Ccol009603.1
Basic Information
- Insect
- Columbicola columbae
- Gene Symbol
- SUB1_1
- Assembly
- GCA_016920875.1
- Location
- JADMLL010000001.1:1158845-1159501[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.21 3.5e+03 -2.5 0.1 30 37 24 31 21 37 0.70 2 2 2.7e-23 4.5e-19 67.6 0.1 1 50 49 99 49 101 0.97
Sequence Information
- Coding Sequence
- ATGCCCAAAGACAAGAAAAAAAGAAGAAATAGCTCAGAATCCGATTCAGGCAGCTGTAGCTCAAGTGATGAGAAGCGGCCACCTTCAAAAAAGCAAAAGGCTACGGTAGTAAAAAAGGGAAAAACTGAAAATAATGAACCCCAATGGCATTTATCTGCTGATAAATTAATAAAAATTCGAGAATTTAAGGGTAAATTATATGTAGATATAAGACAGTATTACAATGGCCCTAATGGAGATTTACTTCCTACCAAAAAAGGAATAAGTCTACCAACTGATTTGTATCAGAAACTCAAAGGCTTGATTGGTGAGATTGATGAAGAACTTGCCAAGTTTTGA
- Protein Sequence
- MPKDKKKRRNSSESDSGSCSSSDEKRPPSKKQKATVVKKGKTENNEPQWHLSADKLIKIREFKGKLYVDIRQYYNGPNGDLLPTKKGISLPTDLYQKLKGLIGEIDEELAKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -