Cpec004798.1
Basic Information
- Insect
- Colostygia pectinataria
- Gene Symbol
- Tf2-12
- Assembly
- GCA_951394395.1
- Location
- OX596352.1:12745410-12757614[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.3e-73 2.2e-68 231.1 18.8 1 278 1326 1591 1326 1600 0.89 2 2 0.66 1.6e+04 -4.8 12.4 1 48 1606 1652 1606 1684 0.64
Sequence Information
- Coding Sequence
- ATGGAGCACGCGCGGCCTCCGGCGGAATTAAGTCTGGAAGGCGGTCCGGCTAATCGGGCCGAAGCGTGGCAGAAATGGCTACGGCAGTTTAGCGTATTTCTCAAGGCTTCCGGTGTCGACAAGGAGAAATCAGATGTTAAAGCTAGCTTATTGGTGAACTTGATTGGGGCAGAAGGATACGATGTTTACACGACTTTCAAATATACTAAAGAAGAGGATAAGGATAGTTTTGACATCATCGTACGTAAATTTAACGCACATTTTGAAACAAAGCAAAACACCACCATGGcccgttttaaatttttttcgaGAAATCAAGAAGAGGGCGAATCTATCGACGAGTACGTTACTGCGTTAAAGCTTCTAACTCAACGTTGTGAGTTTGAGCACCTAGAGGAGGGCCTGGTGCGCGATAGAATCGTGTGCGGAGTACAAGACGGCAAGCTGCGAGATAGACTTCTCAGGGCCGATGACCTCACTCTGATGCGAGCGGTCAAAATATGTCAGGCTAACGAAATGTCTACGGAGGAGCAGAGGCAGATCGAGGGGACCAAGGCAGCAGGAGGACAAGTGGTAGCGGTCGACGCGATGAGCGCGCGAGCCTACCGCGCCGGTGCTggcgggcgcggcggcgcggccgGGCGGGCGCGCGGCGGCGCAGGTGGAACGCGCCAGCCGCAGCGGGCGGCGTGGCGCGGCGCCCAGCACCAGCACCAGCGGGGGCGCGGGCAGGACGTGGTAGCGACCAGTTCTAGGATGTGCTGTTCCGCGTGCGGTATTGCTACTTGTGATGGGTACAAGTGTGCGGCAAAAAATGCGATGTGTTTTTGGTGCAACGAACGcggtcattttaaaaatatgtgtcCGAAACTGCGTAAACGTGTGCTGCAGCTTGACGCCGCAGCCTGTGCCGGTGCCGGTGCCGGTGCAGAGGACGaggacggcggcggcggcgaggaCAGCGACGGGCTGTACTATGTCTCTGCGTTATCAGGGACGAAGGAAAGTAAGGACTCTAAATGGTATGAAACTTTGATATTTGTTAGTACCGGGGCACAAGAAAGTTTCAAATTAGACTCGGGATCTGATTTAAACGTTATGTCGTTTAGCAAGTTTGAGAAGCTAGGGCtttcagtaaatattttaaattcagatAATACTAAGGAGCAATCTTTTTGTGGAAATTTAATACCTATTGTTGGGCATTGTTTTTTGgattgtttatataaaaatgtaaattataaattgcgCTTTATTATCGCTGATTTTGATTGTCAGAGCGTTCTAGGCAAATATGCATGTGAAGAGTTAGGAATGTTGAAGCGTATTATGTCTATAAATATAGACAGGTATAGTGATATATTTAAAGGACTCGGTAAATTACCCGGTAAATACAGTATCATAGTAGAGAAGTGCGCTCAGCCGTCGGTCTGTCCGGTTAGAAAAATTCCTATAGGCGTGCGTGATAAGTTATTGCAGGAGTTGGTGCGTATGGAGAGTATGGGTGTTATTAGAAAGGTACTGCACCCGACACCGTGGGTGAACGCTATAGTGGTGGCGGCCAAAAAGGACGGCACTATTCGCGTGTGCCTCGACCCGCGGCCGCTCAACCGCGTCGTGCGGCGCGCGCACTATCCGCTGCCGACGCTCACCGAGATCGCCACCAAGCTCGAGGGGGCTCAGTACTTTAGTAAGTTAGACGCGCGTTCAGGGTTCTGGATGGTGCAGCTGGACGACGCCAGTGCTGATCTCTGCACATTCGGAACTCCATTTGGTAGGTATCAGTTTCTAAGGTTGCCGTACGGCATCAACTGCGCGTCGGAGGTGTTTCACTCAAAGGTTCGTCAAATCCTGGAAGATTTAGAGGGAGTAGACTCCTTCATCGATGACGTCATTGTCTGGGGCTCCAGTAAATCGCAACACGATGAACGCCTCAGAAAACTGTTGGACAGGGCTCGGGAGGCAGGCATAAAGTTTAACGAAAAGAAATGTGAATTTCAAGTACAAAAGGTTAGTTATTTAGGACACGTTTTTAGCGCAGACGGCATGTCAATAGATAGAAACAAGGTTAGAGCGATAGAAGATATGCCCATTCCGAAAGATAGACCGTCACTCGAAAGGTTTTTGGGCATGATTAACTACTTGTCTAAGTTCATACCGAACTATTCGGAACTAGCGCTTCCGCTTCGTAATCTACTTAAAAAAGATAGCGAGTGGGTGTGGGAGTCGGCGCAGGAAGGCGCGGCGCGAGCTTTGCAGCGCGCCGTGTGTGCGGCACCCGTACTGGCGCTGTACTCGGCGCGCGAGCCCGTGCTGCTGTCGGTGGACGCCAGCTCGCGCGCGCTGGGGGCCGTGCTGCTGCAGGCGGGCCGCCCGGTCGAGTACGCCTCCGCCACACTCACTGACACGCAGTGCAGGTATGCACAGATAGAAAAGGAGCTCCTGGCCATCGTTTTTGGTCTTGAGCGGTTTCATCAGTACGTGTACGGGCGTCGTGATGTCACGGTAGAATCTGATCATAAACCACTAGAGGCATTGTTCAAGAAATCACTAGATTCGGTTCCTGCGAGACTTCAGCGGATGATGCTGCGCATTCAGGGCTACCATTTCACCGTGATATACAAACCCGGTAAGTACATGTATCTGGCTGATGCATTATCTAGGGCAGCTTTACCGGAACTGATGACAGATAAAGTATCGGAGGAAGTAGAAGAACAATCATGTTTCTTAATAGAAAATGTTCGGTTCAGTGCTAGCAGGTTAGACATTATTAAATATGCGATTATCAACGATATTGAGTGTCAACTTCTTATAAAGTGCATCCAGCAAGGCTGGCCTGAAAGTAAATATGAGGTCGACGAACGTATCAGAGGGCAATGGTCTTACAGGGACAGTTTTGGATTTATTGATGGTGTTCTTTTTAAGGATAATTTAGTTTACATTCCGAAGTGTGTACGGACTGAAATGCTTAATCGGCTGCACGATGGGCATATGGGCATCGACAGATGCAAGCGTCACGCTCGCGAAGTAATGTTCTGGCCGGGCATCTCGAGAGACGTGGAAGCCATGGTGCGCCGTTGCCGAGCTTGCGCCGAGCGCGCGCCCCGAGCCACGCGCGAGCCGCTCATGCCGCATCACATACCCCCTTTGCCGTGGTCTAAGGTGGGCTCCGATATATTTCAATATGGTGGCAAGTACTTTTTAATTCTTGTAGACTATTTCTCAAACTTTGTGGAGGTGAATCCGTTGACCAGCATTGGAACGAAGGCGGTGGTAAGTGCCATGAGAGATCAGTTTGCAAGACATGGCGTCCCGCAAGAGCTTATCACGGACAATGGACCCGCATATTCTTCAAAGGAATTTGGTGAGTTCAGTAAAATGTGGGGCTTCAAGCATACCACCAGTTCGCCGAATTATGCTCAGTCAAACGGACAAAGCGAGCGCTGTATCcaaaccataaaaaatattttaattaaatcgaGCAATTCGGGCACCGATTTTTATTTGGGTCTTTTGAATTATAGAGCAACACCTCGCAATGGAATCAGTTCACCCTCTGAGCTTTTAATGGGCCGTCGCCTCAATACGAGACTACCATctcatgtaagtaaattaataccTAGCAGAGATAACGAAAAGGACTACAATGGAATGTTGCGTAACCAACACGTAGACAAAGCTTACTACGACAGACGGGCGAAGCAACTACCTGAGCTATCACCTGGTCAACCGGTTCTCGTGACCGATGAAGGTAAACGCAAACGCGCTCGAATCATAGGGCGCGCTGCTGGCCCTCGGTCGTATTTTGTTGCAGACAGCTCTGGCAGACAGTTCAGGCGAAACAGACGACATCTGCTTAAGCTGCCAACTGTTAAAGAGGAGTCTTCATTAAGTCCGTCTGTTGAGCAGgtgagtgatgatgatgatagcccCAGCGGCAGCGGCGAGAGCGACATTGATAAAGAGCGTAATTCGGCGGAACAGCGGCTGGctgcgcggcgggcggcgcgggctgAAGCGAGAGAGATCCGCATGAGAGAGCTGGAGAGGCAGCAGAGAGAACAAGAGGACCATGCAGACAAGGCGTATGACATGTACGCAGAGACAGTCAGCAGAAGGGGTCCCCGTCTCGCGGCCCTCAGCCCGGCCGCGACGCTGTCGCCGCGACGCAGTTCAGAAGATTCTGCGGATGACACGTTTAGCATCAAAGACTTGAGGCATGAACTGAAAGAGGTGGAAGAGAAGTTCCGCAAGGCGATGATACTGAACGCACAACTGGACAACGACAAAGCGTCGCTCGGCTACCAGCTGGAACTGCTCAAGGACAGGATTGACGAGCTGCAGGAGGAACACGCACAATTACAGCGCGAGCACCGAGAGAAGTGTTCGGCACACGAGCGACTAAAGCGCGATCACGCGTGCGTGGAGCGGGAGCTGCAGCACGCGCGGGACGCGGTGTGCGCGCGcgacgcggcggcggcggcggccggcTACGTGTTCACGGAGGCGGGGGGAGGGACAGGGGCGGGGGGGGGAGCCGCCGTCGGCGCCGTGCCGCCGCTCGCGCTGCTCTCGCACGCCTCCAGTCTGCTGCTGGGAGACGGGGAGGAAACACTCGACGTGCGGTTGCAAAACCTGGTGAGCTCGAAGCAGGCCCTGGAGTCGGAGGTGCGCAAGCTGAAGCTCACGCTGAACGAGGAGCGCGCCGCGCGCCAGAACGGCGTCGCCAACCACCACGACGAGCACTACGAGAACGAACTGGAGCTGTCCCGCAAGGCGGCGCTAGAGGCGAAGGCGCGGGCGGGGCgcgcggaggcggaggcggcgctggcggcggcggcCGCGGCGCGCACCGAGGCGCAGCTGCAGCGTCTGCGCGCGCGCCAGCTGCACCACGACGACCTGGAGGAGCAGCTCAAGCAGGAGCGCAGGAAGCTGCAGCGAGAGGCGCGAGAAGCTCTCAACCGAGTAGAAGAGTTGGAGACTGAAAACAGTCACCTCACCAAGAGACTCGATAAACTCAAGAACGCCAAATCAGCACTGCTCAAGGAACTGTGA
- Protein Sequence
- MEHARPPAELSLEGGPANRAEAWQKWLRQFSVFLKASGVDKEKSDVKASLLVNLIGAEGYDVYTTFKYTKEEDKDSFDIIVRKFNAHFETKQNTTMARFKFFSRNQEEGESIDEYVTALKLLTQRCEFEHLEEGLVRDRIVCGVQDGKLRDRLLRADDLTLMRAVKICQANEMSTEEQRQIEGTKAAGGQVVAVDAMSARAYRAGAGGRGGAAGRARGGAGGTRQPQRAAWRGAQHQHQRGRGQDVVATSSRMCCSACGIATCDGYKCAAKNAMCFWCNERGHFKNMCPKLRKRVLQLDAAACAGAGAGAEDEDGGGGEDSDGLYYVSALSGTKESKDSKWYETLIFVSTGAQESFKLDSGSDLNVMSFSKFEKLGLSVNILNSDNTKEQSFCGNLIPIVGHCFLDCLYKNVNYKLRFIIADFDCQSVLGKYACEELGMLKRIMSINIDRYSDIFKGLGKLPGKYSIIVEKCAQPSVCPVRKIPIGVRDKLLQELVRMESMGVIRKVLHPTPWVNAIVVAAKKDGTIRVCLDPRPLNRVVRRAHYPLPTLTEIATKLEGAQYFSKLDARSGFWMVQLDDASADLCTFGTPFGRYQFLRLPYGINCASEVFHSKVRQILEDLEGVDSFIDDVIVWGSSKSQHDERLRKLLDRAREAGIKFNEKKCEFQVQKVSYLGHVFSADGMSIDRNKVRAIEDMPIPKDRPSLERFLGMINYLSKFIPNYSELALPLRNLLKKDSEWVWESAQEGAARALQRAVCAAPVLALYSAREPVLLSVDASSRALGAVLLQAGRPVEYASATLTDTQCRYAQIEKELLAIVFGLERFHQYVYGRRDVTVESDHKPLEALFKKSLDSVPARLQRMMLRIQGYHFTVIYKPGKYMYLADALSRAALPELMTDKVSEEVEEQSCFLIENVRFSASRLDIIKYAIINDIECQLLIKCIQQGWPESKYEVDERIRGQWSYRDSFGFIDGVLFKDNLVYIPKCVRTEMLNRLHDGHMGIDRCKRHAREVMFWPGISRDVEAMVRRCRACAERAPRATREPLMPHHIPPLPWSKVGSDIFQYGGKYFLILVDYFSNFVEVNPLTSIGTKAVVSAMRDQFARHGVPQELITDNGPAYSSKEFGEFSKMWGFKHTTSSPNYAQSNGQSERCIQTIKNILIKSSNSGTDFYLGLLNYRATPRNGISSPSELLMGRRLNTRLPSHVSKLIPSRDNEKDYNGMLRNQHVDKAYYDRRAKQLPELSPGQPVLVTDEGKRKRARIIGRAAGPRSYFVADSSGRQFRRNRRHLLKLPTVKEESSLSPSVEQVSDDDDSPSGSGESDIDKERNSAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVSRRGPRLAALSPAATLSPRRSSEDSADDTFSIKDLRHELKEVEEKFRKAMILNAQLDNDKASLGYQLELLKDRIDELQEEHAQLQREHREKCSAHERLKRDHACVERELQHARDAVCARDAAAAAAGYVFTEAGGGTGAGGGAAVGAVPPLALLSHASSLLLGDGEETLDVRLQNLVSSKQALESEVRKLKLTLNEERAARQNGVANHHDEHYENELELSRKAALEAKARAGRAEAEAALAAAAAARTEAQLQRLRARQLHHDDLEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -