACCAGACGAATCTGCGAATGCATATCCGCAACCGACATAGTCGGTTTGACCTGGCTCCTATCGTTGACGAAATTGACGAAAGCGATATGGTCCAAATGGAAATCATTCAAGAAGAATTAGAAGGAGAAGTGGCAGGACAATACATTCAATGA
Protein Sequence: MEFDEIVVKESPGLCRCCLSEGCYKDLGTEYTWMNETEVYADMLLECFDISITQHNEGPNGPNRLICEVCITRLRDACNFKKQVMDSEKKFIDMMGRGEFRPKMLIYQAQLKCEGPSAVEEPDDADVEYLEDDLDFGEVDLKDELIQPSVSDVTVTTLPVKGKRGRPRKNTPVKPDKRAKVAKVDDKAKTSKAVAKGEKRRTTEASSKSSMTSTRHNKLMKTNAIIVLETSTVIPFKWHRQNYLCFFCHLTFKDTDLLKEHTTNQHKKSNIKAAVSYLRRDEKVKIDVSVLECRSCNDKFDDLNALIEHLKYTHNIKFTEECGYGLIPYFLQNEVYNCAVCKEEFQYFMKLNQHMNEHYGKKPRKYKGTESSSMRRRRNLQILFNNTSIIPFKWRGKYLCFYCSKDIAEYTELRKHTKAHGSCSIKDHSLKVLKGGQNMEIKVDISLINCQVCAETLPSFEEIVAHLFDKHELEYDKGVEMAIEEYKLADLSCTGCDEKFTYFGYLVSHVNNTHPKNCLICENCNQKFNKRRDLFSHVKNYHREGGYQCEMCPQIFNSLNILRKHRNNRHLTRCNICNLKLPSAALRQKHIDLEHPDDGSLQCDTCFKEFHTKQGLKMHSRKCKGEEIFGIAIKEENIAMDLDLNYEDQAKKPCVKQIRENIVIVINMSTAIPFNFYKNKFNCFYCSKDFADSDLMREHAVMEHPVCDVKEKCIRKCRESVACVKIDISSLACKVCFESLTDLDHLIDHLIAKHDAKYDKSITTCLQPYRLIKDNMVCPHCPDLETEVTKHSASYLRRRNLQILLNNTTLIPFKWRGKYLCFYCGDDTKTPDRLRKHTKGHGPCSESDRAIRLVKSADIEIKIDVSDVSCEICSESFPFLNEIIDHLIIKHHLPYAKDVEMLLSAYRLLDLQCLLCDKTFNYLRKLISHMNVSHPNNSFECAECKKNFNKKRDLDSHIRLHHKKNHSCTKCDETFPTNSALHIHRSNAHSSTCNICFQVFASDSKRLVHQKSDHDSNHSQCGFCNKVLTTKQAFIRHAANCEQKPQEEIVIIDDEDKKVSVKEIRKSLACIFNMTTALPFKFFMNRLRCFYCTKDFTSCEDLKEHTSIEHPYCDISFKSMRLRNRYDGVQIKVDTSSLSCRLCQVPLQDLNDLIDHLSKEHKVKCDFSVESNLQPFKLIKDNYPCPICGEVYRYFGVLLKHVSAFHSGNKHICMYCGKAFRTDPNLRAHISRRHKIADNHKCGNCDLVFGTNSALRNHQGAVHGTKLVQCFECSEKFTSQYSMQRHLITSHGSKFNTVEDKYKKMEVARKLLIKRRNVEYVLQYSNVTPFMWHKGKYKCFYCNETTKDPVLLREHTTEAHQFANLELVVFDRTKNNRNKDAAVKIDVTNICCKLCPQAVTNLEELIHHLIIAHDAEYDVSVPNCLLPFKLDKDQPTCPTCNMKFVFFEYLLRHANKHHLSHHYICDVCGTSFQGENHLKMHYRYYHREGGYTCEYCGISLATLSKKILHEKNVHLVNLSTCPHCPETFKSPYLKKLHLANVHEVEELKIKCPFCPKVYPQESIMSRHMRRVHLREKNVECEVCGDKFFGPYDVKLHMVKHNGEKKFVCSVCGKKFSKRSNLNSHAVLHTKEKDYICVVCNKAFAHQTNLRMHIRNRHSRFDLAPIVDEIDESDMVQMEIIQEELEGEVAGQYIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00123574; iTF_00364251;
90% Identity: iTF_00364251;
80% Identity: -