Cgig013013.1
Basic Information
- Insect
- Colletes gigas
- Gene Symbol
- Myb_1
- Assembly
- GCA_013123115.1
- Location
- WUUM01000005.1:8487632-8498915[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-14 8.8e-12 44.8 0.2 1 45 57 106 57 107 0.92 2 3 2e-21 1.6e-18 66.3 1.8 1 46 113 159 113 159 0.98 3 3 2.4e-20 2e-17 62.8 0.3 1 44 165 208 165 210 0.96
Sequence Information
- Coding Sequence
- ATGAATAACGATCATTTGCGGAGGAAatcGCGGTCTGGGTACGATTCTAGTAGCGGCGGTGACTCTGACAACGAGTACAGTGGCAGCGTCTGTCGTGGGGTCGCTAATCAGTCACAGAATCCGGCCTCGACGAATGCGAGCACGCACGGGCAGGGGAAGCACATAAACAAAGGAAGGTGGACCAAAGAGGAGGATGCTTTATTGAAGCAGTTAGTGAGCAATGCGGAGCAACGGGGCACAGGACTCCGATGGGACGCCGTGGCTGGTCACTTCCCTGACCGGAGCGACGTCCAATGCCAGCAGAGATGGGCAAAGGTCGTGAATCCGGAGTTGGTCAAGGGACCTTGGACGAAAGAGGAGGATGAGGCAGTGGTGGAATTAGTGGAACGATACGGCCCAAAGAAGTGGACGTTAATTGCACGGCATCTGAAGGGTCGTATCGGTAAGCAGTGTCGGGAACGATGGCACAATCACTTGAATCCGGGAATCAAGAAGACCGCGTGGACGGAGGTGGAGGACAGGATCATCGTCGAGGCTCATCGCAGGGTGGGCAATCAGTGGGCAAAAATCGCCAAATTGCTGCCGGGGAGGACCGACAATGCGATTAAGAATCATTGGAACAGCACCATGAGGAGGAAGTACGAGTCGGAGGAGGGGAGGTCCATCACCGGATCCAGAGGGAGGGGTAGGAGAAAAGCCACAGAATCGTCGTCTGTGTCGAAGGATGTTGGTTGCGCGGATGAGGACGCCTCTAGTCACGGTCGCTTGAAACCACCATCGACTAGCAATGAAAACGCAACGTCTTTGACGAACGTGCAGGCCCATACACTGAACATCGACCAGCTGGACTGGACCAGGGCCTGGGACAATCATCAACAGAGCAGTCAAACCTACCAAGGTCTCCTCAGTCTCAACCAACGTACGCACAACACCGATTCTCGGCTGCAATCCCCCTCGAAACAAGGGACCTCGTCCACCAGAGTCAAGACTGAATCGATCTCGCCGTTTACCAAGTATTTTGATCTGCAAATACAAGGTGAACCGACCAGCTCAAGAAGTTCGGAGATAAGACTAATGCCTATGCCAGACTTGGACGAGATATCAAACATGGCGGAGAAGGAGAGAAGCAGTCCACCTCCGATTCTCCGTCGGCGCAAGAATACTCACCAGCAGAGAACGGGCTCTCCCGACAGTGGAAACCAGTCGGATTATATTATCATAACCCAACATCAGCCAGAGCAGCAGCACCatcagcagcagcagcagcaagaggagcagcagcagcaacaacagcagcagcaacagcaaacTGGCGACAATACCCCATCCACTCCTATCAAGCAACTGCCATTTAGTCCGTCGCAGTTCTTGAACAGTCTGAGTCCTGAAACATCCTCCTGGCCGAGGGCGAGTACCCCTAAGGGAAGCAGTCCTGGTCCTCTTACCACACCACAACCCACTGGTTTTCGACGAAGTCAGAATGACGGCAACACGCCGAGGACGCCAACGCCGTTCAAGAACGCTCTGGCCGAGCTGGAGCGGCGTAGCGGCGCGACTACTCAGTTACCTGCCACCCCCAGTCGTCTCGATGCTCTAACCGAGATCATCAAACAGGAAACCGACCGTGAGAGTTTGGCTGGGACCAGTGCCATCCTCCAGGACTCCGGTTACAGCACGATACGACGACGGGGCAAGGAGAACAGCGCCCCCGGCGGAAAGAGGGCCCGCAAAGCACTCTGTCAGGCCTGGGCGAATGCTTCTCAGGATAATTCAGAAATGAGTTTCGTTGTAGAAACACCAAGTAAAAGTTTGGACACATCGGTATTGTTTTCACCAGCATCCATGGCGTTGGAGGatagtttcttaacagcaggGACTAGTCCCGTGAAGACTTCCCACGACTTCGCGTCCGTTCAACGGAAGCCTAACGCCAAGAGGGCGATCACGTTCGACGCGTTCGACAGTCCCTGCTGTATCCTCAGCCCTCTGCCGCTCAGGCCGGTTAAACGCGCCAAGCTACAGTTAGAGGCACAATGGACAATGGTGGCCTGCGGACGCACACGCGATCAGCTCGAAATGACGCGAGCCGCTCGACGATTTCTTAGCAGCCATGGGTATTTGCCGTTGCGTCCTCGTTCGCTGAATTTCTGA
- Protein Sequence
- MNNDHLRRKSRSGYDSSSGGDSDNEYSGSVCRGVANQSQNPASTNASTHGQGKHINKGRWTKEEDALLKQLVSNAEQRGTGLRWDAVAGHFPDRSDVQCQQRWAKVVNPELVKGPWTKEEDEAVVELVERYGPKKWTLIARHLKGRIGKQCRERWHNHLNPGIKKTAWTEVEDRIIVEAHRRVGNQWAKIAKLLPGRTDNAIKNHWNSTMRRKYESEEGRSITGSRGRGRRKATESSSVSKDVGCADEDASSHGRLKPPSTSNENATSLTNVQAHTLNIDQLDWTRAWDNHQQSSQTYQGLLSLNQRTHNTDSRLQSPSKQGTSSTRVKTESISPFTKYFDLQIQGEPTSSRSSEIRLMPMPDLDEISNMAEKERSSPPPILRRRKNTHQQRTGSPDSGNQSDYIIITQHQPEQQHHQQQQQQEEQQQQQQQQQQQTGDNTPSTPIKQLPFSPSQFLNSLSPETSSWPRASTPKGSSPGPLTTPQPTGFRRSQNDGNTPRTPTPFKNALAELERRSGATTQLPATPSRLDALTEIIKQETDRESLAGTSAILQDSGYSTIRRRGKENSAPGGKRARKALCQAWANASQDNSEMSFVVETPSKSLDTSVLFSPASMALEDSFLTAGTSPVKTSHDFASVQRKPNAKRAITFDAFDSPCCILSPLPLRPVKRAKLQLEAQWTMVACGRTRDQLEMTRAARRFLSSHGYLPLRPRSLNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00229952;
- 90% Identity
- iTF_00360136;
- 80% Identity
- iTF_00360136;