Clon004560.1
Basic Information
- Insect
- Condylostylus longicornis
- Gene Symbol
- dmd-4
- Assembly
- GCA_029603195.2
- Location
- JAQSLO010000014.1:835848-848639[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8e-24 1.3e-20 73.6 10.8 1 47 24 70 24 70 0.98 2 3 0.53 3.9e+03 -1.5 0.1 28 43 270 285 269 288 0.77 3 3 1.8 1.3e+04 -3.2 0.6 23 31 476 484 474 486 0.72
Sequence Information
- Coding Sequence
- atgaaaggtTCTAAAATTAAGAATGGATTtagtagtttaaaaaatttcgataataaattattaagtccAAGAATACCAAAATGTGCTAGATGTAGAAATCATGGGATAATATCAGGTTTAAGGGGACATAAGAAAATGTGTACATATCGGACATGCCGTTGCCCTAAATGTGAATTAATACATGAACGTCAAAGAATTATGGCAGCTCAggtaGCGTTAAAACGTCAACAAGCTGTAGAAGATGCGATTGCATTAAGACTTGCTTCAAATGAAAAAGGTGTACCATTAGAAACTTTACCACcaggaaaaatttttggaatgacAGTAACAAATCCTTGTAATAGTCCACCACCGCCACCACTCTCATCTTCACCAACAATTTCCGATAAGGATTCAGTGAAATCAActtcttCAAATTCTTCAAATCCTACAGTATCACAGAGTGCAATTGATATGTTAGCACAATTATTTCCACATAGAAAACGATCAGTTTTAGAATTGGTATTAAAACGATGTGATTTAGATCTTTTAAGAGCAATTGAACAATGTTCACCATCACAATCTGTGAGTGCATTTAGACCACCCTCATCGCAGgtACCTTCAACAAGTTGTACATCAACCATTACATTACCATCATCCTCTACTGCGAGTAGTAGTGCATCAGTAGTTACACCAATTCAAATTCCAATAAATCAACCAACACCATTACCTCCTCAACCACACTATACACCTTTAATCGCATATCCAAAATGGTTATTACCAATGAGTATTCCTGTAACAATGGGTCATTTACCAAATTTAGCACCAAGATGTACTCTACCAAATTGTCCATCGTTAAAACGTCAACAAGCTGTAGAAGATGCGATTGCATTAAGACTTGCTTCAAATGAAAAAGGTGTACCATTAGAAACTTTACCACcaggaaaaatttttggaatgacAGTAACAAATCCTTGTAATAGTCCACCACCGCCACCACTCTCATCTTCACCAACAATTTCCGATAAGGATTCAGTGAAATCAActtcttCAAATTCTTCAAATCCTACAGTATCACAGAGTGCAATTGATATGTTAGCACAATTATTTCCACATAGAAAACGATCAGTTTTAGAATTGGTATTAAAACGATGTGATTTAGATCTTTTAAGAGCAATTGAACAATGTTCACCATCACAATCTGTGAGTGCATTTAGACCACCCTCATCGCAGgtACCTTCAACAAGTTGTACATCAACCATTACATTACCATCATCCTCTACTGCGAGTAGTAGTGCATCAGTAGTTACACCAATTCAAATTCCAATAAATCAACCAACACCATTACCTCCTCAACCACACTATACACCTTTAATCGCATATCCAAAATGGTTATTACCAATGAGTATTCCTGTAACAATGGGTCATTTACCAAATTTAGCACCAAGATGTACTCTACCAAATTGTCCATGTATGGATTCATTTCACttgaattaa
- Protein Sequence
- MKGSKIKNGFSSLKNFDNKLLSPRIPKCARCRNHGIISGLRGHKKMCTYRTCRCPKCELIHERQRIMAAQVALKRQQAVEDAIALRLASNEKGVPLETLPPGKIFGMTVTNPCNSPPPPPLSSSPTISDKDSVKSTSSNSSNPTVSQSAIDMLAQLFPHRKRSVLELVLKRCDLDLLRAIEQCSPSQSVSAFRPPSSQVPSTSCTSTITLPSSSTASSSASVVTPIQIPINQPTPLPPQPHYTPLIAYPKWLLPMSIPVTMGHLPNLAPRCTLPNCPSLKRQQAVEDAIALRLASNEKGVPLETLPPGKIFGMTVTNPCNSPPPPPLSSSPTISDKDSVKSTSSNSSNPTVSQSAIDMLAQLFPHRKRSVLELVLKRCDLDLLRAIEQCSPSQSVSAFRPPSSQVPSTSCTSTITLPSSSTASSSASVVTPIQIPINQPTPLPPQPHYTPLIAYPKWLLPMSIPVTMGHLPNLAPRCTLPNCPCMDSFHLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -