Basic Information

Insect: Colletes collaris
Gene Symbol: ZNF236
Assembly: GCA_030068185.1
Location: JASGYR010000079.1:1419792-1430258[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.00027 0.032 15.5 1.4 2 23 171 192 170 192 0.96

2 26 0.00013 0.015 16.5 1.1 1 23 198 220 198 220 0.98

3 26 9.1e-06 0.0011 20.1 0.3 2 23 226 247 226 247 0.97

4 26 0.0092 1.1 10.6 0.2 3 23 255 275 253 275 0.96

5 26 0.00059 0.071 14.4 0.5 2 23 286 307 286 307 0.98

6 26 9.2e-07 0.00011 23.2 1.1 1 23 328 350 328 350 0.99

7 26 7.3e-06 0.00087 20.4 0.7 1 20 356 375 356 378 0.95

8 26 2.5e-05 0.0029 18.7 0.5 1 23 384 407 384 407 0.95

9 26 0.0033 0.39 12.1 2.2 3 23 418 439 416 439 0.97

10 26 1.7e-06 0.00021 22.4 2.0 1 23 565 587 565 587 0.98

11 26 0.00068 0.082 14.2 2.2 1 23 593 615 593 615 0.99

12 26 0.038 4.6 8.7 2.3 1 23 621 643 621 643 0.97

13 26 0.0061 0.73 11.2 6.7 1 23 730 752 730 752 0.98

14 26 5.3e-05 0.0063 17.7 4.7 1 23 758 780 758 780 0.99

15 26 0.0001 0.012 16.8 0.8 3 23 788 808 786 808 0.97

16 26 0.00035 0.042 15.1 7.5 1 23 814 836 814 836 0.98

17 26 0.18 22 6.6 1.0 2 23 1226 1247 1225 1247 0.96

18 26 0.00015 0.018 16.2 3.5 1 23 1253 1275 1253 1275 0.99

19 26 0.0005 0.06 14.6 2.2 2 23 1282 1303 1281 1303 0.97

20 26 1.3e-07 1.5e-05 25.9 1.4 2 23 1383 1404 1382 1404 0.98

21 26 0.00091 0.11 13.8 3.5 1 23 1410 1432 1410 1432 0.99

22 26 0.0014 0.17 13.2 3.9 1 23 1438 1460 1438 1460 0.97

23 26 0.00063 0.076 14.3 2.6 1 23 1466 1488 1466 1488 0.98

24 26 1.8e-05 0.0022 19.1 0.3 2 23 1711 1732 1710 1732 0.97

25 26 0.00014 0.017 16.4 2.7 1 23 1738 1760 1738 1760 0.98

26 26 9.6e-07 0.00012 23.2 1.6 1 23 1766 1789 1766 1789 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.00027	0.032	15.5	1.4	2	23	171	192	170	192	0.96
2	26	0.00013	0.015	16.5	1.1	1	23	198	220	198	220	0.98
3	26	9.1e-06	0.0011	20.1	0.3	2	23	226	247	226	247	0.97
4	26	0.0092	1.1	10.6	0.2	3	23	255	275	253	275	0.96
5	26	0.00059	0.071	14.4	0.5	2	23	286	307	286	307	0.98
6	26	9.2e-07	0.00011	23.2	1.1	1	23	328	350	328	350	0.99
7	26	7.3e-06	0.00087	20.4	0.7	1	20	356	375	356	378	0.95
8	26	2.5e-05	0.0029	18.7	0.5	1	23	384	407	384	407	0.95
9	26	0.0033	0.39	12.1	2.2	3	23	418	439	416	439	0.97
10	26	1.7e-06	0.00021	22.4	2.0	1	23	565	587	565	587	0.98
11	26	0.00068	0.082	14.2	2.2	1	23	593	615	593	615	0.99
12	26	0.038	4.6	8.7	2.3	1	23	621	643	621	643	0.97
13	26	0.0061	0.73	11.2	6.7	1	23	730	752	730	752	0.98
14	26	5.3e-05	0.0063	17.7	4.7	1	23	758	780	758	780	0.99
15	26	0.0001	0.012	16.8	0.8	3	23	788	808	786	808	0.97
16	26	0.00035	0.042	15.1	7.5	1	23	814	836	814	836	0.98
17	26	0.18	22	6.6	1.0	2	23	1226	1247	1225	1247	0.96
18	26	0.00015	0.018	16.2	3.5	1	23	1253	1275	1253	1275	0.99
19	26	0.0005	0.06	14.6	2.2	2	23	1282	1303	1281	1303	0.97
20	26	1.3e-07	1.5e-05	25.9	1.4	2	23	1383	1404	1382	1404	0.98
21	26	0.00091	0.11	13.8	3.5	1	23	1410	1432	1410	1432	0.99
22	26	0.0014	0.17	13.2	3.9	1	23	1438	1460	1438	1460	0.97
23	26	0.00063	0.076	14.3	2.6	1	23	1466	1488	1466	1488	0.98
24	26	1.8e-05	0.0022	19.1	0.3	2	23	1711	1732	1710	1732	0.97
25	26	0.00014	0.017	16.4	2.7	1	23	1738	1760	1738	1760	0.98
26	26	9.6e-07	0.00012	23.2	1.6	1	23	1766	1789	1766	1789	0.97

Sequence Information

Coding Sequence: ATGTTGACACGGCACGGTATAATCACAGAGTCTTCTCACGTCGAGGCAGTGCCGATAAATTTGGTTGCTACCGAAGATGGCCGAACGCTTTTAGCAGTGACAGaacaCAAAGACGGTATGTTGGAAATCGTTGCAACTCCGGTCACGCTCATCGGTCAAAGTGGCATGGCCACTTCGTTGATGGATGTGAAAAATTTGAGTGGAAATTTGATACTGCAATCTCCTGGATTTCACATCAGCTTGGAAGACATAGACGGTTCAGTGTTCCAACAGTCGCAGCAGAATTTTGAAATCGATCCTGATATTCCTGAACCGGATAAATCGCGATCGCATTTTGATGCAAAACACGAAACTTCCTTCGCCTGTCATTCTATCGATAACGATTTGTTATTCAACGAGAAGGATAGCGAAATTCAAAACGAAGCACAGTCGACTATcgtgacaaaaaaaaatagCCCTGGAAGACCCAGAAAAAGCACCTCGATTTCTTCCAAAGGCAAAGAGAGTTTAAGATGCGATATATGCCAGCAAGAATTCACCAAACAAACATTGTACAAAAGACACATGGAAAATCATGCGGAGGAGAAACCACATCGATGTCCAAAATGTTCAGCCTCGTTCAATGTACCGACCAATTTCACGCTCCATATGGCAACGCACAACACGGGCGAACCAAAATGTCCCGAATGTGGTCGAAAATTCGCAAGAATGGCTAGCTTGAAGTCTCACATGTTATTGCACGAGAAAGAAGAGAATTTGTTCTGCACAGAATGCGAAGATGCTTTCTCGACCAAAGCTCAATTGGATGCTCATTTGAAACTTCACGGAGAGAAATGGATAACCGAAGAAGCACGAAAGTGCAAACTGTGTAATAAACAGTTTGGTCAACCGGCTCTGTACAGGCTTCATATTCGTGAACATTACAGGTTACAGACAAAAATAGTGAAACAGACGAAGAGGGGAGCGAAACACAAGACAATGTACAAATGTACGATATGCTTAAAGTCCTTCCAGAAGCCAAGCCAATTGATGCGTCATATTAGGGTTCATACGGGTGAAAAACCTTTCAAGTGCACAGTATGCGGTCGCGCGTTTACACAGAAGAGCTCTCTGCAAATTCACACGTGGCAGCACAATGGTATCCGACCGCACGCGTGCGAGCTTTGTAACGCAAAATTCAGTCAGAAAGGTAATTTGAATGCTCATATAATGAGAGTCCACAACGTGCCAGAGGGAGAACCTATATATGGATGCAATTATTGTTCGTGCGTATTTAAAAAGCTTGGCAGTTTAAACGGTCACATGAAACGCATGCACATGGATGTGAACGAGGAGATCGTCACCGTCGACGACGCGGAATCGGCCGACGCGATGGAGTCCGACATCCGCGCCACCGTGGACAACGTTATGACCCAACTGGCATCGTTGGAGTCGAGCGTGAACGAGATAAGAAAACCGACGAACGTGGACGCGAGCATGTTGTCGGGAATGGCGACGAAAAAGGATATCTTGCAGCAGGCGTTGAAAAACAGCGGTCTTCCCAGTAAAAACAAAACCGTCTGCGAAGGTACATTGGAAACGAAGAAGCTCGGGACTCGTACTAATTTCGTCACCTTGTTGGACCGTGGACCGGATGGCGGCACCAGAAAATATTTGACGATAAAGCAACGTTGCGTGGGAAACGCGAGGTGGTACGCGTGCAACTTCTGTCACAAGGAATTCAAGAAACCGTCGGACTTGATACGCCATTTGCGCGTGCACACGCAAGAAAAACCTTTCAAGTGTGCACACTGTTATCGTTCGTTTGCTTTGAAGTCTACAATGATTGCGCACGAACGCACCCACACCAGTACCAAAAGATATGCTTGCAGCTCTTGCGATAAAACATTTGCGTGCCATGGTAGTTTAGTTGCCCATACCAGATTGCACGCGAAATCTAAGGATTATTTCGGGAAAGCTGTTGGCAACGATGAGAACGTCAGTGTATTAGACGTTTCCTCTAACAACAAGCCTAAAACCCAGTCGAAGAGCAAGTCGAAGATATCACCGGAGGCGGAGAGTCTGGTGCGCCAAGTGGTGTTGGAGGAACCATTGGTGATCAGCGACACCGGTAACAAAATCTGTGTCGCTCGGGTACCTTCCAAGGAGAAAAGAGCCTTCGACGCGGCGACCGATCCAGCCAGACCCCACAAATGTTGGGTGTGCCAAGCTGCGTTCAGAAAAATCAGTCACCTGAAGCAACACCATCGTCGACACACTGGAGAACGTCCGTACACATGCACCAAGTGCGACAGGAGATTCACGTCGAACAGCGTCCTGAAGTCTCATCTCCACACGCACGAGGACTCGAGGCCGTACGGTTGTTCCATCTGCAACGCGAAGTTCTCAACGCAAAGTAGCATGAAGAGACATCTAGTTACCCACAGCAACAAAAGGCCGTACATGTGCCCGTATTGTCACAAGACGTTCAAGACTTACGTAAATTGCCGGAAGCATATGAAAATACACAAGCACGAGCTGGCGCAACGGCAATTGGAGGAACAAAAGAGCGGAATGCGTGAACGTGACACGGACAAGTTGAACGCCAGAGAATGTTCGAAACAGGGAACAGCTACGGGGACGTCTGGTTCCCCGTCCGATTTCACAGCTACCAACACCACTGCCGTCGCTATGGCCACGTCTACCGCGACAATCGTCACGTCACCGTCGTCCACGTTCTCTGATAATCTTGCACTGTCTCGTCTGGGGCCAGTGGAGATATCTTTTCAACCACATATGGGAACAGACTTCTCCCAAGCTTTCCCTGATCAATTTCAACCTGTAACCGGGGACAAGGACAGAATGAGGTCGCTTTTACCAACAAGCTGCGACACTTCGACAATCATCAACCAGAACATGTCGGAAGTGGCGGTAACGAATCTTGAAAATTCGCAGATGTTACACGCTGACGAGGCTGGTTCGGTTACGTTACCCGTTTATTCTACAGAGCAAGCTCTCACACCGGAGAGCATACGAGAAATAGAGGAAACATTGAATCAGCAGCTGTTTAACATGGGGATGAATCTCAGTCTAGGCAGTAATCATTCGAAGCATTTAAGCGGTGCTAACAACGATCTTGATAATTCGAAAGAACAAGAACAACCTGTGTTGAATGTTATCTACGagaataacaacaacaacagcagcaacaataTGGAGTCGTCCGGGGATCATGTGTTCGCGTCGCAGTTAGACTCGTTTGAGATGGATCACATCACGTTGCAAGCGGACACTGAAATTGGCCTGGACAGTATCGGATTGAATGCGAGTAATTCGACGAGTATGGCGAGTATCCTGCCTAGAACCGCGAAGGAGGAACACCGTCTCTCCGTTTCCGTTACGTCGCACGAGAATATGAACAGTGACCAATCTGGTAGGTGTATGCAGACGGTAGTGCTCATTTCGGAGCAAACTCTTTCAGGCAAGGAAGGTACGGCGAACGAACTGGAAATGGAAGAGACAGATAGAGATACTGGCCAGGAACGATGCACGATCGATCGTATACTCTTAACAGAAGAGTATCGAGGAACGACGCACGATTCGAAGGTTCCGTTAAAGGTGCACCCGATGCCGTCCGAGATCCCAGGAACCATCGATACCAATCAGAGCCAGGTATCGCCGGGAGAGTCTCTGTTGCAGTGTCATATGTGTAGTCAGCAAGGATTTACGGCAACCGGGCTAAAGGAACACTTGAAGATTCATCGTGGGACGAAGGAGTACCAGTGTACGGAATGTTCGTTAAGGTTCTGCACAAACGGTGGACTGAACAGGCATTCAAAGACACATGTGAACAAACAACCGTGGAAGTGTCAGTCCTGTGATAAGTACTTCAATAATAGAACACAGCTTCGATCGCACAGCAGGATACACGAGACCTCGACATGGAACGCTATTTCGTCGGAAATGAACACCGCCGCTTCGGAAAATTCGGTTTCGTCGGAGATGAGGACGGTCGTAGCTGCTGATTCGCTGTTGAACGATATTGTGATAGAGCCGGATTCCACCGTGTCCGAGAGAGTCCTGCTGGACACGGTAGCGGAGAAGGAAGTGATGGATAGACTAAAAAACGTTTTGATGGAGAAGAAGGTTCGAAAGGAGTATACGAACAAGTGCAAGTACTGTCCAAAAACGTTTCGTAAACCCAGCGATCTGATAAGGCACGTACGAACGCACACTGGCGAACGGCCGTACAAATGCGATTATTGCAGCAAAAGTTTCGCCGTGAAGTGCACCTTGGACTCGCACACGAAAGTTCACACGGGGAAGAAAACGTTTTGTTGTCACGTTTGCAACAGTCTGTTCGCGACGAAGGGCAGCCTGAAAGTTCACATGCGATTGCACACAGGTTCGAAACCATTCAAATGCCCTGTCTGCGATTCGAGATTTCGAACCTCGGGTCACAGGAAGGTGCATTTACTGAAGCACGCGCGAGAGCACAAGGGCAGTCCCAAAAGGAAACAGAGGCACATGAAAGTCGCCGCCATAGCGGAGGTCGTGGCTGACATCACAAAGTGCAACGACACGGGCGAGGAGAAGATGAACAGCTTTGCGCAGGAGCAGCAACTGCAACACGAGCAACTGGCGCAGACAGCCACGACAGACTACCCCCACTTGGAGACGATCAGCGTGGACACAGCCACTGCCTGCTTGGCCGACCAAATCACCTTCGACGCCGACGGTACCGCCATACAGAATGGTAATCCGGTGCTATCGGTAACGGAGGGCAATCAGTTGGTAGCGAACTTGAATTTCCTTCTGGCGAACGGTCTCGTCACCATTCAAACCGAGGAATCGTTATTGCCCCAATCCCCACCCACTATGTCCCACAATCGTTCCACGATGGTCACCGAGCCCGCGTGCGTGTCCACTCTGAACATAGCGTCTGGGAACGGGAACGACGAGGCCAAGGAAACCATTCACATAGGGCAAATGTTGAAAGCACAATTATCGCCGTATCAGCTCCAATCGAATAATTGTCTGTTAACCGTGGCAGCCTCCGCGCAGTTGGAACCGTTCGCGAAAGTCGCGACTCTCGAGAAGCCCTTGTCGACGCCGGGTAAACCAACCGCGAAAGGTAACTCGTCCAAGAAGGAGTGCGACGTTTGCGGGAAAACGTTCATCAAGCCGTATCAGGTCGAACGACACAAACGAATCCACACGGGCGAACGACCGTACAAGTGCGAGTTGTGCGCGAAATCGTTCGCTCAGAAGTCAACCTTGCAGATGCACGAGAAACACCACACGGGTGATCGACCATATCCGTGCCCCCATTGCGAATATTCCTTCACGCAGAAAGGCAACCTTCGAACCCACGTGAAGCGGGTTCATCAGCTGGACACCGTGGACGCGAAGAAATTGAAACGCACGCGTCAAACCTTTCTCCCCAAGACGCTTCAGGATAGCTTCACCGAGTCGAAGAGTCTCAATTTGGACGATATATCGTTCGTTGAATTCCTCAAGTAA
Protein Sequence: MLTRHGIITESSHVEAVPINLVATEDGRTLLAVTEHKDGMLEIVATPVTLIGQSGMATSLMDVKNLSGNLILQSPGFHISLEDIDGSVFQQSQQNFEIDPDIPEPDKSRSHFDAKHETSFACHSIDNDLLFNEKDSEIQNEAQSTIVTKKNSPGRPRKSTSISSKGKESLRCDICQQEFTKQTLYKRHMENHAEEKPHRCPKCSASFNVPTNFTLHMATHNTGEPKCPECGRKFARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWITEEARKCKLCNKQFGQPALYRLHIREHYRLQTKIVKQTKRGAKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTVCGRAFTQKSSLQIHTWQHNGIRPHACELCNAKFSQKGNLNAHIMRVHNVPEGEPIYGCNYCSCVFKKLGSLNGHMKRMHMDVNEEIVTVDDAESADAMESDIRATVDNVMTQLASLESSVNEIRKPTNVDASMLSGMATKKDILQQALKNSGLPSKNKTVCEGTLETKKLGTRTNFVTLLDRGPDGGTRKYLTIKQRCVGNARWYACNFCHKEFKKPSDLIRHLRVHTQEKPFKCAHCYRSFALKSTMIAHERTHTSTKRYACSSCDKTFACHGSLVAHTRLHAKSKDYFGKAVGNDENVSVLDVSSNNKPKTQSKSKSKISPEAESLVRQVVLEEPLVISDTGNKICVARVPSKEKRAFDAATDPARPHKCWVCQAAFRKISHLKQHHRRHTGERPYTCTKCDRRFTSNSVLKSHLHTHEDSRPYGCSICNAKFSTQSSMKRHLVTHSNKRPYMCPYCHKTFKTYVNCRKHMKIHKHELAQRQLEEQKSGMRERDTDKLNARECSKQGTATGTSGSPSDFTATNTTAVAMATSTATIVTSPSSTFSDNLALSRLGPVEISFQPHMGTDFSQAFPDQFQPVTGDKDRMRSLLPTSCDTSTIINQNMSEVAVTNLENSQMLHADEAGSVTLPVYSTEQALTPESIREIEETLNQQLFNMGMNLSLGSNHSKHLSGANNDLDNSKEQEQPVLNVIYENNNNNSSNNMESSGDHVFASQLDSFEMDHITLQADTEIGLDSIGLNASNSTSMASILPRTAKEEHRLSVSVTSHENMNSDQSGRCMQTVVLISEQTLSGKEGTANELEMEETDRDTGQERCTIDRILLTEEYRGTTHDSKVPLKVHPMPSEIPGTIDTNQSQVSPGESLLQCHMCSQQGFTATGLKEHLKIHRGTKEYQCTECSLRFCTNGGLNRHSKTHVNKQPWKCQSCDKYFNNRTQLRSHSRIHETSTWNAISSEMNTAASENSVSSEMRTVVAADSLLNDIVIEPDSTVSERVLLDTVAEKEVMDRLKNVLMEKKVRKEYTNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFCCHVCNSLFATKGSLKVHMRLHTGSKPFKCPVCDSRFRTSGHRKVHLLKHAREHKGSPKRKQRHMKVAAIAEVVADITKCNDTGEEKMNSFAQEQQLQHEQLAQTATTDYPHLETISVDTATACLADQITFDADGTAIQNGNPVLSVTEGNQLVANLNFLLANGLVTIQTEESLLPQSPPTMSHNRSTMVTEPACVSTLNIASGNGNDEAKETIHIGQMLKAQLSPYQLQSNNCLLTVAASAQLEPFAKVATLEKPLSTPGKPTAKGNSSKKECDVCGKTFIKPYQVERHKRIHTGERPYKCELCAKSFAQKSTLQMHEKHHTGDRPYPCPHCEYSFTQKGNLRTHVKRVHQLDTVDAKKLKRTRQTFLPKTLQDSFTESKSLNLDDISFVEFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00361056;
90% Identity: iTF_00361056;
80% Identity: -