Cpec020362.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Colostygia pectinataria
Gene Symbol
-
Assembly
GCA_951394395.1
Location
OX596376.1:3761667-3774600[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.00076 0.043 14.7 0.1 1 23 297 319 297 319 0.97
2 25 0.49 28 5.8 0.1 2 23 344 365 343 365 0.95
3 25 0.011 0.64 11.0 0.2 2 23 388 410 387 410 0.95
4 25 0.049 2.8 9.0 1.4 1 23 414 436 414 436 0.98
5 25 0.77 44 5.2 2.1 1 23 441 464 441 464 0.96
6 25 7.8 4.5e+02 2.0 2.7 2 23 472 494 471 494 0.94
7 25 0.0021 0.12 13.3 1.0 1 23 501 524 501 524 0.97
8 25 0.0052 0.3 12.0 1.0 1 23 530 554 530 554 0.98
9 25 9.2e-05 0.0053 17.5 1.4 1 23 560 582 560 582 0.98
10 25 0.0082 0.47 11.4 0.1 1 23 641 663 641 663 0.97
11 25 2.8 1.6e+02 3.4 0.1 2 23 688 710 687 710 0.93
12 25 0.0023 0.13 13.1 2.8 2 23 732 754 731 754 0.93
13 25 0.00045 0.026 15.4 0.2 1 23 758 780 758 780 0.96
14 25 0.031 1.8 9.6 0.8 1 23 785 808 785 808 0.90
15 25 0.69 40 5.4 0.1 2 19 816 833 816 838 0.78
16 25 0.012 0.69 10.9 3.1 1 23 845 868 845 868 0.97
17 25 0.0041 0.24 12.4 0.5 1 23 874 898 874 898 0.95
18 25 0.021 1.2 10.2 2.6 1 23 904 926 904 926 0.93
19 25 2 1.2e+02 3.9 1.2 8 23 979 994 970 994 0.80
20 25 0.23 13 6.8 0.1 3 23 1021 1041 1019 1041 0.97
21 25 0.069 3.9 8.5 2.0 3 23 1061 1081 1059 1081 0.96
22 25 0.00026 0.015 16.1 0.6 1 23 1085 1107 1085 1107 0.97
23 25 7.6e-05 0.0044 17.8 0.6 1 23 1112 1134 1112 1134 0.97
24 25 0.036 2.1 9.4 4.4 2 23 1141 1163 1140 1163 0.95
25 25 0.11 6.6 7.8 0.2 2 23 1171 1193 1170 1193 0.94

Sequence Information

Coding Sequence
ATGTGGGAGCCTCATAGCGTGGATGCCGAAAAGGAAATCTACGGACAGATGCTCACACAATGTTTCTGTATCGAgTGGACAGTGGAGACTTGTGAAGAGGATGATCAGATCTGTGAAGACTGCATCTGGAAGCTGCGTGAGGCGCACACCTTCAAGACACAGGTGCTGCACTGCCAAAAGCAATTGGAGCAGTCAGAGGCAGATCACCTAGATAATGAAAACTATGATGTGGAATACTTAGATGAGGATATATTAGACAACCCTAAGAACGATAGAGATAGTTCCGAAGAAGAGAGTGTCAAAGATAGTCACAGTAGGAAAGAGAGTCACGGGGAGGAATATAGTCCTAGGAGGGagaatcatgatgatgacgaggATAATGATGCAGCTTTTCagaatgatgatgaagattatGATCCGGTTGAagATGAAGAACTTATAACAGAGATAGTTCCCCGGAAACGTAAACCACCTCGAAAAGGCGAAGAGAGTGACAGTAGTACAGAGAGACCCAAACCCAAATGGCCGAAGCAGTTGCCCAAACTTGAACGCTGGAAAACCTACAAGCAGTACTCTGAAGATTCTATGAAAGAAGCCATCAACGCTGTCACTACTAAGCGAATGAATCAGAATTTAGCCGCTAAAAATTACAACGTGCCGAGGAAAACACTGAGCGCTAAGATCCGCGctattaaaaATACCGCTGAGAACTCACAAAGTGCCGAGTCGGATTCAGACTATTCAGAAGAGGTTCGAGAAAGTATAAGCCAAGGCGGAAACACACGCAAAAGCATTTCGGAAGACGCCATAACACTATGGAAACACAGGGAAAATATTCACTCTATGCTAGCGTACTCCAACGCAACTCCAATACGATTCGTGGGTACATACGTGTGCGCACTCTGCCCAAACAAGTTCACGGATCCCACAGAACTGAAAGCACACACCGGAACCCACAGAAACATACCCAAGTCGTACAGAGTCGATCACGTGAGATCTCACGTGAGTAGGCTCGACGTGACCGATCTCAGATGCAAAATCTGCGGCATTAAGATCGAGGACCTTCGCACTATGATGCTGCATTTGCAAGAGCACGGAAAACCGATGCATTTCGACATCAAAAACCACATGGTCCCGTTCAAATTTGACACCAAAAGACTAGAATGCGTTGAATGCGGGCAGGAATTCAACCAGTTCAAGTTCCTAAGTGAACACATGGCTAGCACGCATTACAGGAATTATGTATGCGCGACATGCGACCGCGGATTCTTCTGCAAAGTGAATCTACTCTCGCACATGGATAGCCACAAGACCGGGAACTTTAACTGCAGTTACTGCGCGAATGTTTTTAACTCGCGTCGCAAAAAAACCACTCACGAGCGGATCAACCACTCGACAAAGACAAAAACCGTGAAATGCGGTTACTGCAGAATGCACTTCCAGAATTTAACACAGAAAAATTACCACGAACTGACCTCTCATAGGAAGAAACGCGTTTTGTACAATTGCAACGAGTGCGGGAGCAATTACGCTAGTCGCCGTTCGCTCCGGGATCATACAAAGAGAGAACATTTATCTGAACGTCCGTATAAATGTAATAAGGCAGGGTGCGACAAGGATTTCTTTTTGAAGAGAGCGTTGCAAGATCATAAGTTAACTCACAGTACCAAACCGTTGTTCCGTTGCAAGGTGTGTCTTAAGGTGTATAGAACGCCGAAGTCACTTAGAGGACACATGTACACGCATGATGAAAGGAAAGACAAGTGTCCAAAATATAACGCGGAGACAGATACACTGATACCAAGCAATTGCGGCGCGGTCACTGAAAGTACGGTGCTCCTAGCTAAGCACCGCGAGAATATACATTCTGTACTCGCGTACTCGAATGCCACGCCCATCCGTGGGTATTGGGGTGTGGGATATGCGTGCTCCTTCTGTCCTGAGCAGTACAACGACCCTGCTACACTGAAAATCCACTCACAATCCCACGCACCTATATCAGAAAATTACACAGTCAGAGATATAAGAAGGCATATAGTTAAACTAGATATTACTGGTTTAATGTGCCGTATTTGTAAAGTTATTATCGAGGAGTTGGAAACATTAATGCGCCATTTGAAAATAGAGCACGATAAACCGATGAATTTCGATATCAAAAACCACATAGTGCCATATAAGTTCGAGAATGAACTCCACTGTGTGAAATGCAACAAACAATTCAGTAATTTCAAGAATCTATCCGAACACATGAACGATCTGCATTTCCGAAACTACGAATGCGAGAATTGCGATCGTGGTTTCGTTAACAAAGCAACGCTAGTAACTCACAGCGCTAGACATAGAGTAGGCGAATTCGCTTGCAACTACTGCCCGAAAATATTCAGAACGCGATTAAGAAAAACTGAACACGAGCGTATACTTCACTTCCATAACAGCAAAACCAGAAAATGTGGATACTGCGACGAGAAATTCACAGATATCGCACTGAAAATCGACCATGAAGTTATAGTACACGGGACGGACCGTCCGGTGTTCAAATGTAATGCCTGTAATCGGTCTTTTGTTAGCCAAAGAACTTTGCGGTGTCATATACAGTCAGTGCATTTGATATCACGGCCATATAAGTGTGGCATGACCGCTTGTGACAaaagattttttgtaaaaagtgaACTGGACACTCATATTTTGACCCACGGTGATGTTAAGCTGTTCCAGTGTTCTCAGTGCCCTAGAAATTACAAGTCTACGAAAGCTCTCCGCGCGCATGGACATTTTCACGATGAGAAGAGGGAATTTCAATACAACAAAGAAGTATTCCCGGGATCGATCGCTCGCCAGTTCGTCTGCGAACTAAAAACCTTCCTCGCGCACTTCAACGTGATACCGTTCCGTTCGCGAAACAACAAGCTCGTGTGCTTCTACTGCGTCGAACGAAACGCATTCTCGACACACGACGAACTACGACAACACACCTCGAGTCACAACCTCACTGAAGTAGAAGCAGCTATGCGGCCATCTTGGATCAATCAGATTGTAAAACTAGATATAAAAAACATGGCGTGCAATATTTGCGAAGAACGCATTCCGAAATGGAATGACGCATTCAAACATCTAAAAACACACGACGTGAATCTAGCATTTCAGAACAAAATGATACCGTTTACGCTCGGCGATAGCTGCTGTACATTATGCGATCAGACATTTTCTGCATTCATGTTACTAGACTCGCATATGAACTCGCACTATCGTAACTTTGTATGCGGTCATTGCGGCGAGTCGTTTGTCAGTTTCGCGCGATTGCAAAAGCACGAGCAAATACACAATGTGGGTATATACCCGTGTGTGATTTGCAAAAAGGTTTTCGCTCAGgagaaatatttgaaaaagCACACTATAAACCACACTAATGAGCTTAAAGTGAAATGTCACTATTGCACAGAGAAGTTTAAAAGCGAGCATCAACGACAAGCACATATAGTCAAACAACATTCGGAGCATGTCGAGTATATAACTTGCGAGATATGTGGCATGGTGTTTGATTGGATAAGGGTTTTTACGAGGCATATGAAGAGGTCTCATGGAACCGGGCATAGTTGCGtgttCATCAATGCTATCACTCAAGTTATTTCATCTCATTTCCATCTTTATGCCGATGATCTACAAATTTATAGTCACTTTAAAGTAGATGAAGTCTCCTTTGGCATTAATCAAATCAACGAAGATCTTGATAATATTAACTCATGGGCGAAGGCTTTCGGACTACTGGTTAACCCTTCGAAGTCTCAGGCTTTAATTTGCGGTTGCTCTTTTATGGTGAATAAAGTGTGTAGATCTTCCCTGCCTCCTCTTCTATATGCTAACTCTCCCATCTACTTTTCCGCCAATGCCAAGAACCTGGGTGTTATTTTTGATTCTCAATTGTCTTGGACAAGCCACGTAAATGAAATTAGTAAACGAGTCAATTACTCATTCCAATCTCTCAAGCGATTTCAGAAATTTTTGCCAATTAAGACCAAAGTAACATTGGCTCAAACACTTTTATTACCTCTTCTAGATTATGCCGACTCATGTTTCATCGACGCCACGGAAGAGTATCTAAATAAACTGGAGCGTCTTCAAAACTTGtgtattcgttttattttcggacTGCGCAAGTTTGATCACGTCTCAATGTTCAGAGCCCAGTTGAAATGGCTCCCTATACGTCGTCGCCGTGATCTACATGTTCTATCCCTTCTTTATAACATTCTGAACAATCCTCTCTCTCCTTCTTATCTTCGTGAGCGTTTTGATTTCCTTGTCCCTCGTGGTGAGCCCTGCAGAACAGCTAAATCCTTACTTCTTAAAACTCCCTCTCACTCCTCTAGTCGCTATAGTGGATCTTTTACTGTCCACAGTGTTAAAGCGTGGAACTCACTCCCTCATGAAATCCGCGCTAGTCCTTCACTCGGTATTTTCAAGCGAAAAGTCAAAGAGCACTATCTTTCCTTGTAA
Protein Sequence
MWEPHSVDAEKEIYGQMLTQCFCIEWTVETCEEDDQICEDCIWKLREAHTFKTQVLHCQKQLEQSEADHLDNENYDVEYLDEDILDNPKNDRDSSEEESVKDSHSRKESHGEEYSPRRENHDDDEDNDAAFQNDDEDYDPVEDEELITEIVPRKRKPPRKGEESDSSTERPKPKWPKQLPKLERWKTYKQYSEDSMKEAINAVTTKRMNQNLAAKNYNVPRKTLSAKIRAIKNTAENSQSAESDSDYSEEVRESISQGGNTRKSISEDAITLWKHRENIHSMLAYSNATPIRFVGTYVCALCPNKFTDPTELKAHTGTHRNIPKSYRVDHVRSHVSRLDVTDLRCKICGIKIEDLRTMMLHLQEHGKPMHFDIKNHMVPFKFDTKRLECVECGQEFNQFKFLSEHMASTHYRNYVCATCDRGFFCKVNLLSHMDSHKTGNFNCSYCANVFNSRRKKTTHERINHSTKTKTVKCGYCRMHFQNLTQKNYHELTSHRKKRVLYNCNECGSNYASRRSLRDHTKREHLSERPYKCNKAGCDKDFFLKRALQDHKLTHSTKPLFRCKVCLKVYRTPKSLRGHMYTHDERKDKCPKYNAETDTLIPSNCGAVTESTVLLAKHRENIHSVLAYSNATPIRGYWGVGYACSFCPEQYNDPATLKIHSQSHAPISENYTVRDIRRHIVKLDITGLMCRICKVIIEELETLMRHLKIEHDKPMNFDIKNHIVPYKFENELHCVKCNKQFSNFKNLSEHMNDLHFRNYECENCDRGFVNKATLVTHSARHRVGEFACNYCPKIFRTRLRKTEHERILHFHNSKTRKCGYCDEKFTDIALKIDHEVIVHGTDRPVFKCNACNRSFVSQRTLRCHIQSVHLISRPYKCGMTACDKRFFVKSELDTHILTHGDVKLFQCSQCPRNYKSTKALRAHGHFHDEKREFQYNKEVFPGSIARQFVCELKTFLAHFNVIPFRSRNNKLVCFYCVERNAFSTHDELRQHTSSHNLTEVEAAMRPSWINQIVKLDIKNMACNICEERIPKWNDAFKHLKTHDVNLAFQNKMIPFTLGDSCCTLCDQTFSAFMLLDSHMNSHYRNFVCGHCGESFVSFARLQKHEQIHNVGIYPCVICKKVFAQEKYLKKHTINHTNELKVKCHYCTEKFKSEHQRQAHIVKQHSEHVEYITCEICGMVFDWIRVFTRHMKRSHGTGHSCVFINAITQVISSHFHLYADDLQIYSHFKVDEVSFGINQINEDLDNINSWAKAFGLLVNPSKSQALICGCSFMVNKVCRSSLPPLLYANSPIYFSANAKNLGVIFDSQLSWTSHVNEISKRVNYSFQSLKRFQKFLPIKTKVTLAQTLLLPLLDYADSCFIDATEEYLNKLERLQNLCIRFIFGLRKFDHVSMFRAQLKWLPIRRRRDLHVLSLLYNILNNPLSPSYLRERFDFLVPRGEPCRTAKSLLLKTPSHSSSRYSGSFTVHSVKAWNSLPHEIRASPSLGIFKRKVKEHYLSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00361563;
90% Identity
iTF_00361563;
80% Identity
iTF_00361563;