Basic Information

Insect: Colletes gigas
Gene Symbol: ZNF236
Assembly: GCA_013123115.1
Location: WUUM01000003.1:5269333-5279906[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.00022 0.016 15.5 1.4 2 23 175 196 174 196 0.96

2 26 0.00011 0.0077 16.5 1.1 1 23 202 224 202 224 0.98

3 26 7.5e-06 0.00054 20.1 0.3 2 23 230 251 230 251 0.97

4 26 0.0075 0.55 10.6 0.2 3 23 259 279 257 279 0.96

5 26 0.00048 0.035 14.4 0.5 2 23 290 311 290 311 0.98

6 26 7.5e-07 5.5e-05 23.2 1.1 1 23 332 354 332 354 0.99

7 26 5.9e-06 0.00043 20.4 0.7 1 20 360 379 360 382 0.95

8 26 2e-05 0.0015 18.7 0.5 1 23 388 411 388 411 0.95

9 26 0.0027 0.19 12.1 2.2 3 23 422 443 420 443 0.97

10 26 1.4e-06 0.0001 22.4 2.0 1 23 569 591 569 591 0.98

11 26 0.00056 0.041 14.2 2.2 1 23 597 619 597 619 0.99

12 26 0.031 2.3 8.7 2.3 1 23 625 647 625 647 0.97

13 26 0.0049 0.36 11.2 6.7 1 23 734 756 734 756 0.98

14 26 4.3e-05 0.0031 17.7 4.7 1 23 762 784 762 784 0.99

15 26 8.2e-05 0.006 16.8 0.8 3 23 792 812 790 812 0.97

16 26 0.00029 0.021 15.1 7.5 1 23 818 840 818 840 0.98

17 26 0.15 11 6.6 1.0 2 23 1230 1251 1229 1251 0.96

18 26 0.00013 0.0091 16.2 3.5 1 23 1257 1279 1257 1279 0.99

19 26 0.00041 0.03 14.6 2.2 2 23 1286 1307 1285 1307 0.97

20 26 1e-07 7.6e-06 25.9 1.4 2 23 1387 1408 1386 1408 0.98

21 26 0.00074 0.054 13.8 3.5 1 23 1414 1436 1414 1436 0.99

22 26 0.0012 0.084 13.2 3.9 1 23 1442 1464 1442 1464 0.97

23 26 0.00052 0.037 14.3 2.6 1 23 1470 1492 1470 1492 0.98

24 26 1.5e-05 0.0011 19.1 0.3 2 23 1715 1736 1714 1736 0.97

25 26 0.00011 0.0082 16.4 2.7 1 23 1742 1764 1742 1764 0.98

26 26 7.9e-07 5.7e-05 23.2 1.6 1 23 1770 1793 1770 1793 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.00022	0.016	15.5	1.4	2	23	175	196	174	196	0.96
2	26	0.00011	0.0077	16.5	1.1	1	23	202	224	202	224	0.98
3	26	7.5e-06	0.00054	20.1	0.3	2	23	230	251	230	251	0.97
4	26	0.0075	0.55	10.6	0.2	3	23	259	279	257	279	0.96
5	26	0.00048	0.035	14.4	0.5	2	23	290	311	290	311	0.98
6	26	7.5e-07	5.5e-05	23.2	1.1	1	23	332	354	332	354	0.99
7	26	5.9e-06	0.00043	20.4	0.7	1	20	360	379	360	382	0.95
8	26	2e-05	0.0015	18.7	0.5	1	23	388	411	388	411	0.95
9	26	0.0027	0.19	12.1	2.2	3	23	422	443	420	443	0.97
10	26	1.4e-06	0.0001	22.4	2.0	1	23	569	591	569	591	0.98
11	26	0.00056	0.041	14.2	2.2	1	23	597	619	597	619	0.99
12	26	0.031	2.3	8.7	2.3	1	23	625	647	625	647	0.97
13	26	0.0049	0.36	11.2	6.7	1	23	734	756	734	756	0.98
14	26	4.3e-05	0.0031	17.7	4.7	1	23	762	784	762	784	0.99
15	26	8.2e-05	0.006	16.8	0.8	3	23	792	812	790	812	0.97
16	26	0.00029	0.021	15.1	7.5	1	23	818	840	818	840	0.98
17	26	0.15	11	6.6	1.0	2	23	1230	1251	1229	1251	0.96
18	26	0.00013	0.0091	16.2	3.5	1	23	1257	1279	1257	1279	0.99
19	26	0.00041	0.03	14.6	2.2	2	23	1286	1307	1285	1307	0.97
20	26	1e-07	7.6e-06	25.9	1.4	2	23	1387	1408	1386	1408	0.98
21	26	0.00074	0.054	13.8	3.5	1	23	1414	1436	1414	1436	0.99
22	26	0.0012	0.084	13.2	3.9	1	23	1442	1464	1442	1464	0.97
23	26	0.00052	0.037	14.3	2.6	1	23	1470	1492	1470	1492	0.98
24	26	1.5e-05	0.0011	19.1	0.3	2	23	1715	1736	1714	1736	0.97
25	26	0.00011	0.0082	16.4	2.7	1	23	1742	1764	1742	1764	0.98
26	26	7.9e-07	5.7e-05	23.2	1.6	1	23	1770	1793	1770	1793	0.97

Sequence Information

Coding Sequence: ATGGAAGTAAAGATGTTGACACGGCACGGTATAATCACAGAGTCTTCTCACGTCGAGGCAGTGCCGATAAATTTGGTTGCTACCGAAGATGGCCGAACGCTTTTAGCAGTGACAGaacacAAAGACGGTATGTTGGAAATCGTTGCAACTCCGGTCACGCTCATCGGTCAAAGTGGCATGGCCACTTCGTTGATGGATGTGAAAAATTTGAGTGGAAATTTGATACTGCAATCTCCTGGATTTCACATCAGCTTGGAAGACATAGATGGATCAGTGTTCCAACAGTCGCAGCAGAATTTCGAAATCGATCCTGATATTCCTGAACCGGATAAATCGCGATCGCATTTTGATGCAAAACACGAAACTTCCTTCGCCTGTCATTCTATCGATAACGATTTGTTATTCAACGAAAAGGATAGCGAAATTCAAAACGAAGCACAGTCGACTATtgtgacaaaaaaaaatagcccTGGAAGACCCAGAAAAAGCACCTCGATTTCTTCCAAAGGCAAAGAGAGTTTAAGATGCGATATATGCCAGCAAGAATTCACCAAACAAACATTGTACAAAAGACACATGGAAAATCATGCGGAGGAGAAACCACATCGATGTCCAAAATGTTCAGCCTCGTTCAATGTACCGACCAATTTCACGCTCCATATGGCAACGCACAACACTGGCGAACCAAAATGTCCCGAATGTGGTCGAAAGTTCGCAAGAATGGCAAGCCTGAAGTCTCACATGTTATTGCACGAGAAAGAAGAGAATTTGTTCTGCACAGAATGCGAAGATGCTTTCTCGACCAAAGCTCAATTGGATGCTCATTTGAAACTTCACGGAGAGAAATGGATAACCGAAGAAGCACGAAAGTGCAAACTGTGTAATAAACAGTTTGGTCAACCGGCTCTGTACAGGCTTCATATTCGTGAACATTACAGGTTACAGACAAAAATAGTGAAACAGACGAAGAGGGGAGCGAAACACAAGACAATGTACAAATGTACGATATGCTTAAAGTCCTTCCAGAAGCCAAGCCAATTGATGCGTCATATTAGGGTTCATACGGGTGAAAAACCTTTCAAGTGCACAGTATGCGGTCGCGCGTTTACACAGAAGAGCTCTCTGCAAATTCACACGTGGCAGCACAATGGTATCCGACCGCACGCGTGCGAGCTTTGTAACGCAAAATTCAGTCAGAAAGGTAATTTGAATGCTCATATAATGAGAGTCCACAACGTGCCAGAGGGAGAACCTATATATGGATGCAATTATTGTTCGTGCGTATTTAAAAAGCTTGGCAGTTTAAACGGTCACATGAAACGCATGCACATGGATGTGAACGAGGAGATCGTCACCGTCGACGACGCGGAATCGGCCGACGCGATGGAGTCCGACATCCGCGCCACCGTGGACAACGTTATGACCCAACTGGCATCGTTGGAGTCGAGCGTGAACGAGATAAGAAAACCGACGAACGTGGACGCGAGCATGTTGTCGGGAATGGCGACGAAAAAGGATATCTTGCAGCAGGCGTTGAAAAACAGCGGTCTTCCCAGTAAAAACAAAACCGTCTGCGAAGGTACATTGGAAACGAAGAAGCTCGGGACTCGTACTAATTTCGTCACCTTGTTGGACCGTGGACCGGATGGCGGCACCAGaaaatatttgacgaTAAAGCAACGTTGCGTGGGAAACGCGAGGTGGTACGCGTGCAACTTCTGTCACAAGGAATTCAAGAAACCGTCGGACTTGATACGCCATTTGCGCGTGCACACGCAAGAAAAACCTTTCAAGTGTGCACACTGTTATCGTTCGTTTGCTTTGAAGTCTACAATGATAGCGCACGAACGCACCCACACCAGTACCAAAAGATATGCTTGCAGCTCTTGCGATAAAACATTTGCGTGCCATGGTAGTTTAGTTGCCCATACCAGATTGCACGCGAAATCTAAGGATTATTTCGGGAAAGCTGTTGGCAACGATGAGAACGTCAGTGTATTAGACGTTTCCTCTAACAACAAGCCTAAAACCCAGTCGAAGAGCAAGTCAAAGATATCGCCGGAGGCGGAGAGTCTGGTGCGCCAAGTGGTGTTGGAGGAACCATTGGTGATCAGCGACACTGGTAACAAAATCTGCGTCGCTCGGGTACCTTCCAAGGAGAAAAGAGCCTTCGACGCGGCGACCGATCCAGCCAGACCGCACAAATGTTGGGTGTGCCAAGCTGCGTTCAGAAAAATCAGTCACCTGAAGCAACACCATCGTCGACACACTGGAGAACGTCCGTACACATGCACCAAGTGCGACAGGAGATTCACGTCGAACAGCGTCCTGAAGTCTCATCTCCACACGCACGAGGATTCGAGGCCGTACGGTTGTTCCATCTGCAACGCGAAGTTCTCAACGCAAAGTAGCATGAAGAGACATCTAGTTACCCACAGCAACAAAAGGCCGTACATGTGCCCGTATTGTCACAAGACGTTCAAGACTTACGTAAATTGCCGGAAGCATATGAAAATACACAAGCACGAGTTGGCGCAACGGCAATTGGAGGAACAAAAGAGCGGAATGCGTGAACGTGACACGGACAAGATGAACGCCAGAGAATGTTCGAAACAGGGAACAGCTACGGGGACGTCTGGTTCCCCGTCCGATTTCACAGCTACCAACACCACTGCCGTCGCTATGGCCACGTCTACCGCGACAATCGTCACGTCTCCGTCGTCCACGTTCTCTGATAATCTTGCACTGTCTCGTCTGGGGCCAGTGGAGATATCTTTTCAACCACATATGGGAACAGACTTCTCCCAAGCTTTCCCCGATCAATTTCAACAGGTAACCGGGGACAAGGACAGAATGAGGTCGCTTTTACCAACAAGCTGCGACACTTCGACAATCATCAACCAGAACATGTCGGAAGTGGCGGTAACGAATCTTGAAAATTCGCAGATGTTACACGCTGACGAGGCTGGTTCGGTTACGTTACCCGTTTATTCTACAGAGCAAGCTCTCACACCGGAGAGCATACGAGAAATAGAAGAAACATTGAATCAGCAGCTGTTTAACATGGGGATGAATCTCAGTCTAGGCAGTAATCATTCGAAGCATTTAAGCGGTGCTAACAACGATCTTGATAATTCGAAAGAACAAGAACAACCTGTGTTGAATGTTATCTACGAgaataacaacaacaacagcagcaacaataTGGAGTCGTCCGGGGATCATGTGTTCGCGTCGCAGTTAGACTCGTTTGAGATGGATCACATCACGTTGCAAGCGGACACTGAAATTGGCCTGGACAGTATCGGATTGAATGCGAGTAATTCGACGAGTATGGCGAGTATCCTGCCTAGAACCGCGAAGGAGGAACACCGTCTCTCCGTTTCCGTTACGTCGCACGAGAATATGAACAGTGACCAATCTGGTAGGTGTATGCAGACGGTAGTGCTCATTTCGGAGCAAACTCTTTCAGGCAAGGAAGGTACGGCGAACGAACTGGAAATGGAAGAGACAGATAGAGATACTGGCCAGGAACGATGCACGATCGATCGTATACTCTTAACAGAAGAGTATCGAGGAACGACGCACGATTCGAAGGTTCCGTTAAAGGTGCACCCGATGCCGTCCGAGATCCCAGGAACCATCGATACCAATCAGAGCCAGGTATCGCCGGGAGAGTCTCTGTTGCAGTGTCATATGTGTAGTCAGCAAGGATTTACGGCAACCGGGCTAAAGGAACACTTGAAGATTCATCGTGGGACGAAGGAGTACCAGTGTACGGAATGTTCGTTAAGGTTCTGCACAAACGGTGGACTGAACAGGCATTCGAAGACACATGTGAACAAACAACCGTGGAAGTGTCAGTCCTGTGATAAGTACTTCAATAATAGAACACAGCTTCGATCGCACAGCAGGATACACGAGACCTCGACATGGAACGCTATTTCGTCGGAAATGAACACCGCCGCTTCGGAAAATTCGGTTTCGTCGGAGATGAGGACGGTCGTAGCTGCTGATTCGTTGCTGAACGATATTGTGATAGAGCCGGATTCCACCGTGTCCGAGAGAGTCCTGCTGGACACGGTAGCGGAGAAGGAAGTGATGGATAGACTAAAAaaCGTTTTGATGGAGAAGAAGGTTCGAAAGGAGTATACGAACAAGTGCAAATACTGTCCAAAAACGTTTCGTAAACCCAGCGATCTGATAAGGCACGTACGAACGCACACTGGCGAACGGCCGTACAAATGCGATTATTGCAGCAAAAGTTTCGCCGTGAAGTGCACCTTGGACTCGCACACGAAAGTTCACACGGGGAAGAAAACGTTTTGTTGTCACGTTTGCAACAGTCTGTTCGCGACGAAGGGCAGCCTGAAAGTTCACATGCGATTGCACACAGGTTCGAAACCATTCAAATGCCCTGTCTGCGATTCGAGATTTCGAACCTCGGGTCACAGGAAGGTGCATTTACTGAAGCACGCGCGAGAGCACAAGGGCAGTCCCAAAAGGAAACAGAGGCACATGAAAGTCGCCGCCATAGCGGAGGTCGTGGCTGACATCACAAAGTGCAACGACACGGGCGAGGAGAAGATGAACAGCTTTGCGCAGGAGCAGCAACTGCAACACGAGCAACTGGCGCAGACAGCCACGACAGACTACCCCCACTTGGAGACGATCAGCGTGGACACAGCCACTGCCTGCTTGGCCGACCAAATCACCTTCGACGCCGACGGTACCGCCATACAGAATGGTAATCCGGTGCTATCGGTAACGGAGGGCAATCAGTTGGTAGCGAACTTGAATTTCCTTCTGGCGAACGGTCTCGTCACCATTCAAACCGAGGAATCGTTATTGCCCCAATCCCCACCCACTATGTCTCACAATCGTTCCACGATGGTCACCGAGCCCGCGTGCGTGTCCACTCTGAACATCGCGTCTGGGAACGGGAACGACGAGGCCAAGGAAACCATTCACATAGGGCAAATGCTGAAAGCACAATTATCGCCGTATCAGCTCCAATCGAATAATTGTCTGTTAACCGTGGCAGCCTCCGCGCAGTTGGAACCGTTCGCGAAAGTCGCGACTCTCGAGAAGCCCTTGTCGACGCCGGGCAAACCAACCGCGAAAGGTAACTCGTCCAAGAAGGAGTGCGACGTTTGCGGGAAAACGTTCATCAAGCCGTATCAGGTCGAACGACACAAACGAATCCACACGGGCGAACGACCGTACAAGTGCGAGTTGTGCGCGAAATCGTTCGCTCAGAAATCAACCTTGCAGATGCACGAGAAACACCACACGGGTGATCGACCATATCCGTGCCCCCATTGCGAATATTCCTTCACGCAGAAAGGCAACCTTCGAACCCACGTGAAGCGGGTTCATCAGCTGGACACCGTGGAcgcgaagaaattgaaacgcaCGCGTCAAACCTTTCTCCCCAAGACGCTTCAGGATAGCTTCACCGAGTCGAAGAGTCTCAATTTGGATGATATATCGTTCGTTGAATTCCTCAAGTAA
Protein Sequence: MEVKMLTRHGIITESSHVEAVPINLVATEDGRTLLAVTEHKDGMLEIVATPVTLIGQSGMATSLMDVKNLSGNLILQSPGFHISLEDIDGSVFQQSQQNFEIDPDIPEPDKSRSHFDAKHETSFACHSIDNDLLFNEKDSEIQNEAQSTIVTKKNSPGRPRKSTSISSKGKESLRCDICQQEFTKQTLYKRHMENHAEEKPHRCPKCSASFNVPTNFTLHMATHNTGEPKCPECGRKFARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWITEEARKCKLCNKQFGQPALYRLHIREHYRLQTKIVKQTKRGAKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTVCGRAFTQKSSLQIHTWQHNGIRPHACELCNAKFSQKGNLNAHIMRVHNVPEGEPIYGCNYCSCVFKKLGSLNGHMKRMHMDVNEEIVTVDDAESADAMESDIRATVDNVMTQLASLESSVNEIRKPTNVDASMLSGMATKKDILQQALKNSGLPSKNKTVCEGTLETKKLGTRTNFVTLLDRGPDGGTRKYLTIKQRCVGNARWYACNFCHKEFKKPSDLIRHLRVHTQEKPFKCAHCYRSFALKSTMIAHERTHTSTKRYACSSCDKTFACHGSLVAHTRLHAKSKDYFGKAVGNDENVSVLDVSSNNKPKTQSKSKSKISPEAESLVRQVVLEEPLVISDTGNKICVARVPSKEKRAFDAATDPARPHKCWVCQAAFRKISHLKQHHRRHTGERPYTCTKCDRRFTSNSVLKSHLHTHEDSRPYGCSICNAKFSTQSSMKRHLVTHSNKRPYMCPYCHKTFKTYVNCRKHMKIHKHELAQRQLEEQKSGMRERDTDKMNARECSKQGTATGTSGSPSDFTATNTTAVAMATSTATIVTSPSSTFSDNLALSRLGPVEISFQPHMGTDFSQAFPDQFQQVTGDKDRMRSLLPTSCDTSTIINQNMSEVAVTNLENSQMLHADEAGSVTLPVYSTEQALTPESIREIEETLNQQLFNMGMNLSLGSNHSKHLSGANNDLDNSKEQEQPVLNVIYENNNNNSSNNMESSGDHVFASQLDSFEMDHITLQADTEIGLDSIGLNASNSTSMASILPRTAKEEHRLSVSVTSHENMNSDQSGRCMQTVVLISEQTLSGKEGTANELEMEETDRDTGQERCTIDRILLTEEYRGTTHDSKVPLKVHPMPSEIPGTIDTNQSQVSPGESLLQCHMCSQQGFTATGLKEHLKIHRGTKEYQCTECSLRFCTNGGLNRHSKTHVNKQPWKCQSCDKYFNNRTQLRSHSRIHETSTWNAISSEMNTAASENSVSSEMRTVVAADSLLNDIVIEPDSTVSERVLLDTVAEKEVMDRLKNVLMEKKVRKEYTNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFCCHVCNSLFATKGSLKVHMRLHTGSKPFKCPVCDSRFRTSGHRKVHLLKHAREHKGSPKRKQRHMKVAAIAEVVADITKCNDTGEEKMNSFAQEQQLQHEQLAQTATTDYPHLETISVDTATACLADQITFDADGTAIQNGNPVLSVTEGNQLVANLNFLLANGLVTIQTEESLLPQSPPTMSHNRSTMVTEPACVSTLNIASGNGNDEAKETIHIGQMLKAQLSPYQLQSNNCLLTVAASAQLEPFAKVATLEKPLSTPGKPTAKGNSSKKECDVCGKTFIKPYQVERHKRIHTGERPYKCELCAKSFAQKSTLQMHEKHHTGDRPYPCPHCEYSFTQKGNLRTHVKRVHQLDTVDAKKLKRTRQTFLPKTLQDSFTESKSLNLDDISFVEFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00360352;
90% Identity: iTF_00360352;
80% Identity: -