Cpec020362.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Colostygia pectinataria
Gene Symbol
-
Assembly
GCA_951394395.1
Location
OX596376.1:3761667-3774600[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.1e-09 5.6e-06 26.4 0.1 1 35 192 226 192 235 0.92

Sequence Information

Coding Sequence
ATGTGGGAGCCTCATAGCGTGGATGCCGAAAAGGAAATCTACGGACAGATGCTCACACAATGTTTCTGTATCGAgTGGACAGTGGAGACTTGTGAAGAGGATGATCAGATCTGTGAAGACTGCATCTGGAAGCTGCGTGAGGCGCACACCTTCAAGACACAGGTGCTGCACTGCCAAAAGCAATTGGAGCAGTCAGAGGCAGATCACCTAGATAATGAAAACTATGATGTGGAATACTTAGATGAGGATATATTAGACAACCCTAAGAACGATAGAGATAGTTCCGAAGAAGAGAGTGTCAAAGATAGTCACAGTAGGAAAGAGAGTCACGGGGAGGAATATAGTCCTAGGAGGGagaatcatgatgatgacgaggATAATGATGCAGCTTTTCagaatgatgatgaagattatGATCCGGTTGAagATGAAGAACTTATAACAGAGATAGTTCCCCGGAAACGTAAACCACCTCGAAAAGGCGAAGAGAGTGACAGTAGTACAGAGAGACCCAAACCCAAATGGCCGAAGCAGTTGCCCAAACTTGAACGCTGGAAAACCTACAAGCAGTACTCTGAAGATTCTATGAAAGAAGCCATCAACGCTGTCACTACTAAGCGAATGAATCAGAATTTAGCCGCTAAAAATTACAACGTGCCGAGGAAAACACTGAGCGCTAAGATCCGCGctattaaaaATACCGCTGAGAACTCACAAAGTGCCGAGTCGGATTCAGACTATTCAGAAGAGGTTCGAGAAAGTATAAGCCAAGGCGGAAACACACGCAAAAGCATTTCGGAAGACGCCATAACACTATGGAAACACAGGGAAAATATTCACTCTATGCTAGCGTACTCCAACGCAACTCCAATACGATTCGTGGGTACATACGTGTGCGCACTCTGCCCAAACAAGTTCACGGATCCCACAGAACTGAAAGCACACACCGGAACCCACAGAAACATACCCAAGTCGTACAGAGTCGATCACGTGAGATCTCACGTGAGTAGGCTCGACGTGACCGATCTCAGATGCAAAATCTGCGGCATTAAGATCGAGGACCTTCGCACTATGATGCTGCATTTGCAAGAGCACGGAAAACCGATGCATTTCGACATCAAAAACCACATGGTCCCGTTCAAATTTGACACCAAAAGACTAGAATGCGTTGAATGCGGGCAGGAATTCAACCAGTTCAAGTTCCTAAGTGAACACATGGCTAGCACGCATTACAGGAATTATGTATGCGCGACATGCGACCGCGGATTCTTCTGCAAAGTGAATCTACTCTCGCACATGGATAGCCACAAGACCGGGAACTTTAACTGCAGTTACTGCGCGAATGTTTTTAACTCGCGTCGCAAAAAAACCACTCACGAGCGGATCAACCACTCGACAAAGACAAAAACCGTGAAATGCGGTTACTGCAGAATGCACTTCCAGAATTTAACACAGAAAAATTACCACGAACTGACCTCTCATAGGAAGAAACGCGTTTTGTACAATTGCAACGAGTGCGGGAGCAATTACGCTAGTCGCCGTTCGCTCCGGGATCATACAAAGAGAGAACATTTATCTGAACGTCCGTATAAATGTAATAAGGCAGGGTGCGACAAGGATTTCTTTTTGAAGAGAGCGTTGCAAGATCATAAGTTAACTCACAGTACCAAACCGTTGTTCCGTTGCAAGGTGTGTCTTAAGGTGTATAGAACGCCGAAGTCACTTAGAGGACACATGTACACGCATGATGAAAGGAAAGACAAGTGTCCAAAATATAACGCGGAGACAGATACACTGATACCAAGCAATTGCGGCGCGGTCACTGAAAGTACGGTGCTCCTAGCTAAGCACCGCGAGAATATACATTCTGTACTCGCGTACTCGAATGCCACGCCCATCCGTGGGTATTGGGGTGTGGGATATGCGTGCTCCTTCTGTCCTGAGCAGTACAACGACCCTGCTACACTGAAAATCCACTCACAATCCCACGCACCTATATCAGAAAATTACACAGTCAGAGATATAAGAAGGCATATAGTTAAACTAGATATTACTGGTTTAATGTGCCGTATTTGTAAAGTTATTATCGAGGAGTTGGAAACATTAATGCGCCATTTGAAAATAGAGCACGATAAACCGATGAATTTCGATATCAAAAACCACATAGTGCCATATAAGTTCGAGAATGAACTCCACTGTGTGAAATGCAACAAACAATTCAGTAATTTCAAGAATCTATCCGAACACATGAACGATCTGCATTTCCGAAACTACGAATGCGAGAATTGCGATCGTGGTTTCGTTAACAAAGCAACGCTAGTAACTCACAGCGCTAGACATAGAGTAGGCGAATTCGCTTGCAACTACTGCCCGAAAATATTCAGAACGCGATTAAGAAAAACTGAACACGAGCGTATACTTCACTTCCATAACAGCAAAACCAGAAAATGTGGATACTGCGACGAGAAATTCACAGATATCGCACTGAAAATCGACCATGAAGTTATAGTACACGGGACGGACCGTCCGGTGTTCAAATGTAATGCCTGTAATCGGTCTTTTGTTAGCCAAAGAACTTTGCGGTGTCATATACAGTCAGTGCATTTGATATCACGGCCATATAAGTGTGGCATGACCGCTTGTGACAaaagattttttgtaaaaagtgaACTGGACACTCATATTTTGACCCACGGTGATGTTAAGCTGTTCCAGTGTTCTCAGTGCCCTAGAAATTACAAGTCTACGAAAGCTCTCCGCGCGCATGGACATTTTCACGATGAGAAGAGGGAATTTCAATACAACAAAGAAGTATTCCCGGGATCGATCGCTCGCCAGTTCGTCTGCGAACTAAAAACCTTCCTCGCGCACTTCAACGTGATACCGTTCCGTTCGCGAAACAACAAGCTCGTGTGCTTCTACTGCGTCGAACGAAACGCATTCTCGACACACGACGAACTACGACAACACACCTCGAGTCACAACCTCACTGAAGTAGAAGCAGCTATGCGGCCATCTTGGATCAATCAGATTGTAAAACTAGATATAAAAAACATGGCGTGCAATATTTGCGAAGAACGCATTCCGAAATGGAATGACGCATTCAAACATCTAAAAACACACGACGTGAATCTAGCATTTCAGAACAAAATGATACCGTTTACGCTCGGCGATAGCTGCTGTACATTATGCGATCAGACATTTTCTGCATTCATGTTACTAGACTCGCATATGAACTCGCACTATCGTAACTTTGTATGCGGTCATTGCGGCGAGTCGTTTGTCAGTTTCGCGCGATTGCAAAAGCACGAGCAAATACACAATGTGGGTATATACCCGTGTGTGATTTGCAAAAAGGTTTTCGCTCAGgagaaatatttgaaaaagCACACTATAAACCACACTAATGAGCTTAAAGTGAAATGTCACTATTGCACAGAGAAGTTTAAAAGCGAGCATCAACGACAAGCACATATAGTCAAACAACATTCGGAGCATGTCGAGTATATAACTTGCGAGATATGTGGCATGGTGTTTGATTGGATAAGGGTTTTTACGAGGCATATGAAGAGGTCTCATGGAACCGGGCATAGTTGCGtgttCATCAATGCTATCACTCAAGTTATTTCATCTCATTTCCATCTTTATGCCGATGATCTACAAATTTATAGTCACTTTAAAGTAGATGAAGTCTCCTTTGGCATTAATCAAATCAACGAAGATCTTGATAATATTAACTCATGGGCGAAGGCTTTCGGACTACTGGTTAACCCTTCGAAGTCTCAGGCTTTAATTTGCGGTTGCTCTTTTATGGTGAATAAAGTGTGTAGATCTTCCCTGCCTCCTCTTCTATATGCTAACTCTCCCATCTACTTTTCCGCCAATGCCAAGAACCTGGGTGTTATTTTTGATTCTCAATTGTCTTGGACAAGCCACGTAAATGAAATTAGTAAACGAGTCAATTACTCATTCCAATCTCTCAAGCGATTTCAGAAATTTTTGCCAATTAAGACCAAAGTAACATTGGCTCAAACACTTTTATTACCTCTTCTAGATTATGCCGACTCATGTTTCATCGACGCCACGGAAGAGTATCTAAATAAACTGGAGCGTCTTCAAAACTTGtgtattcgttttattttcggacTGCGCAAGTTTGATCACGTCTCAATGTTCAGAGCCCAGTTGAAATGGCTCCCTATACGTCGTCGCCGTGATCTACATGTTCTATCCCTTCTTTATAACATTCTGAACAATCCTCTCTCTCCTTCTTATCTTCGTGAGCGTTTTGATTTCCTTGTCCCTCGTGGTGAGCCCTGCAGAACAGCTAAATCCTTACTTCTTAAAACTCCCTCTCACTCCTCTAGTCGCTATAGTGGATCTTTTACTGTCCACAGTGTTAAAGCGTGGAACTCACTCCCTCATGAAATCCGCGCTAGTCCTTCACTCGGTATTTTCAAGCGAAAAGTCAAAGAGCACTATCTTTCCTTGTAA
Protein Sequence
MWEPHSVDAEKEIYGQMLTQCFCIEWTVETCEEDDQICEDCIWKLREAHTFKTQVLHCQKQLEQSEADHLDNENYDVEYLDEDILDNPKNDRDSSEEESVKDSHSRKESHGEEYSPRRENHDDDEDNDAAFQNDDEDYDPVEDEELITEIVPRKRKPPRKGEESDSSTERPKPKWPKQLPKLERWKTYKQYSEDSMKEAINAVTTKRMNQNLAAKNYNVPRKTLSAKIRAIKNTAENSQSAESDSDYSEEVRESISQGGNTRKSISEDAITLWKHRENIHSMLAYSNATPIRFVGTYVCALCPNKFTDPTELKAHTGTHRNIPKSYRVDHVRSHVSRLDVTDLRCKICGIKIEDLRTMMLHLQEHGKPMHFDIKNHMVPFKFDTKRLECVECGQEFNQFKFLSEHMASTHYRNYVCATCDRGFFCKVNLLSHMDSHKTGNFNCSYCANVFNSRRKKTTHERINHSTKTKTVKCGYCRMHFQNLTQKNYHELTSHRKKRVLYNCNECGSNYASRRSLRDHTKREHLSERPYKCNKAGCDKDFFLKRALQDHKLTHSTKPLFRCKVCLKVYRTPKSLRGHMYTHDERKDKCPKYNAETDTLIPSNCGAVTESTVLLAKHRENIHSVLAYSNATPIRGYWGVGYACSFCPEQYNDPATLKIHSQSHAPISENYTVRDIRRHIVKLDITGLMCRICKVIIEELETLMRHLKIEHDKPMNFDIKNHIVPYKFENELHCVKCNKQFSNFKNLSEHMNDLHFRNYECENCDRGFVNKATLVTHSARHRVGEFACNYCPKIFRTRLRKTEHERILHFHNSKTRKCGYCDEKFTDIALKIDHEVIVHGTDRPVFKCNACNRSFVSQRTLRCHIQSVHLISRPYKCGMTACDKRFFVKSELDTHILTHGDVKLFQCSQCPRNYKSTKALRAHGHFHDEKREFQYNKEVFPGSIARQFVCELKTFLAHFNVIPFRSRNNKLVCFYCVERNAFSTHDELRQHTSSHNLTEVEAAMRPSWINQIVKLDIKNMACNICEERIPKWNDAFKHLKTHDVNLAFQNKMIPFTLGDSCCTLCDQTFSAFMLLDSHMNSHYRNFVCGHCGESFVSFARLQKHEQIHNVGIYPCVICKKVFAQEKYLKKHTINHTNELKVKCHYCTEKFKSEHQRQAHIVKQHSEHVEYITCEICGMVFDWIRVFTRHMKRSHGTGHSCVFINAITQVISSHFHLYADDLQIYSHFKVDEVSFGINQINEDLDNINSWAKAFGLLVNPSKSQALICGCSFMVNKVCRSSLPPLLYANSPIYFSANAKNLGVIFDSQLSWTSHVNEISKRVNYSFQSLKRFQKFLPIKTKVTLAQTLLLPLLDYADSCFIDATEEYLNKLERLQNLCIRFIFGLRKFDHVSMFRAQLKWLPIRRRRDLHVLSLLYNILNNPLSPSYLRERFDFLVPRGEPCRTAKSLLLKTPSHSSSRYSGSFTVHSVKAWNSLPHEIRASPSLGIFKRKVKEHYLSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00361859;
90% Identity
iTF_00361859;
80% Identity
iTF_00361859;