Cpec016820.1
Basic Information
- Insect
- Colostygia pectinataria
- Gene Symbol
- Lztr1
- Assembly
- GCA_951394395.1
- Location
- OX596369.1:4158576-4169478[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.2e-16 3.6e-14 53.3 0.0 4 109 362 496 359 497 0.85 2 4 7.7 2.3e+03 -0.8 0.0 77 107 496 526 494 528 0.87 3 4 1.1e-15 3.4e-13 50.1 0.0 9 97 591 677 586 692 0.83 4 4 0.72 2.2e+02 2.5 0.1 77 104 691 718 680 723 0.80
Sequence Information
- Coding Sequence
- ATGACGACAAAGCTATTGACTGAAGAACTTCGCAATCCAAGGGAGTTGGACGTTAGCCTGAAGATGGAGTTTGGACCGTTTGAGGCAATTCACAAGTGGAAATTAGTATCTGAATGTTCAGAATTTGTTGGTGCCAGACGGAGCAAACACACTGTAATAGCTTACAAAGATGCTCTCTATGTGTTCGGGGGTGATAATGGCAAGACTATGTTAAATGACTTCATCAGATTTGATATCAGTGAGACATCTTGGACAAGTGTTGGGGGAATGGCAAGTGCGCCTCCCCCAAGATATCACCACTCAGCTGtgATTCACCGCCAATCGATGTTTGTATTTGGAGGGTACACAGGTGACATACTTGCAAACTCCAATCTTACGAACAGGAATGATCTCTATGAGTACAGGTTTTCTACAGCTTCCTGGGTGCAATGGAAATTTACTGGCCAAGAGCCAGTACCGAGATCAGCTCACGGAGCCGCCGTATACGACGATAAACTGTGGATATTCGCCGGTTACGACGGAAACGCGAGGTTGAACGATATGTGGACTTGTAGTTTAGTGggtgagaACCACCAATGGGAGTGTATAGAGCAGAAGGGTGAATGTCCTCCGACTTGTTGCAACTTCCCGGTGTGCGTGGCGCGCGGGAAGATGTACGTGTTCTCGGGGCAGAGCGGGGCTAAGATCACCAACGCACTGTTCCAATTCGACTTCGAGAACCACacTTGGAGTAGAGTTTGCACTGAGCACCTGCTCCGATGCGCCGGGCCCGCTCCGGTGCGTCGCTACGGTCACGTGATGGTGGCTCACGCGAGCCACTTGTACGTGTTTGGAGGCGCCGCTGACAGCACACTGGCCGCTGATTTGCATTGCTACGATCTTGACACGCAAATGTGGTCCATAGTGCAAACATCGGCGGACTCTAAGATCCCGTCCGGGCGGCTGTTCCACGCGGGCGCGGTCGCGGACGACGCCTTGTTCATATTCGGGGGGACGGTCGACAACAACGTGCGGAGCGGGGAACTGTTCCGCTTTCAGTTATCGAAGTACCCGCGCTGCACTCTCCACGAAGACTTCGGGCGCATCCTGAAGTCCCATCAGTTCTGTGACATCACTCTGTTGGTCGGCGACGAGCAGATGCCAGTGAAGGCGCACCAGGCGATCATAGCCGCGAGATCTCACTACCTCAAGGCTAAGATAAAAGAGGCCCGGTTAGAGCGAGACAGACGGCTCGCGTCGGGCGAGAGGCTAGACGCGAGTGAATACAGAACGCCGCCGGAAGTGACGGTGAAGCTGCCGGAAGCTACCCCGGAAGCCTTCAAGATGGTGCTCAATTATATCTACACTGATCGGATCGATCCCACtgaaaaagATGAGGATCCCGCATCACCAGCCACCATCCTCCTGGTGATGGAGGTCCTCCGTCTAACCCTCCGGTTGAACATACCGCGACTGCGCGGACTATGCGCTCGCTATCTGCGCGCTAACCTCTGCTCGAGTAACGTACTACCGGCGTTACATGCCGCTCATCATGCTAACTTGCAGTGTATCAAGGAGTATTGTTTGAGGTTTGTGGTGAAGGAGTACAACTTCACGCCGATAGTGATGTCGAAGGAGTTCGAGATGATGCAGCAGAGCCTCATGGTGGAGATCATCAGGCGCAGGCAGCAGCCGCCGCCCAAGCAGCCGCTCACCACCAGCTACGACGATGAGGATATCGCAGGCACAACATTAGAACAAGACATGGCGATGCTGATCAGTGGCGACAGCGAGTTGAGCGACATCGAGCTACAAGTTGGCGCGACTTGTCGGCGCGCGCATCGCTCCGTGCTCGCCGCGCGCGCATCCTACTTCGAGGCGATGTTCCGCTCCTTCTCGCCGCCTGACAACAGAGTCAAGCTTTCCGATATGATTCCATCAGACGAAGCGTTTGACTCATTGTTGCGGTACATCTACTATGGAGATACCAAGATGCCGACTGAGGACTCACTCTATCTGTTCCAAGCTCCTATCTAttacgGTTTCACCAACAACCGCTTACAAGTGTTCTGCAAACACAATCTCCAAAGCAACGTGTCGCAGGAAAACGTGCTCGCTATACTACAAGCGGCCGATAGAATGCACGCGTCTGATATTAAGGAGTACGCGTTGAAGATGATTGCGCATCACTTTGGATCGgtgGCACGCCAAGACGCAATAAAGAACCTCTCCCAATCCCTTCTCGTGGATATAATATGCACGTTAGCGGAGGAAACCCACTTCTCATCACCAACTCCTCCGGAGCCCAGTGCATTGCCGGCTTCATCATCAGCCGACACTATTTGTGAAGACTCTGAGAATGTTGCCAGATATCGAAAGTCAtga
- Protein Sequence
- MTTKLLTEELRNPRELDVSLKMEFGPFEAIHKWKLVSECSEFVGARRSKHTVIAYKDALYVFGGDNGKTMLNDFIRFDISETSWTSVGGMASAPPPRYHHSAVIHRQSMFVFGGYTGDILANSNLTNRNDLYEYRFSTASWVQWKFTGQEPVPRSAHGAAVYDDKLWIFAGYDGNARLNDMWTCSLVGENHQWECIEQKGECPPTCCNFPVCVARGKMYVFSGQSGAKITNALFQFDFENHTWSRVCTEHLLRCAGPAPVRRYGHVMVAHASHLYVFGGAADSTLAADLHCYDLDTQMWSIVQTSADSKIPSGRLFHAGAVADDALFIFGGTVDNNVRSGELFRFQLSKYPRCTLHEDFGRILKSHQFCDITLLVGDEQMPVKAHQAIIAARSHYLKAKIKEARLERDRRLASGERLDASEYRTPPEVTVKLPEATPEAFKMVLNYIYTDRIDPTEKDEDPASPATILLVMEVLRLTLRLNIPRLRGLCARYLRANLCSSNVLPALHAAHHANLQCIKEYCLRFVVKEYNFTPIVMSKEFEMMQQSLMVEIIRRRQQPPPKQPLTTSYDDEDIAGTTLEQDMAMLISGDSELSDIELQVGATCRRAHRSVLAARASYFEAMFRSFSPPDNRVKLSDMIPSDEAFDSLLRYIYYGDTKMPTEDSLYLFQAPIYYGFTNNRLQVFCKHNLQSNVSQENVLAILQAADRMHASDIKEYALKMIAHHFGSVARQDAIKNLSQSLLVDIICTLAEETHFSSPTPPEPSALPASSSADTICEDSENVARYRKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01219871;
- 90% Identity
- -
- 80% Identity
- -